Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.5e-197 692.6 342 100.0
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 9.5e-171 603.6 342 88.9
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.9e-155 552.7 341 80.6
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.6e-149 533.1 311 85.5
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 1.6e-149 533.1 337 78.9
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.6e-144 515.8 340 77.1
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 7.1e-142 507.7 339 74.9
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 2.1e-141 506.1 340 73.8
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 4.6e-141 505.0 337 75.1
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.1e-139 500.4 384 69.5
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.5e-139 499.2 339 73.5
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 2.5e-139 499.2 341 75.4
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 5.6e-139 498.0 338 74.9
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.2e-138 496.9 339 73.2
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.1e-138 496.1 339 72.9
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 3.6e-138 495.4 337 75.1
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.7e-138 495.0 335 76.1
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.7e-138 495.0 337 74.8
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.8e-137 493.0 340 73.5
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.4e-137 492.7 337 74.2
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 2.6e-136 489.2 336 75.0
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 5.8e-136 488.0 333 74.8
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 5.8e-136 488.0 337 73.0
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 9.9e-136 487.3 347 71.5
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 3.8e-135 485.3 332 72.9
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 8.4e-135 484.2 336 73.2
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.9e-134 483.0 285 82.8
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.9e-134 483.0 337 72.1
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 1.6e-133 479.9 394 66.0
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 2.7e-133 479.2 320 74.4
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 4.6e-133 478.4 336 72.6
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 3.0e-132 475.7 345 71.9
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 5.1e-132 474.9 340 71.2
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 5.1e-132 474.9 338 71.3
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 4.3e-131 471.9 335 71.3
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 4.3e-131 471.9 326 73.0
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 9.6e-131 470.7 346 71.1
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.2e-130 470.3 337 70.3
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.6e-130 469.9 337 71.8
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 4.7e-130 468.4 338 72.5
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.1e-129 467.2 341 71.3
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.4e-129 466.8 300 75.7
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.4e-129 466.1 346 70.2
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 3.1e-129 465.7 284 78.5
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 3.1e-129 465.7 340 70.3
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 5.2e-129 464.9 340 71.8
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 5.2e-129 464.9 340 72.1
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 6.9e-129 464.5 292 78.4
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 6.9e-129 464.5 341 70.7
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 9.0e-129 464.2 313 76.0
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.2e-128 463.8 342 68.7
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 4.4e-128 461.8 340 70.3
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.7e-127 459.9 339 71.1
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.9e-127 459.1 312 75.3
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 4.9e-127 458.4 336 68.5
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 2.4e-126 456.1 352 66.5
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 3.2e-126 455.7 341 69.2
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.4e-126 454.9 287 74.6
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.7e-125 452.6 344 67.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 6.0e-125 451.4 341 68.6
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.7e-124 449.9 367 63.8
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 2.3e-124 449.5 341 67.7
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 5.1e-124 448.4 284 76.4
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 5.6e-123 444.9 339 67.0
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 7.3e-123 444.5 302 72.5
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.3e-122 443.7 337 66.5
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 2.8e-122 442.6 339 66.1
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.8e-122 442.6 345 66.4
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 3.6e-122 442.2 341 66.0
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 6.2e-122 441.4 341 66.0
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.1e-121 440.7 339 66.4
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 1.1e-121 440.7 345 66.4
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.4e-121 439.5 288 74.3
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 5.3e-121 438.3 337 66.2
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 6.9e-121 438.0 314 69.4
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 6.9e-121 438.0 341 65.4
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 2.6e-120 436.0 404 59.2
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 2.9e-119 432.6 288 72.6
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 2.9e-119 432.6 340 65.9
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 8.4e-119 431.0 342 66.7
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.4e-118 429.5 299 72.6
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.6e-117 426.8 310 69.0
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 2.3e-116 422.9 311 68.2
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 5.6e-115 418.3 287 72.8
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 2.0e-112 409.8 311 67.8
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.7e-111 406.8 323 65.3
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 7.1e-110 401.4 337 63.2
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 4.6e-109 398.7 418 52.2
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 3.0e-108 396.0 318 62.6
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 3.9e-108 395.6 334 65.3
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 5.6e-107 391.7 263 70.3
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 2.8e-98 362.8 339 57.2
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 5.5e-94 348.6 291 57.0
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 9.3e-94 347.8 316 62.7
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 8.8e-92 341.3 345 55.9
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 2.2e-90 336.7 321 58.6
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.1e-89 334.3 256 60.9
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 3.6e-85 319.3 275 58.5
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 3.9e-84 315.8 259 56.0
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 2.8e-82 309.7 241 59.3
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.7e-77 292.4 277 56.7
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.0e-76 289.7 157 82.2
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 8.5e-71 271.6 218 62.8
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.3e-63 247.7 151 80.8
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 6.3e-58 228.8 163 71.8
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.2e-56 224.6 136 80.1
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 8.6e-55 218.4 271 44.3
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.2e-53 214.5 136 75.0
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.3e-52 210.3 285 44.9
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.3e-44 183.7 134 62.7
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 5.8e-43 179.1 97 86.6
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.6e-29 134.4 316 29.7
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 8.1e-29 132.1 256 34.4
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 3.4e-27 126.7 279 33.3
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 7.5e-27 125.6 85 72.9
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.0e-15 88.6 101 45.5
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 5.3e-12 76.3 103 42.7
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.3e-10 71.6 56 55.4


User provided reference genes

Program Settings