Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044429 Camellia sinensis var. sinensis HOM05D005267 ORTHO05D006303 3.4e-132 474.9 231 100.0
Actinidia37788 Actinidia chinensis HOM05D005267 ORTHO05D006303 5.9e-108 394.4 236 80.9
Rhsim03G0057300 Rhododendron simsii HOM05D005267 ORTHO05D006303 5.5e-98 361.3 244 75.0
Cc06_g07120 Coffea canephora HOM05D005267 ORTHO05D006303 2.8e-94 349.0 222 75.2
Solyc10g081590.2 Solanum lycopersicum HOM05D005267 ORTHO05D006303 1.3e-91 340.1 233 70.0
Sopen10g032100 Solanum pennellii HOM05D005267 ORTHO05D006303 2.2e-91 339.3 233 69.5
Nitab4.5_0008653g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 3.8e-91 338.6 239 70.7
PGSC0003DMG400028129 Solanum tuberosum HOM05D005267 ORTHO05D006303 3.8e-91 338.6 233 69.5
Cfa020104 Carpinus fangiana HOM05D005267 ORTHO05D006303 9.4e-90 334.0 245 68.6
Nitab4.5_0006454g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 1.2e-89 333.6 239 69.9
Oeu063094.3 Olea europaea HOM05D005267 ORTHO05D006303 2.7e-89 332.4 211 74.9
Atru.chr8.1242 Acer truncatum HOM05D005267 ORTHO05D006303 4.7e-89 331.6 238 69.3
Nn6g32442 Nelumbo nucifera HOM05D005267 ORTHO05D006303 2.3e-88 329.3 233 69.1
Medtr1g054315 Medicago truncatula HOM05D005267 ORTHO05D006303 4.0e-88 328.6 231 68.4
PGR142G1416 Punica granatum HOM05D005267 ORTHO05D006303 5.2e-88 328.2 240 67.9
MELO3C024594.2 Cucumis melo HOM05D005267 ORTHO05D006303 8.8e-88 327.4 219 71.7
Ca_18103_v3 Cicer arietinum L. HOM05D005267 ORTHO05D006303 1.5e-87 326.6 226 69.0
TAR623G0682 Trochodendron aralioides HOM05D005267 ORTHO05D006303 2.0e-87 326.2 237 67.9
Cpa.g.sc85.6 Carica papaya HOM05D005267 ORTHO05D006303 2.6e-87 325.9 223 70.9
Eucgr.A02521 Eucalyptus grandis HOM05D005267 ORTHO05D006303 3.4e-87 325.5 219 73.1
SGA_v2.0_scaffold41G15783 Striga asiatica HOM05D005267 ORTHO05D006303 3.4e-87 325.5 215 71.2
Thecc.05G181400 Theobroma cacao HOM05D005267 ORTHO05D006303 4.4e-87 325.1 238 68.9
COL.COLO4_29458 Corchorus olitorius HOM05D005267 ORTHO05D006303 7.5e-87 324.3 246 67.9
Haze_20086 Corylus avellana HOM05D005267 ORTHO05D006303 7.5e-87 324.3 245 66.5
CsaV3_6G041190 Cucumis sativus L. HOM05D005267 ORTHO05D006303 9.8e-87 323.9 225 71.1
Migut.L01860 Erythranthe guttata HOM05D005267 ORTHO05D006303 9.8e-87 323.9 233 67.4
Lalb_Chr02g0153991 Lupinus albus HOM05D005267 ORTHO05D006303 9.8e-87 323.9 214 72.4
ECA248G0309 Erigeron canadensis HOM05D005267 ORTHO05D006303 1.3e-86 323.6 234 67.5
HanXRQChr01g0026301 Helianthus annuus HOM05D005267 ORTHO05D006303 1.3e-86 323.6 219 70.8
Psat6g110480 Pisum sativum HOM05D005267 ORTHO05D006303 4.8e-86 321.6 214 70.6
TWI77G0597 Tripterygium wilfordii HOM05D005267 ORTHO05D006303 4.8e-86 321.6 239 65.3
Aqoxy1G00565 Aquilegia oxysepala HOM05D005267 ORTHO05D006303 6.3e-86 321.2 244 65.2
Ciclev10012610m.g Citrus clementina HOM05D005267 ORTHO05D006303 8.3e-86 320.9 242 65.3
GSVIVG01022470001 Vitis vinifera HOM05D005267 ORTHO05D006303 8.3e-86 320.9 200 74.0
arahy.Tifrunner.gnm1.ann1.H25EQ1 Arachis hypogaea HOM05D005267 ORTHO05D006303 1.8e-85 319.7 229 66.4
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 1.8e-85 319.7 222 68.5
ClCG01G015080 Citrullus lanatus HOM05D005267 ORTHO05D006303 2.4e-85 319.3 221 69.2
Glyma.09G103300 Glycine max HOM05D005267 ORTHO05D006303 3.1e-85 318.9 223 68.2
arahy.Tifrunner.gnm1.ann1.3RXG3F Arachis hypogaea HOM05D005267 ORTHO05D006303 4.1e-85 318.5 229 65.9
Lj5g0006264 Lotus japonicus HOM05D005267 ORTHO05D006303 4.1e-85 318.5 213 70.9
Lalb_Chr21g0316191 Lupinus albus HOM05D005267 ORTHO05D006303 5.4e-85 318.2 217 69.1
QL07p025833 Quercus lobata HOM05D005267 ORTHO05D006303 5.4e-85 318.2 248 65.7
TPR.G30771 Trifolium pratense HOM05D005267 ORTHO05D006303 5.4e-85 318.2 212 70.3
Duzib128G1921 Durio zibethinus HOM05D005267 ORTHO05D006303 7.0e-85 317.8 245 65.7
MBI05_g37655_MAGBIO Magnolia biondii HOM05D005267 ORTHO05D006303 7.0e-85 317.8 227 67.0
CiPaw.10G022300 Carya illinoinensis HOM05D005267 ORTHO05D006303 9.1e-85 317.4 222 69.8
Eucgr.A02526 Eucalyptus grandis HOM05D005267 ORTHO05D006303 2.7e-84 315.8 214 72.4
Glyma.02G167800 Glycine max HOM05D005267 ORTHO05D006303 3.5e-84 315.5 217 69.6
PSO384G1433 Papaver somniferum HOM05D005267 ORTHO05D006303 4.5e-84 315.1 243 64.6
Lj1A1066G52 Lonicera japonica HOM05D005267 ORTHO05D006303 1.0e-83 313.9 236 69.1
FAN02G1071 Fragaria x ananassa HOM05D005267 ORTHO05D006303 2.3e-83 312.8 221 67.4
Lsat_1_v5_gn_1_56341 Lactuca sativa HOM05D005267 ORTHO05D006303 2.3e-83 312.8 225 66.7
Potri.016G063600 Populus trichocarpa HOM05D005267 ORTHO05D006303 2.9e-83 312.4 219 70.3
FvH4_6g21270 Fragaria vesca HOM05D005267 ORTHO05D006303 1.1e-82 310.5 221 67.0
unitig_899.g15196 Utricularia gibba HOM05D005267 ORTHO05D006303 1.1e-82 310.5 215 67.4
RcHm_v2.0_Chr3g0477741 Rosa chinensis HOM05D005267 ORTHO05D006303 1.9e-82 309.7 216 67.1
RcHm_v2.0_Chr3g0477781 Rosa chinensis HOM05D005267 ORTHO05D006303 1.9e-82 309.7 216 67.1
FAN05G1850 Fragaria x ananassa HOM05D005267 ORTHO05D006303 2.5e-82 309.3 221 67.4
FAN14G1206 Fragaria x ananassa HOM05D005267 ORTHO05D006303 2.5e-82 309.3 221 66.5
CANSAT64G2985 Cannabis sativa HOM05D005267 ORTHO05D006303 9.5e-82 307.4 234 62.8
Prupe.7G087000 Prunus persica HOM05D005267 ORTHO05D006303 2.1e-81 306.2 222 66.2
Sabra16G0066000 Salix brachista HOM05D005267 ORTHO05D006303 2.1e-81 306.2 242 63.6
Sed0012434 Sechium edule HOM05D005267 ORTHO05D006303 2.1e-81 306.2 215 68.8
EL10Ac5g11779 Beta vulgaris HOM05D005267 ORTHO05D006303 1.4e-80 303.5 226 65.5
THA.LOC104821240 Tarenaya hassleriana HOM05D005267 ORTHO05D006303 3.0e-80 302.4 226 62.8
FAN05G5707 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.5e-79 300.1 235 63.0
MD14G1048200 Malus domestica HOM05D005267 ORTHO05D006303 9.8e-79 297.4 232 64.2
Phvul.007G264300 Phaseolus vulgaris HOM05D005267 ORTHO05D006303 2.8e-78 295.8 217 63.1
VMungo0720G2658 Vigna mungo HOM05D005267 ORTHO05D006303 1.1e-77 293.9 219 62.1
Os03g0749900 Oryza sativa ssp. japonica HOM05D005267 ORTHO05D006303 1.4e-77 293.5 230 63.9
Zm00001eb057270 Zea mays HOM05D005267 ORTHO05D006303 1.8e-77 293.1 235 62.1
AUR62036286 Chenopodium quinoa HOM05D005267 ORTHO05D006303 2.4e-77 292.7 231 63.6
Thhalv10006199m.g Eutrema salsugineum HOM05D005267 ORTHO05D006303 9.2e-77 290.8 227 63.4
Carub.0005s2521 Capsella rubella HOM05D005267 ORTHO05D006303 2.0e-76 289.7 231 62.3
CDE05G1441 Ceratophyllum demersum HOM05D005267 ORTHO05D006303 1.0e-75 287.3 210 65.2
AUR62039735 Chenopodium quinoa HOM05D005267 ORTHO05D006303 2.9e-75 285.8 258 58.1
BcaC07g40203 Brassica carinata HOM05D005267 ORTHO05D006303 3.8e-75 285.4 239 57.3
Sp5g04410 Schrenkiella parvula HOM05D005267 ORTHO05D006303 3.8e-75 285.4 227 61.2
AT3G58470 Arabidopsis thaliana HOM05D005267 ORTHO05D006303 5.0e-75 285.0 227 61.2
BraA09t40549Z Brassica rapa HOM05D005267 ORTHO05D006303 1.9e-74 283.1 220 61.4
CARHR168860 Cardamine hirsuta HOM05D005267 ORTHO05D006303 1.9e-74 283.1 227 59.9
Hund15032 Selenicereus undatus HOM05D005267 ORTHO05D006303 2.5e-74 282.7 220 65.5
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 7.3e-74 281.2 216 62.5
AL5G40230 Arabidopsis lyrata HOM05D005267 ORTHO05D006303 3.6e-73 278.9 227 60.4
Peaxi162Scf00060g01112 Petunia axillaris HOM05D005267 ORTHO05D006303 3.6e-73 278.9 219 64.8
BcaC07g40256 Brassica carinata HOM05D005267 ORTHO05D006303 1.4e-72 276.9 216 61.1
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 6.8e-72 274.6 229 59.4
Dinv11912 Davidia involucrata HOM05D005267 ORTHO05D006303 2.6e-71 272.7 214 66.4
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 1.9e-69 266.5 210 61.0
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 4.1e-69 265.4 210 60.5
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 1.2e-68 263.8 207 60.9
Gorai.006G146100 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.3e-66 255.8 250 56.4
Gohir.A09G131300 Gossypium hirsutum HOM05D005267 ORTHO05D006303 8.9e-64 247.7 228 57.0
vmacro07530 Vaccinium macrocarpon HOM05D005267 ORTHO05D006303 2.4e-61 239.6 132 84.1
Sc01g0005180 Simmondsia chinensis HOM05D005267 ORTHO05D006303 8.6e-59 231.1 196 62.2
Pp3c20_23410 Physcomitrium patens HOM05D005267 ORTHO05D006303 7.3e-58 228.0 234 50.0
Mapoly0207s0006 Marchantia polymorpha HOM05D005267 ORTHO05D006303 9.5e-58 227.6 224 50.4
CAN.G128.157 Capsicum annuum HOM05D005267 ORTHO05D006303 3.6e-57 225.7 128 78.9
Hund24299 Selenicereus undatus HOM05D005267 ORTHO05D006303 2.2e-54 216.5 128 76.6
Hund24301 Selenicereus undatus HOM05D005267 ORTHO05D006303 2.2e-54 216.5 128 76.6
Rhsim03G0057000 Rhododendron simsii HOM05D005267 ORTHO05D006303 9.2e-53 211.1 167 65.9
Zm00001eb155770 Zea mays HOM05D000737 ORTHO05D006303 1.3e-51 207.2 190 56.8
Zm00001eb307210 Zea mays HOM05D005267 ORTHO05D006303 6.2e-49 198.4 203 53.7
Gohir.D09G127600 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.5e-47 193.7 151 64.2
Gohir.D09G127100 Gossypium hirsutum HOM05D005267 ORTHO05D006303 4.4e-47 192.2 150 64.0
Manes.08G038900 Manihot esculenta HOM05D005267 ORTHO05D006303 4.9e-46 188.7 145 65.5
BcaC07g40255 Brassica carinata HOM05D005267 ORTHO05D006303 1.4e-45 187.2 182 52.7
CBR_g551 Chara braunii HOM05D005267 ORTHO05D006303 5.3e-40 168.7 255 35.7
Zm00001eb020160 Zea mays HOM05D005267 ORTHO05D006303 4.4e-39 165.6 104 71.2
BolC4t23005H Brassica oleracea HOM05D005267 ORTHO05D006303 4.2e-37 159.1 137 57.7
arahy.Tifrunner.gnm1.ann1.TFGA9S Arachis hypogaea HOM05D005267 ORTHO05D006303 3.5e-36 156.0 106 66.0
SEGI_05913 Sequoiadendron giganteum HOM05D005267 ORTHO05D006303 6.0e-36 155.2 160 50.6
Zm00001eb298070 Zea mays HOM05D005267 ORTHO05D006303 2.5e-34 149.8 135 54.8
AagrBONN_evm.TU.Sc2ySwM_344.4688 Anthoceros agrestis HOM05D005267 ORTHO05D006303 1.6e-33 147.1 152 46.1
C04p14160 Brassica napus HOM05D005267 ORTHO05D006303 1.7e-30 137.1 117 60.7
Gorai.011G111300 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.4e-29 134.0 77 79.2
Gorai.001G205400 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.2e-29 132.9 79 75.9
Gohir.D12G044850 Gossypium hirsutum HOM05D005267 ORTHO05D006303 4.2e-29 132.5 78 79.5
Gohir.D03G023232 Gossypium hirsutum HOM05D005267 ORTHO05D006303 9.3e-29 131.3 79 78.5
Gohir.A01G123000 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.6e-28 130.6 79 77.2
Gohir.A06G056200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.6e-28 130.6 79 77.2
Gorai.013G089700 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.6e-28 130.6 77 76.6
Gohir.D08G106200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.7e-28 129.8 78 78.2
Gohir.D11G259301 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.7e-28 129.8 78 78.2
Rhsim03G0056100 Rhododendron simsii HOM05D000045 ORTHO05D006303 2.1e-25 120.2 121 58.7
MSTRG.10424 Avicennia marina HOM05D005267 ORTHO05D006303 4.8e-25 119.0 88 65.9
Zm00001eb334640 Zea mays HOM05D005267 ORTHO05D006303 9.0e-24 114.8 68 73.5
Zm00001eb096050 Zea mays HOM05D005267 ORTHO05D006303 3.4e-23 112.8 132 50.8
arahy.Tifrunner.gnm1.ann1.74GVQ2 Arachis hypogaea HOM05D005267 ORTHO05D006303 1.0e-19 101.3 66 66.7
HPP92_004175 Vanilla planifolia HOM05D002029 ORTHO05D002158 5.6e-18 95.5 100 52.0
Gohir.D06G067600 Gossypium hirsutum HOM05D003508 ORTHO05D006303 1.6e-17 94.0 85 58.8
Gohir.D06G044601 Gossypium hirsutum HOM05D003508 ORTHO05D006303 9.0e-16 88.2 49 77.6
arahy.Tifrunner.gnm1.ann1.PYJ9JQ Arachis hypogaea HOM05D005267 ORTHO05D006303 2.0e-15 87.0 64 62.5
A04p02570 Brassica napus HOM05D005267 ORTHO05D006303 3.4e-15 86.3 73 54.8
BcaB02g08262 Brassica carinata HOM05D005267 ORTHO05D006303 4.5e-15 85.9 93 48.4
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 7.6e-15 85.1 62 64.5
arahy.Tifrunner.gnm1.ann1.HYSL0N Arachis hypogaea HOM05D005267 ORTHO05D006303 1.0e-14 84.7 52 69.2
Cfa022098 Carpinus fangiana HOM05D005267 ORTHO05D125748 1.0e-14 84.7 163 32.5
Glyma.03G214201 Glycine max HOM05D005267 ORTHO05D006303 1.3e-14 84.3 80 52.5
Gorai.011G067100 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.8e-14 82.8 51 70.6
VMungo0464G2161 Vigna mungo HOM05D005267 ORTHO05D006303 3.9e-11 72.8 53 50.9
Cre10.g418700 Chlamydomonas reinhardtii HOM05D005267 ORTHO05D006303 6.7e-11 72.0 176 29.0
Mapoly0004s0240 Marchantia polymorpha HOM05D005267 ORTHO05D006303 1.9e-10 70.5 169 26.6
MCO14G360 Micromonas commoda HOM05D005267 ORTHO05D006303 1.9e-10 70.5 163 26.4
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 4.3e-10 69.3 67 52.2
SMO143G0102 Selaginella moellendorffii HOM05D005267 ORTHO05D006303 1.6e-09 67.4 166 25.3
CBR_g49867 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-09 66.6 186 25.3
Pp3c20_11400 Physcomitrium patens HOM05D005267 ORTHO05D006303 4.8e-09 65.9 171 25.1
AagrBONN_evm.TU.Sc2ySwM_362.204 Anthoceros agrestis HOM05D005267 ORTHO05D006303 1.2e-07 61.2 130 30.0
Pp3c8_10880 Physcomitrium patens HOM05D005267 ORTHO05D006303 3.4e-07 59.7 206 21.8
arahy.Tifrunner.gnm1.ann1.4NE9EM Arachis hypogaea HOM05D005267 ORTHO05D006303 8.5e-06 55.1 34 61.8


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