Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 5.4e-102 374.4 198 100.0
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 5.4e-102 374.4 198 100.0
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 1.3e-84 316.6 198 82.8
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 7.3e-83 310.8 198 84.3
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 7.3e-83 310.8 197 84.3
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 9.6e-83 310.5 196 85.2
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 2.8e-82 308.9 198 82.8
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 1.8e-81 306.2 198 83.3
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 5.3e-81 304.7 199 81.9
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 6.9e-81 304.3 199 81.4
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 1.2e-80 303.5 199 80.9
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 8.4e-79 297.4 199 80.9
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 8.4e-79 297.4 197 80.2
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 8.4e-79 297.4 194 82.0
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 1.1e-78 297.0 198 81.8
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 1.2e-77 293.5 199 79.9
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 2.1e-77 292.7 197 79.2
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 2.1e-77 292.7 200 80.0
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 6.0e-77 291.2 200 79.5
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 6.0e-77 291.2 199 78.9
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 3.9e-76 288.5 192 78.6
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 5.1e-76 288.1 196 79.6
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 5.1e-76 288.1 197 78.2
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 6.6e-76 287.7 198 78.3
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 1.1e-75 287.0 198 76.8
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.5e-75 286.6 196 79.1
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 1.5e-75 286.6 198 77.3
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.5e-75 286.6 199 78.4
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 1.9e-75 286.2 199 77.9
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 2.5e-75 285.8 199 78.9
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 2.5e-75 285.8 196 78.6
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 3.3e-75 285.4 200 77.5
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 4.3e-75 285.0 194 78.9
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 4.3e-75 285.0 198 77.3
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 5.6e-75 284.6 196 78.6
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 5.6e-75 284.6 194 77.8
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 7.3e-75 284.3 198 76.8
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 7.3e-75 284.3 198 76.8
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 7.3e-75 284.3 198 76.8
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 7.3e-75 284.3 198 76.8
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 7.3e-75 284.3 198 77.8
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 9.6e-75 283.9 198 77.8
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 9.6e-75 283.9 194 77.8
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 9.6e-75 283.9 199 77.9
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 1.6e-74 283.1 198 77.3
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 2.1e-74 282.7 198 74.7
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 2.8e-74 282.3 199 77.4
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 3.6e-74 282.0 197 74.6
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 3.6e-74 282.0 198 76.3
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 3.6e-74 282.0 198 76.3
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.8e-74 281.6 198 77.3
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.8e-74 281.6 198 77.3
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 4.8e-74 281.6 199 77.4
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 4.8e-74 281.6 197 76.1
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 8.1e-74 280.8 200 76.5
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 8.1e-74 280.8 198 76.8
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.4e-73 280.0 194 76.3
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 1.4e-73 280.0 198 76.8
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.4e-73 280.0 198 76.8
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 1.4e-73 280.0 198 75.8
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 1.4e-73 280.0 198 73.2
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 1.8e-73 279.6 198 75.8
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 4.0e-73 278.5 162 90.1
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 9.0e-73 277.3 199 77.4
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 9.0e-73 277.3 198 75.3
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 9.0e-73 277.3 198 75.3
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 1.5e-72 276.6 197 75.6
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 2.6e-72 275.8 200 74.5
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 2.6e-72 275.8 191 75.9
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 2.6e-72 275.8 198 76.3
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 3.4e-72 275.4 198 72.7
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 3.4e-72 275.4 191 75.9
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 9.9e-72 273.9 191 75.9
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 1.1e-70 270.4 198 73.2
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.1e-70 270.4 198 74.7
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 1.1e-70 270.4 215 69.3
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 1.9e-70 269.6 200 74.5
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 3.2e-70 268.9 162 87.0
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 4.2e-70 268.5 191 77.0
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 4.2e-70 268.5 198 74.7
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 5.5e-70 268.1 199 71.9
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 1.2e-69 266.9 198 70.7
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 2.1e-69 266.2 201 71.6
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 3.5e-69 265.4 198 74.7
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 4.6e-69 265.0 202 73.8
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 6.0e-69 264.6 198 75.3
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 1.0e-68 263.8 198 73.2
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 1.3e-68 263.5 148 93.2
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 3.0e-68 262.3 198 73.2
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 3.9e-68 261.9 198 73.7
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 8.7e-68 260.8 166 80.7
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.5e-67 260.0 199 72.4
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 2.5e-67 259.2 201 72.6
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 5.6e-67 258.1 171 79.5
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 1.3e-66 256.9 194 72.2
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 1.8e-65 253.1 192 71.9
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 1.3e-63 246.9 147 88.4
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 1.9e-59 233.0 193 62.7
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 5.9e-48 194.9 166 57.8
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 1.9e-46 189.9 142 73.2
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 7.2e-46 188.0 203 47.3
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 7.4e-43 177.9 105 89.5
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 4.1e-41 172.2 157 54.8
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 5.3e-41 171.8 103 88.3
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 6.9e-41 171.4 168 51.8
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.6e-40 169.5 158 53.8
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.6e-40 169.5 158 53.8
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.6e-40 169.5 195 47.7
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 3.8e-39 165.6 159 51.6
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 3.2e-38 162.5 94 91.5
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 1.6e-37 160.2 103 84.5
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 6.7e-36 154.8 102 80.4
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 4.5e-32 142.1 118 68.6
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.0e-31 141.0 90 85.6
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 2.0e-27 126.7 94 73.4
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 2.8e-26 122.9 88 68.2
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 4.8e-26 122.1 71 90.1
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 3.5e-24 115.9 95 65.3
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 8.0e-21 104.8 157 36.3
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.5e-19 100.5 165 34.5
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 2.6e-19 99.8 88 64.8
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 2.7e-16 89.7 162 32.1
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 2.7e-16 89.7 85 54.1
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 2.7e-13 79.7 119 43.7
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 5.7e-11 72.0 156 32.7
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 7.5e-11 71.6 44 77.3
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 4.1e-09 65.9 64 50.0
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.3e-07 60.8 40 75.0


User provided reference genes

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