Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 1.1e-43 179.5 85 100.0
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 2.5e-32 141.7 77 89.6
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 1.9e-11 72.4 67 59.7
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 7.2e-11 70.5 62 53.2
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 7.2e-11 70.5 62 53.2
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 4.6e-10 67.8 70 51.4
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.0e-09 66.6 70 50.0
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 1.0e-09 66.6 71 53.5
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 1.4e-09 66.2 63 54.0
CAN.G1248.15 Capsicum annuum HOM05D002165 ORTHO05D001531 2.3e-09 65.5 76 47.4
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 5.1e-09 64.3 70 47.1
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 6.7e-09 63.9 70 57.1
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 6.7e-09 63.9 73 46.6
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.1e-08 63.2 73 49.3
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.1e-08 63.2 74 50.0
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.1e-08 63.2 73 49.3
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.1e-08 63.2 73 49.3
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 1.1e-08 63.2 74 48.6
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.5e-08 62.8 70 47.1
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 1.5e-08 62.8 71 52.1
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 7.4e-08 60.5 59 54.2
Eucgr.H01323 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.4e-08 60.5 60 46.7
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 7.4e-08 60.5 69 47.8
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 9.7e-08 60.1 72 45.8
PGSC0003DMG400018282 Solanum tuberosum HOM05D002165 ORTHO05D001531 1.3e-07 59.7 53 52.8
Lsat_1_v5_gn_7_63880 Lactuca sativa HOM05D002165 ORTHO05D001531 1.7e-07 59.3 68 45.6
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 1.7e-07 59.3 70 50.0
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 1.7e-07 59.3 68 44.1
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.8e-07 58.5 67 50.7
ECA240G3242 Erigeron canadensis HOM05D002165 ORTHO05D001531 2.8e-07 58.5 70 41.4
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.8e-07 58.5 68 45.6
Lsat_1_v5_gn_9_85041 Lactuca sativa HOM05D002165 ORTHO05D001531 2.8e-07 58.5 61 54.1
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 2.8e-07 58.5 74 45.9
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 2.8e-07 58.5 72 40.3
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 3.7e-07 58.2 61 52.5
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 3.7e-07 58.2 63 49.2
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 3.7e-07 58.2 71 45.1
Dinv30952 Davidia involucrata HOM05D002165 ORTHO05D001531 4.8e-07 57.8 58 48.3
Nitab4.5_0003573g0050 Nicotiana tabacum HOM05D002165 ORTHO05D001531 4.8e-07 57.8 64 48.4
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 4.8e-07 57.8 68 45.6
ECA240G3359 Erigeron canadensis HOM05D002165 ORTHO05D001531 6.3e-07 57.4 68 47.1
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 6.3e-07 57.4 70 44.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 6.3e-07 57.4 68 44.1
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 6.3e-07 57.4 68 44.1
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 6.3e-07 57.4 71 43.7
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 8.2e-07 57.0 72 52.8
ECA240G0021 Erigeron canadensis HOM05D002165 ORTHO05D001531 8.2e-07 57.0 63 49.2
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 8.2e-07 57.0 71 43.7
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 8.2e-07 57.0 69 46.4
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 1.1e-06 56.6 70 44.3
Eucgr.L03552 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.1e-06 56.6 67 43.3
ECA236G1383 Erigeron canadensis HOM05D002165 ORTHO05D001531 1.4e-06 56.2 61 49.2
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 1.4e-06 56.2 61 47.5
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 1.8e-06 55.8 69 46.4
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 1.8e-06 55.8 68 44.1
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.8e-06 55.8 68 44.1
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 1.8e-06 55.8 74 51.4
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 1.8e-06 55.8 73 46.6
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 1.8e-06 55.8 73 46.6
Oeu062790.1 Olea europaea HOM05D002165 ORTHO05D001531 1.8e-06 55.8 74 51.4
Ciclev10010714m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.4e-06 55.5 77 40.3
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 2.4e-06 55.5 68 48.5
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.4e-06 55.5 70 40.0
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 2.4e-06 55.5 68 45.6
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.1e-06 55.1 70 40.0
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 3.1e-06 55.1 67 52.2
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 3.1e-06 55.1 71 42.3
Rhsim05G0122900 Rhododendron simsii HOM05D002165 ORTHO05D001531 3.1e-06 55.1 63 50.8
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 4.1e-06 54.7 71 47.9
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 4.1e-06 54.7 70 44.3
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.1e-06 54.7 83 38.6
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 4.1e-06 54.7 73 43.8
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 5.3e-06 54.3 71 40.8
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 5.3e-06 54.3 71 43.7
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 5.3e-06 54.3 71 43.7
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 5.3e-06 54.3 74 45.9
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 5.3e-06 54.3 74 45.9
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 5.3e-06 54.3 71 40.8
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.9e-06 53.9 70 40.0
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.9e-06 53.9 70 40.0
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 6.9e-06 53.9 74 45.9
Lsat_1_v5_gn_7_63540 Lactuca sativa HOM05D002165 ORTHO05D001531 6.9e-06 53.9 68 41.2
Lsat_1_v5_gn_7_63581 Lactuca sativa HOM05D002165 ORTHO05D001531 6.9e-06 53.9 63 47.6
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 6.9e-06 53.9 70 48.6
Lsat_1_v5_gn_7_63620 Lactuca sativa HOM05D002165 ORTHO05D001531 9.1e-06 53.5 70 47.1
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 9.1e-06 53.5 64 45.3


User provided reference genes

Program Settings