Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0040588 Camellia sinensis var. sinensis HOM05D017135 ORTHO05D013817 9.4e-53 209.9 106 100.0
CSS0044380 Camellia sinensis var. sinensis HOM05D017135 ORTHO05D013817 9.4e-53 209.9 106 100.0
CSS0043002 Camellia sinensis var. sinensis HOM05D017135 ORTHO05D013817 1.2e-20 103.2 105 59.0
CSS0046962 Camellia sinensis var. sinensis HOM05D017135 ORTHO05D013817 1.2e-20 103.2 105 59.0
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.7e-17 92.8 105 48.6
DCAR_003096 Daucus carota HOM05D017135 ORTHO05D013817 1.8e-11 72.8 106 43.4
Potri.018G029600 Populus trichocarpa HOM05D017134 ORTHO05D013817 1.4e-08 63.2 75 50.7
Prupe.1G478300 Prunus persica HOM05D031942 ORTHO05D035448 1.4e-08 63.2 81 44.4
Potri.006G251751 Populus trichocarpa HOM05D017134 ORTHO05D013817 4.1e-08 61.6 83 47.0
GSVIVG01035828001 Vitis vinifera HOM05D017134 ORTHO05D013817 5.4e-08 61.2 89 47.2
TAR625G1243 Trochodendron aralioides HOM05D002549 ORTHO05D002755 7.1e-08 60.8 110 39.1
PGR044G0323 Punica granatum HOM05D017134 ORTHO05D013817 2.7e-07 58.9 82 41.5
Oeu063538.1 Olea europaea HOM05D002549 ORTHO05D002755 3.5e-07 58.5 106 41.5
TAR383G0202 Trochodendron aralioides HOM05D002549 ORTHO05D002755 4.6e-07 58.2 69 52.2
CiPaw.03G242300 Carya illinoinensis HOM05D002549 ORTHO05D002755 1.3e-06 56.6 116 37.9
Ciclev10010562m.g Citrus clementina HOM05D002549 ORTHO05D002755 1.3e-06 56.6 69 46.4
Oeu060159.1 Olea europaea HOM05D017135 ORTHO05D013817 1.7e-06 56.2 72 50.0
Eucgr.C01136 Eucalyptus grandis HOM05D002549 ORTHO05D002755 3.0e-06 55.5 116 37.9
COL.COLO4_00197 Corchorus olitorius HOM05D017134 ORTHO05D013817 3.9e-06 55.1 83 44.6
Migut.I00796 Erythranthe guttata HOM05D002549 ORTHO05D002755 3.9e-06 55.1 38 68.4
Aqoxy7G03731 Aquilegia oxysepala HOM05D002549 ORTHO05D002755 5.1e-06 54.7 63 49.2
Zm00001eb385630 Zea mays HOM05D002549 ORTHO05D002755 5.1e-06 54.7 105 33.3
Actinidia08809 Actinidia chinensis HOM05D002549 ORTHO05D002755 6.6e-06 54.3 105 38.1
SGA_v2.0_scaffold37G14785 Striga asiatica HOM05D002549 ORTHO05D002755 6.6e-06 54.3 37 70.3
Haze_25611 Corylus avellana HOM05D002549 ORTHO05D002755 8.6e-06 53.9 111 36.9
Lsat_1_v5_gn_5_30461 Lactuca sativa HOM05D017135 ORTHO05D013817 8.6e-06 53.9 83 41.0
MBI01_g37816_MAGBIO Magnolia biondii HOM05D002549 ORTHO05D002755 8.6e-06 53.9 69 47.8


User provided reference genes

Program Settings