Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044368 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 0.0e+00 1250.0 637 100.0
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 6.3e-136 488.8 336 75.3
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 3.1e-135 486.5 336 74.7
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 6.5e-133 478.8 336 74.1
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 7.5e-129 465.3 336 70.5
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 2.5e-124 450.3 336 69.3
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 8.3e-120 435.3 337 65.9
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.3e-117 427.2 337 65.6
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 3.1e-114 416.8 337 62.3
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 2.6e-113 413.7 334 64.4
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 5.8e-113 412.5 336 62.2
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 7.5e-113 412.1 336 60.4
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 2.2e-112 410.6 333 63.1
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 2.2e-112 410.6 338 60.9
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 6.4e-112 409.1 335 61.5
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 1.2e-110 404.8 336 61.6
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 1.7e-109 401.0 337 61.1
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 2.3e-109 400.6 337 61.1
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 1.1e-108 398.3 337 60.8
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 1.2e-107 394.8 338 60.9
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 2.8e-107 393.7 338 60.7
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 8.1e-107 392.1 333 61.6
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 1.4e-106 391.3 337 58.5
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 8.9e-106 388.7 336 57.7
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 1.2e-105 388.3 336 59.2
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 2.0e-105 387.5 336 58.9
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 7.5e-105 385.6 336 58.3
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 9.8e-105 385.2 337 58.8
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 1.7e-104 384.4 337 57.9
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 2.2e-104 384.0 337 57.6
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 8.3e-104 382.1 335 57.0
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 1.4e-103 381.3 336 58.6
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 3.2e-103 380.2 344 57.3
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 5.4e-103 379.4 333 55.9
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 7.1e-103 379.0 336 57.4
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 1.6e-102 377.9 337 57.6
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.6e-102 377.9 337 57.6
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.7e-102 377.1 337 57.6
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 2.7e-102 377.1 337 57.3
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 4.6e-102 376.3 336 56.8
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 1.3e-101 374.8 330 58.2
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.3e-101 374.8 337 57.6
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 2.3e-101 374.0 336 58.0
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.3e-101 374.0 337 57.3
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 3.9e-101 373.2 335 57.0
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 5.6e-100 369.4 337 54.9
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 6.2e-99 365.9 377 52.8
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 8.1e-99 365.5 336 57.1
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 5.2e-98 362.8 335 55.8
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 1.2e-97 361.7 337 54.3
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 3.4e-97 360.1 337 55.2
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 3.4e-97 360.1 336 56.2
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 8.4e-96 355.5 337 54.9
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 8.4e-96 355.5 337 54.9
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 1.1e-95 355.1 337 54.9
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 1.9e-95 354.4 341 53.7
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 2.4e-95 354.0 337 53.4
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 2.4e-95 354.0 353 53.0
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 4.1e-95 353.2 337 54.0
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 4.1e-95 353.2 341 54.0
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 4.1e-95 353.2 337 54.0
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 5.4e-95 352.8 338 55.6
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 5.4e-95 352.8 336 53.9
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 1.0e-93 348.6 338 55.0
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 1.7e-93 347.8 335 54.9
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 6.6e-93 345.9 338 54.7
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 4.3e-92 343.2 312 57.1
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 4.7e-91 339.7 332 51.8
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 8.1e-91 339.0 332 51.8
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 3.1e-90 337.0 337 51.6
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 3.4e-89 333.6 335 53.1
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 3.8e-88 330.1 396 47.2
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 2.4e-87 327.4 335 50.4
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 7.1e-87 325.9 333 51.1
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 1.3e-85 321.6 359 47.9
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 5.1e-85 319.7 343 49.0
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 1.9e-84 317.8 335 49.3
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 4.3e-84 316.6 335 48.7
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 3.6e-83 313.5 335 49.3
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 1.1e-82 312.0 335 48.4
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 1.8e-82 311.2 361 46.3
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 1.8e-82 311.2 335 48.4
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 3.1e-82 310.5 335 48.4
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 6.9e-82 309.3 335 47.8
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 9.0e-82 308.9 335 48.7
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 9.0e-82 308.9 335 48.4
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 9.0e-82 308.9 335 48.7
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 5.8e-81 306.2 327 51.1
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 3.0e-77 293.9 330 47.9
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 5.3e-74 283.1 264 55.3
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 9.0e-74 282.3 340 45.6
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 8.4e-72 275.8 339 45.7
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 1.1e-71 275.4 338 44.1
TAR624G0206 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.4e-71 274.2 286 53.8
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 2.7e-70 270.8 347 42.7
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 3.1e-66 257.3 345 44.9
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 3.8e-64 250.4 195 66.2
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 2.1e-59 234.6 326 40.8
Aa31sc1931G10 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.4e-58 231.9 262 46.9
Cpa.g.sc25.4 Carica papaya HOM05D002451 ORTHO05D005601 5.1e-53 213.4 160 63.1
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 3.3e-52 210.7 224 52.2
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 1.5e-49 201.8 367 35.7
Cpa.g.sc25.5 Carica papaya HOM05D002451 ORTHO05D005601 1.2e-46 192.2 176 57.4
Sc17g0002930 Simmondsia chinensis HOM05D002451 ORTHO05D005601 7.9e-46 189.5 180 57.8
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 1.4e-45 188.7 113 75.2
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 2.2e-43 181.4 346 33.5
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 4.1e-42 177.2 363 34.2
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 3.3e-36 157.5 186 48.9
Psat3g036640 Pisum sativum HOM05D002451 ORTHO05D005601 8.2e-35 152.9 173 48.6
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 2.9e-32 144.4 125 54.4
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 5.2e-29 133.7 274 39.1
Psat4g171400 Pisum sativum HOM05D002451 ORTHO05D005601 6.7e-29 133.3 123 56.1
CSS0046761 Camellia sinensis var. sinensis HOM05D058091 ORTHO05D005601 6.3e-27 126.7 144 54.9
CSS0028150 Camellia sinensis var. sinensis HOM05D058091 ORTHO05D005601 3.1e-26 124.4 141 59.6
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 3.5e-25 120.9 264 30.7
Zm00001eb320400 Zea mays HOM05D002451 ORTHO05D005601 4.4e-20 104.0 212 34.9
SHI11089 Sapria himalayana HOM05D002451 ORTHO05D005601 6.3e-19 100.1 88 53.4
A06p15140 Brassica napus HOM05D002451 ORTHO05D020166 1.6e-14 85.5 105 45.7
BraA06t24629Z Brassica rapa HOM05D002451 ORTHO05D020166 1.6e-14 85.5 105 45.7
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 2.1e-14 85.1 73 54.8
SGA_v2.0_scaffold123G33404 Striga asiatica HOM05D002451 ORTHO05D005601 3.6e-14 84.3 85 42.4
Cre13.g605050 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D005601 3.1e-10 71.2 143 30.8
CSS0015659 Camellia sinensis var. sinensis HOM05D002156 ORTHO05D005601 2.9e-08 64.7 58 67.2
SHI11090 Sapria himalayana HOM05D002451 ORTHO05D005601 5.0e-08 63.9 40 60.0
Medtr5g055460 Medicago truncatula HOM05D002451 ORTHO05D005601 3.3e-07 61.2 35 74.3
CSS0024787 Camellia sinensis var. sinensis HOM05D043049 ORTHO05D005601 2.1e-06 58.5 70 44.3
CSS0025899 Camellia sinensis var. sinensis HOM05D043049 ORTHO05D005601 2.1e-06 58.5 70 44.3


User provided reference genes

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