Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044355 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 7.5e-155 550.4 271 100.0
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 2.4e-116 422.5 306 73.9
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 1.5e-115 419.9 306 71.6
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 6.7e-111 404.4 306 69.3
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 1.1e-110 403.7 306 68.6
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 1.8e-108 396.4 306 67.6
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 2.4e-108 396.0 304 68.1
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 2.4e-108 396.0 309 68.0
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 2.0e-107 392.9 307 70.0
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 8.7e-103 377.5 306 65.0
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 1.0e-95 354.0 306 62.1
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 1.8e-95 353.2 306 62.4
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 1.8e-95 353.2 307 60.9
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 2.3e-95 352.8 306 60.1
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 3.0e-95 352.4 307 60.9
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 6.7e-95 351.3 306 62.7
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 1.1e-94 350.5 306 60.1
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 1.5e-94 350.1 306 61.8
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 4.3e-94 348.6 306 58.8
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 7.4e-94 347.8 306 59.2
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 8.2e-93 344.4 306 59.8
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 3.1e-92 342.4 306 60.5
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 4.1e-92 342.0 307 58.6
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 6.9e-92 341.3 306 59.5
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 1.2e-91 340.5 306 58.2
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 2.0e-91 339.7 306 58.5
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 2.6e-91 339.3 306 59.2
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 3.4e-91 339.0 306 59.8
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 3.4e-91 339.0 306 57.5
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 4.5e-91 338.6 306 56.9
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 1.7e-90 336.7 306 56.9
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 5.0e-90 335.1 355 53.8
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 6.5e-90 334.7 318 56.9
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 1.4e-89 333.6 307 57.3
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 1.4e-89 333.6 306 59.5
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 1.4e-89 333.6 306 58.2
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 9.4e-89 330.9 336 53.9
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 1.2e-88 330.5 306 56.2
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 3.6e-88 328.9 306 56.9
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 4.7e-88 328.6 309 57.9
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 6.1e-88 328.2 306 56.9
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 5.1e-87 325.1 308 56.8
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 2.0e-86 323.2 308 56.5
Manes.18G005201 Manihot esculenta HOM05D006313 ORTHO05D007853 2.0e-86 323.2 293 57.3
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 2.6e-86 322.8 306 56.2
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 5.7e-86 321.6 306 55.9
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 9.7e-86 320.9 338 53.0
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 9.7e-86 320.9 341 53.1
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 2.4e-84 316.2 306 54.2
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 3.1e-84 315.8 306 55.6
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 5.3e-84 315.1 317 53.9
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 7.0e-84 314.7 306 55.6
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 7.0e-84 314.7 306 58.2
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 1.2e-83 313.9 307 55.7
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 1.5e-83 313.5 307 54.4
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 1.3e-82 310.5 306 53.9
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 1.3e-82 310.5 306 53.9
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 2.2e-82 309.7 306 54.9
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 2.9e-82 309.3 306 54.6
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 3.8e-82 308.9 306 55.2
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 5.0e-82 308.5 306 52.9
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 8.5e-82 307.8 304 54.3
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 1.9e-81 306.6 308 54.2
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 3.2e-81 305.8 306 52.9
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 3.2e-81 305.8 306 53.6
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 5.5e-81 305.1 284 59.5
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 1.2e-80 303.9 306 53.3
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 1.2e-80 303.9 306 53.9
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 1.2e-80 303.9 306 53.9
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 2.1e-80 303.1 306 52.3
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 2.7e-80 302.8 306 51.3
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 2.7e-80 302.8 306 53.3
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 1.0e-79 300.8 308 52.6
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 1.8e-79 300.1 308 52.3
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 2.3e-79 299.7 308 52.6
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 2.3e-79 299.7 306 51.6
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 8.8e-79 297.7 306 50.0
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 1.1e-78 297.4 308 52.3
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 3.3e-78 295.8 308 51.3
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 5.7e-78 295.0 306 51.0
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 7.4e-78 294.7 308 51.3
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 1.3e-77 293.9 349 47.3
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 1.1e-76 290.8 357 46.2
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 3.1e-76 289.3 309 51.1
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 3.1e-76 289.3 309 51.1
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 3.1e-76 289.3 308 51.3
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 2.6e-75 286.2 307 51.8
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 1.5e-73 280.4 388 45.4
Cfa012651 Carpinus fangiana HOM05D006313 ORTHO05D007853 2.5e-73 279.6 314 51.6
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 3.2e-73 279.3 307 51.5
Zm00001eb379580 Zea mays HOM05D006313 ORTHO05D007853 3.2e-73 279.3 306 49.7
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 7.2e-73 278.1 287 52.6
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 3.6e-72 275.8 309 49.5
SEGI_26691 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 5.7e-70 268.5 323 47.1
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.7e-69 266.9 307 49.8
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 2.4e-68 263.1 272 50.0
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 2.4e-68 263.1 307 49.8
FvH4_2g37320 Fragaria vesca HOM05D006313 ORTHO05D007853 7.2e-57 224.9 240 52.5
Sabra05G0194400 Salix brachista HOM05D006313 ORTHO05D007853 8.9e-55 218.0 236 51.3
Sc02g0009110 Simmondsia chinensis HOM05D006313 ORTHO05D007853 6.3e-53 211.8 190 58.9
COL.COLO4_05223 Corchorus olitorius HOM05D006313 ORTHO05D007853 2.4e-52 209.9 238 51.3
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 3.3e-49 199.5 323 37.5
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 4.0e-47 192.6 326 38.7
TPR.G38702 Trifolium pratense HOM05D006313 ORTHO05D007853 1.7e-45 187.2 239 45.6
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 1.1e-44 184.5 320 36.9
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 1.9e-44 183.7 327 36.4
TPR.G21513 Trifolium pratense HOM05D006313 ORTHO05D007853 1.2e-22 111.3 69 73.9
Solyc04g082420.3 Solanum lycopersicum HOM05D006313 ORTHO05D007853 4.7e-16 89.4 60 75.0
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 9.9e-14 81.6 68 54.4
Sc02g0009120 Simmondsia chinensis HOM05D006313 ORTHO05D007853 2.1e-11 73.9 61 65.6
SEGI_14381 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 6.6e-10 68.9 100 43.0
Os05g0345500 Oryza sativa ssp. japonica HOM05D006313 ORTHO05D007853 1.6e-08 64.3 60 53.3


User provided reference genes

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