Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044296 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D014695 2.1e-181 639.0 356 100.0
CSS0042319 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 1.0e-82 311.2 217 84.8
CSS0009862 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 2.9e-82 309.7 245 83.3
CSS0017432 Camellia sinensis var. sinensis HOM05D028273 ORTHO05D005886 1.2e-59 234.6 241 70.1
CSS0039970 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 7.5e-54 215.3 111 92.8
CSS0022799 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 8.6e-50 201.8 118 84.7
CSS0007717 Camellia sinensis var. sinensis HOM05D018314 ORTHO05D014695 8.9e-47 191.8 167 61.1
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.8e-16 89.7 158 35.4
RcHm_v2.0_Chr1g0341871 Rosa chinensis HOM05D005012 ORTHO05D005886 2.3e-10 70.9 50 60.0
RcHm_v2.0_Chr7g0230481 Rosa chinensis HOM05D005012 ORTHO05D005886 2.3e-10 70.9 50 60.0
CSS0038015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-10 69.3 64 51.6
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 6.7e-10 69.3 50 58.0
CSS0035156 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 1.1e-09 68.6 91 51.6
Rhsim01G0079300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.1e-09 68.6 279 22.2
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.9e-09 67.8 64 51.6
CSS0041386 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D000089 1.9e-09 67.8 91 50.5
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 2.5e-09 67.4 137 29.9
CSS0019574 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.7e-09 66.2 64 50.0
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 7.4e-09 65.9 55 58.2
CSS0022677 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.6e-09 65.5 64 50.0
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.6e-09 65.5 64 50.0
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 9.6e-09 65.5 125 31.2
CSS0004182 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-08 65.1 62 50.0
CSS0044969 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.3e-08 65.1 64 50.0
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-08 64.3 57 52.6
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-08 64.3 57 52.6
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-08 64.3 57 52.6
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-08 64.3 57 52.6
CSS0033025 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-08 64.3 57 52.6
CSS0033950 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-08 64.3 57 52.6
CSS0041327 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-08 64.3 57 52.6
CSS0041437 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-08 64.3 57 52.6
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.8e-08 63.9 64 48.4
CSS0000891 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.8e-08 63.2 57 50.9
FvH4_4g09791 Fragaria vesca HOM05D000107 ORTHO05D000062 4.8e-08 63.2 55 49.1
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.3e-08 62.8 50 52.0
CSS0010423 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.2e-08 62.4 64 48.4
FAN12G0378 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.2e-08 62.4 55 49.1
FAN28G1702 Fragaria x ananassa HOM05D005012 ORTHO05D005886 8.2e-08 62.4 49 53.1
FAN04G2636 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.1e-07 62.0 57 43.9
FAN25G0106 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.1e-07 62.0 57 43.9
Rhsim05G0024300 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.4e-07 61.6 56 37.5
Rhsim05G0034600 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.4e-07 61.6 56 37.5
Hma1.2p1_0435F.1_g152400 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 2.4e-07 60.8 87 42.5
Hma1.2p1_0435F.1_g152390 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 3.1e-07 60.5 90 40.0
FvH4_4g09832 Fragaria vesca HOM05D005012 ORTHO05D005886 6.9e-07 59.3 55 47.3
Rhsim01G0079900 Rhododendron simsii HOM05D005012 ORTHO05D005886 9.0e-07 58.9 56 35.7
CSS0007280 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-06 58.5 58 43.1
Rhsim07G0167600 Rhododendron simsii HOM05D005012 ORTHO05D005886 1.2e-06 58.5 52 42.3
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.5e-06 58.2 49 49.0
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-06 58.2 56 35.7
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.0e-06 57.8 70 41.4
CSS0040728 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.6e-06 57.4 58 41.4
FvH4_1g28181 Fragaria vesca HOM05D005012 ORTHO05D005886 5.9e-06 56.2 50 48.0
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.9e-06 56.2 63 42.9
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.9e-06 56.2 63 42.9
CSS0035704 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 7.6e-06 55.8 58 41.4
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.6e-06 55.8 43 51.2
CSS0030618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.0e-05 55.5 52 44.2


User provided reference genes

Program Settings