Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044280 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 3.2e-68 261.5 126 100.0
CSS0034530 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 7.0e-63 243.8 119 98.3
vmacro10037 Vaccinium macrocarpon HOM05D007537 ORTHO05D009602 1.7e-48 196.1 121 77.7
CSS0047961 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 2.2e-48 195.7 118 81.4
CSS0001440 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 4.9e-48 194.5 118 82.2
Actinidia13942 Actinidia chinensis HOM05D007537 ORTHO05D009602 6.4e-48 194.1 125 76.0
Rhsim09G0177700 Rhododendron simsii HOM05D007537 ORTHO05D009602 7.0e-47 190.7 121 77.7
TAR633G2636 Trochodendron aralioides HOM05D007537 ORTHO05D009602 3.2e-39 165.2 120 65.0
Peaxi162Scf00284g01051 Petunia axillaris HOM05D007537 ORTHO05D009602 1.6e-38 162.9 118 63.6
Haze_17238 Corylus avellana HOM05D007537 ORTHO05D009602 4.6e-38 161.4 124 64.5
DCAR_011821 Daucus carota HOM05D007537 ORTHO05D009602 7.8e-38 160.6 121 61.2
Glyma.02G257900 Glycine max HOM05D007537 ORTHO05D009602 7.8e-38 160.6 119 63.0
Cfa001307 Carpinus fangiana HOM05D007537 ORTHO05D009602 3.0e-37 158.7 122 63.9
Thecc.10G014900 Theobroma cacao HOM05D007537 ORTHO05D009602 3.0e-37 158.7 119 63.0
Duzib114G0965 Durio zibethinus HOM05D007537 ORTHO05D009602 3.9e-37 158.3 121 62.0
Prupe.2G251400 Prunus persica HOM05D007537 ORTHO05D009602 2.5e-36 155.6 121 65.3
COL.COLO4_25746 Corchorus olitorius HOM05D007537 ORTHO05D009602 3.3e-36 155.2 118 63.6
Lsat_1_v5_gn_8_12620 Lactuca sativa HOM05D007537 ORTHO05D009602 4.3e-36 154.8 122 62.3
GSVIVG01032801001 Vitis vinifera HOM05D007537 ORTHO05D009602 9.5e-36 153.7 120 60.0
VMungo0647G0018 Vigna mungo HOM05D007537 ORTHO05D009602 3.6e-35 151.8 117 61.5
Nitab4.5_0000797g0160 Nicotiana tabacum HOM05D007537 ORTHO05D009602 6.2e-35 151.0 123 63.4
Cc02_g06360 Coffea canephora HOM05D007537 ORTHO05D009602 8.1e-35 150.6 121 59.5
PSO384G1417 Papaver somniferum HOM05D007537 ORTHO05D009602 8.1e-35 150.6 124 61.3
Solyc06g051360.3 Solanum lycopersicum HOM05D007537 ORTHO05D009602 3.1e-34 148.7 121 59.5
RcHm_v2.0_Chr1g0370441 Rosa chinensis HOM05D007537 ORTHO05D009602 5.2e-34 147.9 127 60.6
Dinv21742 Davidia involucrata HOM05D007537 ORTHO05D009602 6.8e-34 147.5 93 75.3
CiPaw.01G299800 Carya illinoinensis HOM05D007537 ORTHO05D009602 1.2e-33 146.7 121 62.0
HanXRQChr08g0221761 Helianthus annuus HOM05D007537 ORTHO05D009602 1.2e-33 146.7 122 63.9
PGSC0003DMG400024236 Solanum tuberosum HOM05D007537 ORTHO05D009602 1.2e-33 146.7 121 58.7
Ciclev10031789m.g Citrus clementina HOM05D007537 ORTHO05D009602 2.0e-33 146.0 120 57.5
Nn2g10869 Nelumbo nucifera HOM05D007537 ORTHO05D009602 2.0e-33 146.0 120 58.3
Sopen06g017350 Solanum pennellii HOM05D007537 ORTHO05D009602 2.6e-33 145.6 121 58.7
Phvul.008G223100 Phaseolus vulgaris HOM05D007537 ORTHO05D009602 3.4e-33 145.2 119 56.3
FvH4_7g24610 Fragaria vesca HOM05D007537 ORTHO05D009602 5.8e-33 144.4 128 57.8
Aqoxy2G00863 Aquilegia oxysepala HOM05D007537 ORTHO05D009602 9.9e-33 143.7 124 58.9
Lalb_Chr04g0250531 Lupinus albus HOM05D007537 ORTHO05D009602 9.9e-33 143.7 121 58.7
FAN06G1236 Fragaria x ananassa HOM05D007537 ORTHO05D009602 1.7e-32 142.9 128 57.0
THA.LOC104823184 Tarenaya hassleriana HOM05D007537 ORTHO05D009602 2.2e-32 142.5 120 58.3
Nitab4.5_0008231g0020 Nicotiana tabacum HOM05D007537 ORTHO05D009602 3.7e-32 141.7 124 59.7
Sabra08G0051400 Salix brachista HOM05D007537 ORTHO05D009602 3.7e-32 141.7 119 58.0
Gorai.013G017500 Gossypium raimondii HOM05D007537 ORTHO05D009602 4.9e-32 141.4 121 58.7
arahy.Tifrunner.gnm1.ann1.EU49LP Arachis hypogaea HOM05D007537 ORTHO05D009602 1.4e-31 139.8 122 59.0
FAN03G1922 Fragaria x ananassa HOM05D007537 ORTHO05D009602 1.9e-31 139.4 129 57.4
MBI03_g40958_MAGBIO Magnolia biondii HOM05D007537 ORTHO05D009602 1.9e-31 139.4 127 58.3
FAN01G2979 Fragaria x ananassa HOM05D007537 ORTHO05D009602 2.4e-31 139.0 129 56.6
FAN10G0956 Fragaria x ananassa HOM05D007537 ORTHO05D009602 3.2e-31 138.7 129 56.6
ECA233G1171 Erigeron canadensis HOM05D007537 ORTHO05D009602 4.1e-31 138.3 122 56.6
Manes.07G130900 Manihot esculenta HOM05D007537 ORTHO05D009602 4.1e-31 138.3 120 55.8
Ca_05971_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 9.2e-31 137.1 125 57.6
Ca_05972_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 9.2e-31 137.1 125 57.6
Eucgr.J00197 Eucalyptus grandis HOM05D007537 ORTHO05D009602 1.2e-30 136.7 125 58.4
Gohir.A13G014800 Gossypium hirsutum HOM05D007537 ORTHO05D009602 1.2e-30 136.7 123 58.5
Thhalv10020993m.g Eutrema salsugineum HOM05D007537 ORTHO05D009602 1.6e-30 136.3 119 56.3
Sp3g09450 Schrenkiella parvula HOM05D007537 ORTHO05D009602 2.1e-30 136.0 119 55.5
arahy.Tifrunner.gnm1.ann1.QLS93X Arachis hypogaea HOM05D007537 ORTHO05D009602 4.6e-30 134.8 124 57.3
Psat2g031640 Pisum sativum HOM05D007537 ORTHO05D009602 6.0e-30 134.4 123 56.9
Gohir.D13G016000 Gossypium hirsutum HOM05D007537 ORTHO05D009602 7.8e-30 134.0 116 58.6
TPR.G38413 Trifolium pratense HOM05D007537 ORTHO05D009602 7.8e-30 134.0 124 56.5
LjContig00357g0012610 Lotus japonicus HOM05D007537 ORTHO05D009602 1.0e-29 133.7 122 59.0
Medtr5g082850 Medicago truncatula HOM05D007537 ORTHO05D009602 1.0e-29 133.7 119 57.1
BcaC09g48157 Brassica carinata HOM05D007537 ORTHO05D009602 1.7e-29 132.9 119 54.6
MELO3C026792.2 Cucumis melo HOM05D007537 ORTHO05D009602 1.7e-29 132.9 121 57.0
BolC1t05333H Brassica oleracea HOM05D007537 ORTHO05D009602 3.9e-29 131.7 119 53.8
Migut.F00693 Erythranthe guttata HOM05D007537 ORTHO05D009602 5.1e-29 131.3 118 59.3
BcaB04g21148 Brassica carinata HOM05D007537 ORTHO05D009602 8.6e-29 130.6 119 54.6
Potri.008G069800 Populus trichocarpa HOM05D007537 ORTHO05D009602 8.6e-29 130.6 122 54.1
BcaB04g21146 Brassica carinata HOM05D007537 ORTHO05D009602 2.5e-28 129.0 119 53.8
AL3G22670 Arabidopsis lyrata HOM05D007537 ORTHO05D009602 9.6e-28 127.1 119 56.3
SGA_v2.0_scaffold44G16701 Striga asiatica HOM05D007537 ORTHO05D009602 1.2e-27 126.7 119 54.6
MSTRG.27338 Avicennia marina HOM05D007537 ORTHO05D009602 2.8e-27 125.6 119 55.5
AT3G11150 Arabidopsis thaliana HOM05D007537 ORTHO05D009602 3.6e-27 125.2 119 54.6
CsaV3_5G010250 Cucumis sativus L. HOM05D007537 ORTHO05D009602 4.7e-27 124.8 121 51.2
Ah.10g036610 Amaranthus hybridus HOM05D007537 ORTHO05D009602 1.4e-26 123.2 126 53.2
ClCG07G004310 Citrullus lanatus HOM05D007537 ORTHO05D009602 1.8e-26 122.9 123 50.4
Hund13875 Selenicereus undatus HOM05D007537 ORTHO05D009602 3.1e-26 122.1 118 55.9
Sed0013636 Sechium edule HOM05D007537 ORTHO05D009602 1.2e-25 120.2 122 50.0
Aa31LG3G4310 Aethionema arabicum HOM05D007537 ORTHO05D009602 1.5e-25 119.8 120 51.7
CARHR085730 Cardamine hirsuta HOM05D007537 ORTHO05D009602 7.6e-25 117.5 119 52.1
Carub.0003s1045 Capsella rubella HOM05D007537 ORTHO05D009602 3.8e-24 115.2 119 51.3
AUR62012265 Chenopodium quinoa HOM05D007537 ORTHO05D009602 8.4e-24 114.0 129 49.6
AUR62022900 Chenopodium quinoa HOM05D007537 ORTHO05D009602 8.4e-24 114.0 124 52.4
PGR044G1397 Punica granatum HOM05D007537 ORTHO05D009602 3.2e-23 112.1 130 50.8
Sc10g0002440 Simmondsia chinensis HOM05D007537 ORTHO05D009602 1.5e-20 103.2 119 45.4
BraA01t04198Z Brassica rapa HOM05D007537 ORTHO05D009602 9.6e-20 100.5 89 52.8
MD01G1154400 Malus domestica HOM05D007537 ORTHO05D009602 2.1e-14 82.8 62 66.1
Oeu004692.1 Olea europaea HOM05D007537 ORTHO05D009602 7.4e-12 74.3 88 50.0
ATR0681G199 Amborella trichopoda HOM05D007537 ORTHO05D009602 6.9e-10 67.8 121 39.7
EL10Ac2g04847 Beta vulgaris HOM05D007537 ORTHO05D009602 1.7e-08 63.2 52 55.8
HPP92_007582 Vanilla planifolia HOM05D007537 ORTHO05D009602 2.4e-07 59.3 117 35.9


User provided reference genes

Program Settings