Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.7e-96 354.0 176 100.0
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.7e-96 354.0 176 100.0
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.0e-80 301.6 150 100.0
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.5e-74 282.3 179 82.7
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 3.9e-51 205.3 126 78.6
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.9e-50 203.0 126 75.4
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 1.8e-48 196.4 126 76.2
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.6e-47 192.6 126 77.8
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 5.4e-45 184.9 149 63.1
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 4.7e-41 171.8 127 66.9
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 1.1e-40 170.6 129 64.3
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 2.3e-40 169.5 126 65.9
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 4.0e-40 168.7 125 67.2
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 6.8e-40 167.9 126 66.7
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 2.0e-39 166.4 125 65.6
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 3.4e-39 165.6 126 60.3
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 4.9e-38 161.8 126 64.3
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 1.1e-37 160.6 126 60.3
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 1.4e-37 160.2 126 59.5
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 1.4e-37 160.2 126 60.3
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 2.4e-37 159.5 126 61.1
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 3.2e-37 159.1 125 62.4
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 3.2e-37 159.1 125 64.0
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 4.1e-37 158.7 125 61.6
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 4.1e-37 158.7 126 62.7
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 2.7e-36 156.0 126 63.5
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 3.5e-36 155.6 126 62.7
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 4.6e-36 155.2 125 60.8
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 6.0e-36 154.8 125 60.0
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 6.6e-35 151.4 125 59.2
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 8.6e-35 151.0 126 57.1
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 2.5e-34 149.4 127 58.3
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 2.5e-34 149.4 125 57.6
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 2.5e-34 149.4 125 58.4
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 2.5e-34 149.4 126 58.7
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 5.6e-34 148.3 124 61.3
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 5.6e-34 148.3 99 72.7
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 7.3e-34 147.9 124 61.3
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 7.3e-34 147.9 125 60.0
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 9.5e-34 147.5 125 56.8
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 1.2e-33 147.1 125 58.4
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 2.1e-33 146.4 125 56.8
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.1e-33 146.4 123 61.0
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 2.8e-33 146.0 127 55.1
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 4.7e-33 145.2 125 56.0
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.7e-33 145.2 123 60.2
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 8.1e-33 144.4 125 56.0
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 8.1e-33 144.4 125 58.4
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 1.1e-32 144.1 126 56.3
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 1.8e-32 143.3 126 61.1
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 1.8e-32 143.3 125 57.6
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 2.4e-32 142.9 137 54.0
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 6.8e-32 141.4 125 56.8
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 6.8e-32 141.4 125 53.6
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 8.9e-32 141.0 126 55.6
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 2.6e-31 139.4 127 53.5
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.4e-31 139.0 124 58.9
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 3.4e-31 139.0 125 55.2
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 5.8e-31 138.3 126 53.2
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 5.8e-31 138.3 125 58.4
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 1.3e-30 137.1 125 57.6
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 1.3e-30 137.1 125 56.8
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 2.2e-30 136.3 155 49.7
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 4.9e-30 135.2 125 56.0
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 6.4e-30 134.8 136 47.8
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.4e-30 134.4 129 54.3
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 8.4e-30 134.4 129 54.3
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 1.1e-29 134.0 126 54.0
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.1e-29 134.0 125 56.0
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 1.9e-29 133.3 126 54.0
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 3.2e-29 132.5 126 52.4
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 7.1e-29 131.3 125 55.2
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 6.0e-28 128.3 108 53.7
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 6.0e-28 128.3 118 55.9
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 7.8e-28 127.9 125 52.8
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 1.3e-27 127.1 96 60.4
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 2.3e-27 126.3 126 52.4
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 1.1e-26 124.0 127 52.0
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 2.5e-26 122.9 127 51.2
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 2.5e-26 122.9 125 52.0
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 2.5e-26 122.9 125 55.2
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 2.5e-26 122.9 91 68.1
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 5.6e-26 121.7 126 50.8
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 1.6e-25 120.2 132 49.2
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 2.1e-25 119.8 87 65.5
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 2.4e-24 116.3 76 76.3
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 3.1e-24 115.9 125 49.6
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 4.0e-24 115.5 125 50.4
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 4.0e-24 115.5 125 50.4
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 4.0e-24 115.5 125 50.4
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 1.2e-23 114.0 125 49.6
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 1.2e-23 114.0 125 49.6
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 1.5e-23 113.6 125 46.4
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 4.9e-22 108.6 126 46.8
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 8.4e-22 107.8 142 43.0
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 2.5e-18 96.3 139 39.6
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 1.3e-17 94.0 116 43.1
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 5.8e-15 85.1 74 56.8
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 7.6e-15 84.7 126 39.7
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 4.2e-13 79.0 123 37.4
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.6e-12 77.0 93 46.2
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 6.0e-12 75.1 72 51.4
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 7.9e-12 74.7 107 42.1
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 1.8e-08 63.5 126 35.7
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 5.3e-08 62.0 92 38.0
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 8.4e-06 54.7 128 28.1


User provided reference genes

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