Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044174 Camellia sinensis var. sinensis HOM05D000193 ORTHO05D033945 3.0e-34 147.9 73 100.0
CSS0018422 Camellia sinensis var. sinensis HOM05D000193 ORTHO05D000402 2.0e-33 145.2 71 100.0
RhsimUnG0044000 Rhododendron simsii HOM05D000193 ORTHO05D000402 4.7e-11 70.9 71 59.2
Dinv07529 Davidia involucrata HOM05D000193 ORTHO05D000402 1.0e-10 69.7 71 57.7
vmacro03845 Vaccinium macrocarpon HOM05D000193 ORTHO05D000402 7.5e-09 63.5 71 56.3
CiPaw.04G124800 Carya illinoinensis HOM05D000193 ORTHO05D000402 1.7e-08 62.4 81 48.1
Duzib248G0874 Durio zibethinus HOM05D000193 ORTHO05D000402 2.4e-07 58.5 78 48.7
Cfa014586 Carpinus fangiana HOM05D000193 ORTHO05D000402 3.2e-07 58.2 81 45.7
DCAR_004111 Daucus carota HOM05D000193 ORTHO05D000402 3.2e-07 58.2 71 56.3
Lsat_1_v5_gn_8_131981 Lactuca sativa HOM05D000193 ORTHO05D000402 3.2e-07 58.2 76 50.0
Manes.13G148000 Manihot esculenta HOM05D000193 ORTHO05D000402 3.2e-07 58.2 78 46.2
Lj1A727T52 Lonicera japonica HOM05D000193 ORTHO05D000402 4.1e-07 57.8 73 50.7
Actinidia11047 Actinidia chinensis HOM05D000193 ORTHO05D000402 5.4e-07 57.4 67 50.7
Migut.H01068 Erythranthe guttata HOM05D000193 ORTHO05D000402 5.4e-07 57.4 78 43.6
MD17G1244000 Malus domestica HOM05D000193 ORTHO05D000402 5.4e-07 57.4 72 51.4
CSS0018837 Camellia sinensis var. sinensis HOM05D000193 ORTHO05D000402 7.0e-07 57.0 71 47.9
CSS0028476 Camellia sinensis var. sinensis HOM05D000193 ORTHO05D000402 7.0e-07 57.0 71 47.9
Cc05_g06980 Coffea canephora HOM05D000193 ORTHO05D000402 7.0e-07 57.0 67 49.3
Duzib160G0660 Durio zibethinus HOM05D000193 ORTHO05D000402 9.2e-07 56.6 74 52.7
HanXRQChr17g0564401 Helianthus annuus HOM05D000193 ORTHO05D000402 9.2e-07 56.6 76 50.0
Aqoxy4G01172 Aquilegia oxysepala HOM05D000193 ORTHO05D000402 1.2e-06 56.2 78 46.2
Cc01_g05650 Coffea canephora HOM05D000193 ORTHO05D033945 1.2e-06 56.2 67 49.3
Prupe.3G156900 Prunus persica HOM05D000193 ORTHO05D000402 1.2e-06 56.2 79 46.8
arahy.Tifrunner.gnm1.ann1.8K3X8B Arachis hypogaea HOM05D000193 ORTHO05D000402 1.6e-06 55.8 76 50.0
CANSAT78G2466 Cannabis sativa HOM05D000193 ORTHO05D000402 1.6e-06 55.8 81 44.4
DCAR_012997 Daucus carota HOM05D000193 ORTHO05D000402 1.6e-06 55.8 79 46.8
Lj1A1208G45 Lonicera japonica HOM05D000193 ORTHO05D000402 1.6e-06 55.8 70 47.1
PGSC0003DMG400022377 Solanum tuberosum HOM05D000193 ORTHO05D000402 1.6e-06 55.8 73 47.9
Lsat_1_v5_gn_3_39141 Lactuca sativa HOM05D000193 ORTHO05D000402 2.0e-06 55.5 83 44.6
CAN.G1627.20 Capsicum annuum HOM05D000193 ORTHO05D000402 2.7e-06 55.1 75 50.7
ClCG02G017540 Citrullus lanatus HOM05D000193 ORTHO05D000402 2.7e-06 55.1 71 47.9
Nn1g04006 Nelumbo nucifera HOM05D000193 ORTHO05D000402 2.7e-06 55.1 80 48.8
TWI63G0070 Tripterygium wilfordii HOM05D000193 ORTHO05D000402 2.7e-06 55.1 73 49.3
TWI75G1080 Tripterygium wilfordii HOM05D000193 ORTHO05D000402 2.7e-06 55.1 71 46.5
Cpa.g.sc1028.2 Carica papaya HOM05D000193 ORTHO05D000402 3.5e-06 54.7 76 50.0
RcHm_v2.0_Chr5g0007771 Rosa chinensis HOM05D000193 ORTHO05D000402 3.5e-06 54.7 75 50.7
Hma1.2p1_1201F.1_g266750 Hydrangea macrophylla HOM05D000193 ORTHO05D000402 4.6e-06 54.3 78 42.3
Nitab4.5_0003668g0010 Nicotiana tabacum HOM05D000193 ORTHO05D000402 4.6e-06 54.3 70 50.0
Nitab4.5_0028651g0010 Nicotiana tabacum HOM05D000193 ORTHO05D000402 4.6e-06 54.3 71 49.3
Oeu029920.1 Olea europaea HOM05D000193 ORTHO05D000402 4.6e-06 54.3 71 43.7
Sopen02g023460 Solanum pennellii HOM05D000193 ORTHO05D000402 4.6e-06 54.3 71 50.7
Thecc.02G177100 Theobroma cacao HOM05D000193 ORTHO05D000402 4.6e-06 54.3 78 43.6
CSS0011955 Camellia sinensis var. sinensis HOM05D000193 ORTHO05D000402 6.0e-06 53.9 71 46.5
CSS0042235 Camellia sinensis var. sinensis HOM05D000193 ORTHO05D000402 6.0e-06 53.9 71 46.5
FAN25G0517 Fragaria x ananassa HOM05D000193 ORTHO05D000402 6.0e-06 53.9 75 50.7
PGR042G1929 Punica granatum HOM05D000193 ORTHO05D000402 6.0e-06 53.9 59 54.2
QL08p038265 Quercus lobata HOM05D000193 ORTHO05D000402 6.0e-06 53.9 71 43.7
Solyc02g078600.3 Solanum lycopersicum HOM05D000193 ORTHO05D000402 6.0e-06 53.9 71 50.7


User provided reference genes

Program Settings