Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044105 Camellia sinensis var. sinensis HOM05D000958 ORTHO05D000786 5.7e-36 153.7 75 100.0
CSS0021745 Camellia sinensis var. sinensis HOM05D000958 ORTHO05D000786 7.2e-15 83.6 69 65.2
CSS0030041 Camellia sinensis var. sinensis HOM05D000958 ORTHO05D000786 8.8e-13 76.6 67 62.7
CSS0044085 Camellia sinensis var. sinensis HOM05D000958 ORTHO05D000786 8.8e-13 76.6 67 62.7
CSS0016467 Camellia sinensis var. sinensis HOM05D000958 ORTHO05D000786 3.4e-12 74.7 74 59.5
CSS0025297 Camellia sinensis var. sinensis HOM05D000958 ORTHO05D000786 3.4e-12 74.7 74 59.5
CSS0032144 Camellia sinensis var. sinensis HOM05D000958 ORTHO05D000786 3.4e-12 74.7 74 59.5
Actinidia40031 Actinidia chinensis HOM05D000958 ORTHO05D000786 5.7e-12 73.9 68 55.9
Actinidia05258 Actinidia chinensis HOM05D000958 ORTHO05D000786 1.7e-11 72.4 69 58.0
Hma1.2p1_0205F.1_g087540 Hydrangea macrophylla HOM05D000958 ORTHO05D000786 6.3e-11 70.5 71 57.7
Oeu014958.2 Olea europaea HOM05D000958 ORTHO05D000786 1.1e-10 69.7 68 51.5
Thecc.05G057800 Theobroma cacao HOM05D000958 ORTHO05D000786 1.4e-10 69.3 72 54.2
Rhsim05G0182200 Rhododendron simsii HOM05D000958 ORTHO05D000786 2.4e-10 68.6 65 60.0
TAR623G1263 Trochodendron aralioides HOM05D000958 ORTHO05D000786 2.4e-10 68.6 67 55.2
TAR633G2057 Trochodendron aralioides HOM05D000958 ORTHO05D000786 4.5e-09 64.3 67 52.2
vmacro08720 Vaccinium macrocarpon HOM05D000958 ORTHO05D000786 7.7e-09 63.5 70 52.9
Duzib106G1336 Durio zibethinus HOM05D000958 ORTHO05D000786 2.2e-08 62.0 72 48.6
GSVIVG01025673001 Vitis vinifera HOM05D000958 ORTHO05D000786 2.2e-08 62.0 68 52.9
CiPaw.09G177200 Carya illinoinensis HOM05D000958 ORTHO05D000786 2.9e-08 61.6 69 55.1
Peaxi162Scf00182g00112 Petunia axillaris HOM05D000958 ORTHO05D000786 3.8e-08 61.2 71 49.3
Cc06_g03850 Coffea canephora HOM05D000958 ORTHO05D000786 5.0e-08 60.8 69 46.4
Prupe.6G238100 Prunus persica HOM05D000958 ORTHO05D000786 5.0e-08 60.8 71 52.1
Atru.chr8.1878 Acer truncatum HOM05D000958 ORTHO05D000786 1.5e-07 59.3 66 51.5
COL.COLO4_27039 Corchorus olitorius HOM05D000958 ORTHO05D000786 1.5e-07 59.3 68 50.0
ECA238G3444 Erigeron canadensis HOM05D000958 ORTHO05D000786 1.9e-07 58.9 66 48.5
Haze_20610 Corylus avellana HOM05D000958 ORTHO05D000786 2.5e-07 58.5 70 48.6
QL01p022338 Quercus lobata HOM05D000958 ORTHO05D000786 2.5e-07 58.5 67 49.3
TPR.G15530 Trifolium pratense HOM05D000958 ORTHO05D000786 2.5e-07 58.5 69 46.4
Ca_05254_v3 Cicer arietinum L. HOM05D000958 ORTHO05D000786 3.2e-07 58.2 70 48.6
Manes.08G006100 Manihot esculenta HOM05D000958 ORTHO05D000786 3.2e-07 58.2 73 50.7
Ca_13653_v3 Cicer arietinum L. HOM05D000958 ORTHO05D000786 5.5e-07 57.4 69 46.4
Nitab4.5_0005150g0030 Nicotiana tabacum HOM05D000958 ORTHO05D000786 5.5e-07 57.4 68 47.1
Duzib093G1740 Durio zibethinus HOM05D000958 ORTHO05D000786 7.2e-07 57.0 71 46.5
VMungo0720G0411 Vigna mungo HOM05D000958 ORTHO05D000786 7.2e-07 57.0 69 50.7
Hma1.2p1_1031F.1_g250000 Hydrangea macrophylla HOM05D000958 ORTHO05D000786 9.4e-07 56.6 51 52.9
PSO339G4144 Papaver somniferum HOM05D000958 ORTHO05D000786 9.4e-07 56.6 66 40.9
Solyc09g007680.4 Solanum lycopersicum HOM05D000958 ORTHO05D000786 9.4e-07 56.6 71 46.5
Sopen09g002570 Solanum pennellii HOM05D000958 ORTHO05D000786 9.4e-07 56.6 71 46.5
PGSC0003DMG400001776 Solanum tuberosum HOM05D000958 ORTHO05D000786 9.4e-07 56.6 71 46.5
Glyma.13G139200 Glycine max HOM05D000958 ORTHO05D000786 1.2e-06 56.2 70 50.0
Gohir.A05G102400 Gossypium hirsutum HOM05D000958 ORTHO05D000786 1.2e-06 56.2 73 42.5
Gohir.D05G102100 Gossypium hirsutum HOM05D000958 ORTHO05D000786 1.2e-06 56.2 73 42.5
Gorai.009G106300 Gossypium raimondii HOM05D000958 ORTHO05D000786 1.2e-06 56.2 73 42.5
Haze_23840 Corylus avellana HOM05D000958 ORTHO05D000786 1.6e-06 55.8 66 45.5
Migut.J00554 Erythranthe guttata HOM05D000958 ORTHO05D000786 1.6e-06 55.8 68 45.6
arahy.Tifrunner.gnm1.ann1.8GSN0E Arachis hypogaea HOM05D000958 ORTHO05D000786 2.1e-06 55.5 54 59.3
arahy.Tifrunner.gnm1.ann1.VIK0YT Arachis hypogaea HOM05D000958 ORTHO05D000786 2.1e-06 55.5 54 59.3
Lj2A111T61 Lonicera japonica HOM05D000958 ORTHO05D000786 2.1e-06 55.5 69 50.7
arahy.Tifrunner.gnm1.ann1.IW12TT Arachis hypogaea HOM05D000958 ORTHO05D000786 2.7e-06 55.1 69 49.3
CAN.G888.11 Capsicum annuum HOM05D000958 ORTHO05D000786 2.7e-06 55.1 71 45.1
DCAR_009291 Daucus carota HOM05D000958 ORTHO05D000786 2.7e-06 55.1 67 47.8
Nitab4.5_0000101g0050 Nicotiana tabacum HOM05D000958 ORTHO05D000786 2.7e-06 55.1 68 44.1
vmacro03195 Vaccinium macrocarpon HOM05D000958 ORTHO05D000786 2.7e-06 55.1 67 49.3
PSO063G0287 Papaver somniferum HOM05D000958 ORTHO05D000786 3.6e-06 54.7 67 44.8
HanXRQChr07g0195591 Helianthus annuus HOM05D000958 ORTHO05D000786 4.7e-06 54.3 69 44.9
PSO339G5119 Papaver somniferum HOM05D000958 ORTHO05D000786 4.7e-06 54.3 65 44.6
Cpa.g.sc226.3 Carica papaya HOM05D000958 ORTHO05D000786 6.1e-06 53.9 68 44.1
FAN02G1349 Fragaria x ananassa HOM05D000958 ORTHO05D000786 6.1e-06 53.9 69 47.8
arahy.Tifrunner.gnm1.ann1.0990KC Arachis hypogaea HOM05D000958 ORTHO05D000786 8.0e-06 53.5 69 47.8
Gohir.A08G197300 Gossypium hirsutum HOM05D000958 ORTHO05D000786 8.0e-06 53.5 69 42.0
Lsat_1_v5_gn_2_108761 Lactuca sativa HOM05D000958 ORTHO05D000786 8.0e-06 53.5 66 48.5
Nn2g10778 Nelumbo nucifera HOM05D000958 ORTHO05D000786 8.0e-06 53.5 67 46.3
PSO384G0883 Papaver somniferum HOM05D000958 ORTHO05D000786 8.0e-06 53.5 66 39.4


User provided reference genes

Program Settings