Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 2.3e-58 228.8 122 100.0
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 2.3e-58 228.8 122 100.0
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 8.0e-48 193.7 122 82.8
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 1.2e-43 179.9 123 78.0
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.2e-43 179.9 123 78.9
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 3.5e-43 178.3 124 77.4
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 3.5e-43 178.3 122 75.4
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 7.8e-43 177.2 123 74.8
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.3e-42 176.4 123 76.4
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 1.7e-42 176.0 120 72.5
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 1.7e-42 176.0 123 77.2
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 3.9e-42 174.9 122 73.0
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 5.1e-42 174.5 122 73.0
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 6.6e-42 174.1 103 83.5
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.9e-41 172.6 122 73.0
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 1.9e-41 172.6 122 73.0
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 2.5e-41 172.2 107 79.4
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 2.5e-41 172.2 122 72.1
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 4.3e-41 171.4 118 72.9
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 4.3e-41 171.4 122 73.0
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 4.3e-41 171.4 103 79.6
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 5.6e-41 171.0 122 71.3
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 5.6e-41 171.0 122 71.3
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 7.3e-41 170.6 103 80.6
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 7.3e-41 170.6 103 80.6
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 7.3e-41 170.6 123 75.6
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 7.3e-41 170.6 123 75.6
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 7.3e-41 170.6 123 75.6
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 9.5e-41 170.2 122 72.1
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.2e-40 169.9 123 75.6
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.6e-40 169.5 122 71.3
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.6e-40 169.5 124 74.2
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 1.6e-40 169.5 123 74.8
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.1e-40 169.1 122 67.2
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.8e-40 168.7 123 75.6
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 3.6e-40 168.3 122 68.0
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 4.7e-40 167.9 123 73.2
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 6.2e-40 167.5 122 68.0
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 6.2e-40 167.5 123 74.0
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 6.2e-40 167.5 103 78.6
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 8.1e-40 167.2 126 73.8
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.8e-39 166.0 122 71.3
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 3.1e-39 165.2 122 69.7
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 3.1e-39 165.2 122 65.6
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 3.1e-39 165.2 123 66.7
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 4.0e-39 164.9 115 70.4
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 5.2e-39 164.5 122 70.5
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 6.8e-39 164.1 125 69.6
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 8.9e-39 163.7 123 70.7
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 8.9e-39 163.7 124 71.8
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 2.0e-38 162.5 124 72.6
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 2.0e-38 162.5 123 70.7
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 2.6e-38 162.2 104 74.0
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 2.6e-38 162.2 121 67.8
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 3.4e-38 161.8 81 92.6
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 3.4e-38 161.8 118 68.6
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 5.8e-38 161.0 128 67.2
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 7.6e-38 160.6 120 65.0
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 7.6e-38 160.6 81 91.4
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 9.9e-38 160.2 117 67.5
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 1.3e-37 159.8 82 90.2
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 1.7e-37 159.5 82 89.0
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.7e-37 159.5 125 67.2
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 2.2e-37 159.1 120 66.7
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 2.2e-37 159.1 103 73.8
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 2.9e-37 158.7 116 69.0
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 3.7e-37 158.3 126 69.0
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 3.7e-37 158.3 126 69.0
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 3.7e-37 158.3 126 69.0
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 3.7e-37 158.3 126 69.0
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 3.7e-37 158.3 120 66.7
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 6.4e-37 157.5 120 65.8
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 6.4e-37 157.5 120 65.8
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 8.3e-37 157.1 132 66.7
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 8.3e-37 157.1 103 76.7
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 8.3e-37 157.1 103 77.7
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 1.1e-36 156.8 120 65.8
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 1.1e-36 156.8 120 65.8
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 1.1e-36 156.8 120 65.8
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 1.1e-36 156.8 121 66.9
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 5.4e-36 154.5 103 73.8
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 5.4e-36 154.5 129 65.9
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 7.1e-36 154.1 120 65.8
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 1.6e-35 152.9 81 88.9
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 6.0e-35 151.0 123 64.2
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 1.0e-34 150.2 112 71.4
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 5.2e-31 137.9 83 77.1
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 5.4e-28 127.9 129 58.1
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 3.5e-27 125.2 99 58.6
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 7.8e-27 124.0 80 78.8
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 1.0e-26 123.6 103 56.3
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 2.1e-24 115.9 106 51.9
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 4.8e-24 114.8 102 59.8
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 4.8e-24 114.8 100 50.0
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 8.1e-24 114.0 82 72.0
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 3.1e-23 112.1 97 58.8
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 3.8e-21 105.1 60 83.3
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 2.5e-17 92.4 77 51.9
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 7.9e-11 70.9 80 36.2
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 7.9e-11 70.9 62 59.7
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 1.8e-07 59.7 101 31.7


User provided reference genes

Program Settings