Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044059 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 8.5e-154 547.0 276 100.0
CSS0042510 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.7e-149 532.7 269 99.6
CSS0002926 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 2.0e-147 525.8 269 98.5
CSS0039738 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.4e-145 519.6 278 95.3
vmacro12300 Vaccinium macrocarpon HOM05D001108 ORTHO05D005418 1.3e-114 416.8 271 78.6
Rhsim06G0142500 Rhododendron simsii HOM05D001108 ORTHO05D005418 3.0e-106 389.0 273 76.9
Haze_21052 Corylus avellana HOM05D001108 ORTHO05D001619 7.0e-100 367.9 270 71.5
HanXRQChr06g0171321 Helianthus annuus HOM05D001108 ORTHO05D005418 1.0e-98 364.0 275 71.6
TAR627G0387 Trochodendron aralioides HOM05D001108 ORTHO05D005418 5.0e-98 361.7 274 69.7
QL08p038694 Quercus lobata HOM05D001108 ORTHO05D005418 7.3e-97 357.8 273 70.7
Ciclev10013903m.g Citrus clementina HOM05D001108 ORTHO05D005418 1.6e-96 356.7 264 70.8
CAN.G248.33 Capsicum annuum HOM05D001108 ORTHO05D005418 2.8e-96 355.9 270 70.4
Solyc07g054190.4 Solanum lycopersicum HOM05D001108 ORTHO05D005418 6.2e-96 354.8 270 71.5
EL10Ac9g20764 Beta vulgaris HOM05D001108 ORTHO05D005418 1.4e-95 353.6 269 67.7
Cpa.g.sc34.160 Carica papaya HOM05D001108 ORTHO05D005418 1.4e-95 353.6 270 69.6
Sopen07g028120 Solanum pennellii HOM05D001108 ORTHO05D005418 1.8e-95 353.2 270 71.1
HanXRQChr06g0171311 Helianthus annuus HOM05D001108 ORTHO05D005418 7.5e-94 347.8 274 67.9
Hund07929 Selenicereus undatus HOM05D001108 ORTHO05D005418 7.5e-94 347.8 260 68.8
MD09G1247800 Malus domestica HOM05D001108 ORTHO05D005418 2.2e-93 346.3 262 68.7
Nn1g04079 Nelumbo nucifera HOM05D001108 ORTHO05D005418 2.2e-93 346.3 206 84.0
TWI75G0959 Tripterygium wilfordii HOM05D001108 ORTHO05D005418 2.2e-93 346.3 280 66.1
Lsat_1_v5_gn_4_70021 Lactuca sativa HOM05D001108 ORTHO05D005418 2.9e-93 345.9 247 71.7
Atru.chr6.2997 Acer truncatum HOM05D001108 ORTHO05D005418 3.7e-93 345.5 272 70.6
Ah.01g015170 Amaranthus hybridus HOM05D001108 ORTHO05D005418 4.9e-93 345.1 218 79.4
AUR62019549 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.1e-92 344.0 267 65.9
PSO675G3815 Papaver somniferum HOM05D001108 ORTHO05D005418 3.2e-92 342.4 272 66.5
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 3.2e-92 342.4 269 66.9
PSO478G1555 Papaver somniferum HOM05D001108 ORTHO05D005418 4.1e-92 342.0 272 67.3
Nitab4.5_0000512g0050 Nicotiana tabacum HOM05D001108 ORTHO05D005418 5.4e-92 341.7 271 66.8
PSO541G4613 Papaver somniferum HOM05D001108 ORTHO05D005418 5.4e-92 341.7 272 66.2
Thecc.05G172000 Theobroma cacao HOM05D001108 ORTHO05D005418 5.4e-92 341.7 271 67.5
Lsat_1_v5_gn_3_37280 Lactuca sativa HOM05D001108 ORTHO05D005418 7.1e-92 341.3 271 67.5
CiPaw.04G125800 Carya illinoinensis HOM05D001108 ORTHO05D005418 9.2e-92 340.9 270 68.1
Sc21g0002830 Simmondsia chinensis HOM05D001108 ORTHO05D005418 9.2e-92 340.9 261 69.0
Prupe.3G137500 Prunus persica HOM05D001108 ORTHO05D005418 1.2e-91 340.5 269 66.2
COL.COLO4_33977 Corchorus olitorius HOM05D001108 ORTHO05D005418 6.0e-91 338.2 271 67.2
Gohir.A09G128300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 7.8e-91 337.8 248 70.2
PSO782G4551 Papaver somniferum HOM05D001108 ORTHO05D005418 7.8e-91 337.8 272 66.5
AUR62036092 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.0e-90 337.4 264 64.8
EL10Ac4g08320 Beta vulgaris HOM05D001108 ORTHO05D005418 1.3e-90 337.0 239 70.3
MD17G1240700 Malus domestica HOM05D001108 ORTHO05D005418 1.7e-90 336.7 228 74.6
CANSAT80G2367 Cannabis sativa HOM05D001108 ORTHO05D005418 3.0e-90 335.9 259 68.3
Nitab4.5_0004071g0020 Nicotiana tabacum HOM05D001108 ORTHO05D005418 5.1e-90 335.1 215 77.2
Migut.C01348 Erythranthe guttata HOM05D001108 ORTHO05D005418 6.6e-90 334.7 271 67.9
Gohir.D09G124300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 1.9e-89 333.2 249 69.5
Lalb_Chr03g0029441 Lupinus albus HOM05D001108 ORTHO05D005418 4.3e-89 332.0 259 66.8
Duzib093G1006 Durio zibethinus HOM05D001108 ORTHO05D005418 9.5e-89 330.9 270 68.1
Gorai.006G143100 Gossypium raimondii HOM05D001108 ORTHO05D005418 1.2e-88 330.5 249 69.1
CAN.G248.11 Capsicum annuum HOM05D001108 ORTHO05D005418 4.7e-88 328.6 199 79.9
Manes.13G146800 Manihot esculenta HOM05D001108 ORTHO05D005418 4.7e-88 328.6 273 66.3
Nn1g06569 Nelumbo nucifera HOM05D001108 ORTHO05D005418 4.7e-88 328.6 228 73.7
VMungo1127G1775 Vigna mungo HOM05D001108 ORTHO05D005418 6.2e-88 328.2 264 67.0
SalBow1G0161 Salvia bowleyana HOM05D001108 ORTHO05D005418 1.1e-87 327.4 260 68.1
MSTRG.5628 Avicennia marina HOM05D001108 ORTHO05D005418 1.4e-87 327.0 268 66.4
Potri.013G131800 Populus trichocarpa HOM05D001108 ORTHO05D005418 1.4e-87 327.0 268 66.8
Potri.019G100500 Populus trichocarpa HOM05D001108 ORTHO05D005418 1.4e-87 327.0 275 65.1
Cpa.g.sc34.159 Carica papaya HOM05D001108 ORTHO05D005418 6.8e-87 324.7 269 62.5
Medtr0004s0220 Medicago truncatula HOM05D001108 ORTHO05D005418 4.4e-86 322.0 238 69.7
RcHm_v2.0_Chr7g0232111 Rosa chinensis HOM05D001108 ORTHO05D005418 7.6e-86 321.2 269 64.3
Sabra19G0110800 Salix brachista HOM05D001108 ORTHO05D005418 9.9e-86 320.9 274 64.6
Sabra19G0112200 Salix brachista HOM05D001108 ORTHO05D005418 9.9e-86 320.9 274 64.6
unitig_60.g25406 Utricularia gibba HOM05D001108 ORTHO05D005418 2.2e-85 319.7 274 65.3
Ca_20056_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 2.9e-85 319.3 239 69.9
Sabra13G0111300 Salix brachista HOM05D001108 ORTHO05D005418 3.8e-85 318.9 267 65.9
DCAR_013007 Daucus carota HOM05D001108 ORTHO05D005418 4.9e-85 318.5 192 82.3
Cc05_g07130 Coffea canephora HOM05D001108 ORTHO05D005418 1.4e-84 317.0 191 82.7
ClCG02G017630 Citrullus lanatus HOM05D001108 ORTHO05D005418 1.9e-84 316.6 266 65.0
Lj3g0011439 Lotus japonicus HOM05D001108 ORTHO05D005418 1.9e-84 316.6 268 62.7
Sed0006413 Sechium edule HOM05D001108 ORTHO05D005418 5.4e-84 315.1 271 63.5
arahy.Tifrunner.gnm1.ann1.85LIYI Arachis hypogaea HOM05D001108 ORTHO05D005418 9.2e-84 314.3 280 63.6
CsaV3_6G012940 Cucumis sativus L. HOM05D001108 ORTHO05D005418 1.6e-83 313.5 271 62.7
THA.LOC104824701 Tarenaya hassleriana HOM05D001108 ORTHO05D005418 1.6e-83 313.5 207 78.3
AUR62002952 Chenopodium quinoa HOM05D001108 ORTHO05D005418 2.1e-83 313.2 226 72.1
PGSC0003DMG400018350 Solanum tuberosum HOM05D001108 ORTHO05D005418 3.5e-83 312.4 191 81.2
HPP92_003131 Vanilla planifolia HOM05D001108 ORTHO05D005418 3.5e-83 312.4 230 68.7
Aqoxy1G02437 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 4.6e-83 312.0 270 61.9
Glyma.12G112900 Glycine max HOM05D001108 ORTHO05D005418 4.6e-83 312.0 198 79.8
Cfa017142 Carpinus fangiana HOM05D001108 ORTHO05D005418 6.0e-83 311.6 191 81.7
PGR142G4253 Punica granatum HOM05D001108 ORTHO05D005418 6.0e-83 311.6 268 64.6
Haze_13157 Corylus avellana HOM05D001108 ORTHO05D005418 7.8e-83 311.2 191 82.2
Phvul.011G114100 Phaseolus vulgaris HOM05D001108 ORTHO05D005418 7.8e-83 311.2 263 64.3
CsaV3_6G013000 Cucumis sativus L. HOM05D001108 ORTHO05D005418 1.0e-82 310.8 266 63.5
FAN18G0425 Fragaria x ananassa HOM05D001108 ORTHO05D005418 1.0e-82 310.8 263 65.8
FAN04G2154 Fragaria x ananassa HOM05D001108 ORTHO05D005418 1.3e-82 310.5 259 65.6
BcaB03g16863 Brassica carinata HOM05D001108 ORTHO05D005418 1.7e-82 310.1 212 75.9
arahy.Tifrunner.gnm1.ann1.SGC5R3 Arachis hypogaea HOM05D001108 ORTHO05D005418 2.3e-82 309.7 280 63.9
arahy.Tifrunner.gnm1.ann1.PPEG78 Arachis hypogaea HOM05D001108 ORTHO05D005418 3.0e-82 309.3 283 62.9
CARHR111330 Cardamine hirsuta HOM05D001108 ORTHO05D005418 3.9e-82 308.9 252 64.7
Eucgr.K01017 Eucalyptus grandis HOM05D001108 ORTHO05D005418 3.9e-82 308.9 240 69.6
FvH4_5g33380 Fragaria vesca HOM05D001108 ORTHO05D005418 3.9e-82 308.9 236 69.1
Thhalv10002078m.g Eutrema salsugineum HOM05D001108 ORTHO05D005418 5.1e-82 308.5 243 68.7
C07p00210 Brassica napus HOM05D001108 ORTHO05D005418 6.6e-82 308.1 201 78.6
AT2G20690 Arabidopsis thaliana HOM05D001108 ORTHO05D005418 1.5e-81 307.0 213 72.8
A07p00070 Brassica napus HOM05D001108 ORTHO05D005418 1.5e-81 307.0 248 68.1
arahy.Tifrunner.gnm1.ann1.S0UG05 Arachis hypogaea HOM05D001108 ORTHO05D005418 2.5e-81 306.2 274 63.9
Dinv26419 Davidia involucrata HOM05D001108 ORTHO05D005418 2.5e-81 306.2 177 84.7
SEGI_26411 Sequoiadendron giganteum HOM05D001108 ORTHO05D005418 2.5e-81 306.2 202 77.2
BcaC06g36761 Brassica carinata HOM05D001108 ORTHO05D005418 3.3e-81 305.8 201 78.1
BolC7t40471H Brassica oleracea HOM05D001108 ORTHO05D005418 3.3e-81 305.8 201 78.1
Carub.0003s3520 Capsella rubella HOM05D001108 ORTHO05D005418 4.3e-81 305.4 213 73.7
ECA246G0340 Erigeron canadensis HOM05D001108 ORTHO05D005418 4.3e-81 305.4 192 78.1
Medtr1g066930 Medicago truncatula HOM05D001108 ORTHO05D005418 4.3e-81 305.4 268 61.2
SGA_v2.0_scaffold92G28314 Striga asiatica HOM05D001108 ORTHO05D005418 7.3e-81 304.7 279 61.6
BraA07t27798Z Brassica rapa HOM05D001108 ORTHO05D005418 9.6e-81 304.3 248 67.7
Dinv23643 Davidia involucrata HOM05D001108 ORTHO05D005418 9.6e-81 304.3 177 85.9
Aqoxy1G02436 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 1.4e-79 300.4 174 87.4
AL3G53780 Arabidopsis lyrata HOM05D001108 ORTHO05D005418 1.8e-79 300.1 201 76.1
AUR62007757 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.8e-79 300.1 218 71.6
Lj1P722T15 Lonicera japonica HOM05D001108 ORTHO05D005418 4.4e-78 295.4 175 86.9
CDE02G0464 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 4.9e-77 292.0 190 75.8
Pp3c2_19260 Physcomitrium patens HOM05D001108 ORTHO05D005418 4.9e-77 292.0 221 68.3
Sp3g33940 Schrenkiella parvula HOM05D001108 ORTHO05D005418 6.4e-77 291.6 190 78.4
MELO3C000760.2 Cucumis melo HOM05D001108 ORTHO05D005418 1.1e-76 290.8 242 64.0
AagrBONN_evm.TU.Sc2ySwM_228.5414 Anthoceros agrestis HOM05D001108 ORTHO05D005418 7.1e-76 288.1 202 71.8
Mapoly0026s0114 Marchantia polymorpha HOM05D001108 ORTHO05D005418 2.7e-75 286.2 198 71.2
Duzib128G0360 Durio zibethinus HOM05D001108 ORTHO05D005418 7.8e-75 284.6 242 64.0
SMO137G0361 Selaginella moellendorffii HOM05D001108 ORTHO05D005418 1.7e-74 283.5 198 71.7
CBR_g36747 Chara braunii HOM05D001108 ORTHO05D005418 2.3e-74 283.1 200 71.0
Ah.04g164360 Amaranthus hybridus HOM05D001108 ORTHO05D005418 1.1e-71 274.2 238 60.9
Actinidia11036 Actinidia chinensis HOM05D001108 ORTHO05D005418 1.4e-71 273.9 184 77.2
ATR1096G056 Amborella trichopoda HOM05D001108 ORTHO05D005418 9.0e-71 271.2 207 66.7
CDE09G0563 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 9.9e-70 267.7 179 73.2
Zm00001eb410210 Zea mays HOM05D001108 ORTHO05D005418 7.9e-67 258.1 238 56.7
Zm00001eb410410 Zea mays HOM05D001108 ORTHO05D005418 2.3e-66 256.5 237 57.8
CAN.G248.16 Capsicum annuum HOM05D001108 ORTHO05D005418 3.3e-65 252.7 165 73.9
CAN.G851.1 Capsicum annuum HOM05D001108 ORTHO05D005418 3.3e-65 252.7 165 73.9
HanXRQChr06g0169711 Helianthus annuus HOM05D001108 ORTHO05D005418 3.3e-65 252.7 274 55.5
Sabra19G0110900 Salix brachista HOM05D001108 ORTHO05D005418 1.5e-62 243.8 252 56.7
Os12g0541000 Oryza sativa ssp. japonica HOM05D001108 ORTHO05D005418 5.8e-62 241.9 234 53.4
BcaC04g22783 Brassica carinata HOM05D001108 ORTHO05D005418 4.2e-60 235.7 219 61.2
MD09G1265300 Malus domestica HOM05D001108 ORTHO05D005418 2.8e-56 223.0 175 66.3
Psat4g001880 Pisum sativum HOM05D001108 ORTHO05D005418 6.5e-53 211.8 262 49.6
CANSAT80G2295 Cannabis sativa HOM05D001108 ORTHO05D005418 1.0e-50 204.5 131 74.8
C09p15330 Brassica napus HOM05D001108 ORTHO05D005418 5.1e-50 202.2 190 60.5
unitig_88.g27586 Utricularia gibba HOM05D001108 ORTHO05D005418 1.2e-43 181.0 103 86.4
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 3.6e-43 179.5 198 47.0
Cfa026241 Carpinus fangiana HOM05D001108 ORTHO05D005418 2.0e-41 173.7 178 51.1
Lsat_1_v5_gn_4_42240 Lactuca sativa HOM05D001108 ORTHO05D005418 7.4e-41 171.8 104 81.7
HanXRQChr06g0169731 Helianthus annuus HOM05D001108 ORTHO05D005418 1.1e-36 157.9 85 89.4
CAN.G362.18 Capsicum annuum HOM05D001108 ORTHO05D005418 3.6e-35 152.9 209 47.4
Cfa014613 Carpinus fangiana HOM05D001108 ORTHO05D005418 2.0e-33 147.1 211 46.0
FAN08G2132 Fragaria x ananassa HOM05D001108 ORTHO05D005418 2.0e-33 147.1 88 79.5
PRCOL_00001102 Prasinoderma coloniale HOM05D001108 ORTHO05D005418 1.1e-25 121.3 174 40.8
unitig_88.g27587 Utricularia gibba HOM05D001108 ORTHO05D005418 1.1e-25 121.3 151 51.0
Cre06.g296600 Chlamydomonas reinhardtii HOM05D001108 ORTHO05D005418 1.5e-25 120.9 210 35.2
Psat5g098840 Pisum sativum HOM05D001108 ORTHO05D005418 9.7e-25 118.2 137 48.2
MCO11G757 Micromonas commoda HOM05D001108 ORTHO05D005418 2.2e-24 117.1 214 37.9
CAN.G248.14 Capsicum annuum HOM05D001108 ORTHO05D005418 2.4e-23 113.6 70 77.1
Ca_28725_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 2.9e-21 106.7 209 34.4
AagrBONN_evm.TU.Sc2ySwM_228.459 Anthoceros agrestis HOM05D001108 ORTHO05D005418 4.2e-20 102.8 202 34.7
Psat5g097760 Pisum sativum HOM05D002292 ORTHO05D005418 3.6e-19 99.8 149 39.6
Lsat_1_v5_gn_8_150060 Lactuca sativa HOM05D001108 ORTHO05D005418 2.0e-14 84.0 65 61.5
Medtr4g063470 Medicago truncatula HOM05D001108 ORTHO05D005418 3.5e-14 83.2 66 60.6
RcHm_v2.0_Chr2g0153941 Rosa chinensis HOM05D001108 ORTHO05D005418 7.2e-12 75.5 113 45.1
BolC9t54441H Brassica oleracea HOM05D001108 ORTHO05D005418 1.7e-08 64.3 36 86.1
MBI06_g06479_MAGBIO Magnolia biondii HOM05D001108 ORTHO05D005418 4.5e-06 56.2 59 59.3


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