Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 3.8e-73 278.5 189 100.0
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 5.6e-72 274.6 189 98.9
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 2.1e-42 176.4 189 59.3
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 2.4e-38 162.9 197 71.1
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 1.1e-35 154.1 197 68.5
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 4.2e-35 152.1 196 67.9
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 4.2e-35 152.1 193 54.9
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 2.1e-34 149.8 197 55.8
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 1.0e-33 147.5 189 57.7
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 1.1e-32 144.1 195 56.9
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.9e-32 143.3 206 48.1
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 1.9e-32 143.3 199 52.3
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 2.1e-31 139.8 187 48.7
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 2.8e-31 139.4 190 63.2
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 3.1e-30 136.0 198 65.2
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 3.1e-30 136.0 198 65.2
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 6.9e-30 134.8 198 64.6
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 1.2e-29 134.0 190 54.7
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.2e-29 134.0 198 64.6
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 5.8e-29 131.7 195 65.1
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 1.7e-28 130.2 195 54.4
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 2.9e-28 129.4 204 46.1
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 4.9e-28 128.6 202 46.5
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 4.9e-28 128.6 205 52.7
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.1e-27 127.5 191 53.4
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 1.4e-27 127.1 190 45.8
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 9.3e-27 124.4 196 57.1
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.6e-26 123.6 202 45.0
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 2.1e-26 123.2 202 45.0
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 4.6e-26 122.1 192 45.3
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 4.6e-26 122.1 201 51.7
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.8e-25 120.2 190 47.9
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 2.3e-25 119.8 190 44.7
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 5.1e-25 118.6 198 50.0
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 6.7e-25 118.2 190 55.8
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.9e-24 116.7 191 41.9
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 3.3e-24 115.9 205 43.9
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 5.6e-24 115.2 194 48.5
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 3.7e-23 112.5 200 42.5
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 1.8e-22 110.2 196 59.2
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 5.3e-22 108.6 158 70.9
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 9.0e-22 107.8 188 56.4
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 7.6e-21 104.8 195 45.6
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 2.2e-20 103.2 208 43.8
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 2.9e-20 102.8 125 68.0
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 3.8e-20 102.4 196 44.4
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 6.4e-20 101.7 203 36.0
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 1.4e-19 100.5 195 45.6
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 1.9e-19 100.1 192 40.6
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 1.9e-19 100.1 194 40.7
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 3.2e-19 99.4 191 44.0
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 5.5e-19 98.6 210 46.7
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 5.5e-19 98.6 209 46.4
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 5.5e-19 98.6 186 39.8
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.7e-18 96.3 193 36.8
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 2.7e-18 96.3 188 45.7
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 6.0e-18 95.1 210 43.3
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 1.0e-17 94.4 202 40.6
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 1.0e-17 94.4 191 48.7
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.3e-17 93.2 189 38.1
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 6.7e-17 91.7 194 37.6
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 8.7e-17 91.3 190 44.2
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 8.7e-17 91.3 194 55.7
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 1.1e-16 90.9 157 45.9
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 1.5e-16 90.5 65 63.1
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 1.9e-16 90.1 193 53.4
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 4.3e-16 89.0 205 39.0
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 4.3e-16 89.0 205 39.0
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 4.3e-16 89.0 176 39.2
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 2.1e-15 86.7 200 41.0
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 2.8e-15 86.3 208 42.8
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 2.8e-15 86.3 196 52.6
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 3.7e-15 85.9 192 37.0
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 6.2e-15 85.1 206 41.3
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 6.2e-15 85.1 194 43.8
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 8.2e-15 84.7 183 38.3
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.1e-14 84.3 190 43.2
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 1.8e-14 83.6 156 50.6
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 3.1e-14 82.8 191 36.6
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 2.0e-13 80.1 66 59.1
Eucgr.H03966 Eucalyptus grandis HOM05D007152 ORTHO05D008912 4.5e-13 79.0 201 41.8
Sp3g05760 Schrenkiella parvula HOM05D007152 ORTHO05D008912 7.6e-13 78.2 208 40.9
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 1.7e-12 77.0 60 60.0
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 2.2e-12 76.6 137 51.1
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 4.9e-12 75.5 56 67.9
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 4.9e-12 75.5 206 35.0
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 6.5e-12 75.1 56 62.5
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 1.1e-11 74.3 57 64.9
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 2.5e-11 73.2 193 46.1
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 3.2e-11 72.8 63 61.9
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 4.2e-11 72.4 200 34.5
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 4.2e-11 72.4 185 32.4
Eucgr.G02132 Eucalyptus grandis HOM05D007152 ORTHO05D008912 9.3e-11 71.2 64 59.4
Eucgr.G02139 Eucalyptus grandis HOM05D007152 ORTHO05D008912 1.2e-10 70.9 69 56.5
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 2.1e-10 70.1 59 59.3
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 3.5e-10 69.3 50 64.0
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 4.6e-10 68.9 54 59.3
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 4.6e-10 68.9 66 54.5
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 7.9e-10 68.2 204 36.8
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 7.9e-10 68.2 204 36.8
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 1.0e-09 67.8 200 33.5
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 3.0e-09 66.2 183 34.4
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 6.7e-09 65.1 49 63.3
Dinv28193 Davidia involucrata HOM05D007152 ORTHO05D008912 6.3e-07 58.5 30 80.0


User provided reference genes

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