Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.2e-154 548.9 273 100.0
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.3e-150 534.6 282 95.7
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 3.5e-67 259.2 244 61.5
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 5.0e-66 255.4 227 63.4
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.3e-65 252.3 139 92.8
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 7.5e-62 241.5 142 88.7
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 2.7e-59 233.0 225 61.3
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 3.0e-58 229.6 228 59.2
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 3.9e-58 229.2 229 57.6
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 1.4e-55 220.7 232 60.8
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 2.3e-55 219.9 206 63.1
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 4.0e-55 219.2 202 59.9
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 2.0e-54 216.9 200 60.5
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 3.4e-54 216.1 220 58.6
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 3.4e-54 216.1 203 57.6
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 4.4e-54 215.7 239 55.2
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 7.5e-54 214.9 220 55.9
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 7.5e-54 214.9 233 54.1
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 2.2e-53 213.4 209 58.9
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.9e-53 213.0 236 53.4
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 2.9e-53 213.0 215 56.3
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.7e-53 212.6 233 53.6
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 8.3e-53 211.5 229 53.7
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 8.3e-53 211.5 228 53.9
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 1.4e-52 210.7 203 58.1
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 1.9e-52 210.3 230 54.3
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 4.1e-52 209.1 238 51.3
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 5.4e-52 208.8 211 57.3
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 5.4e-52 208.8 239 54.0
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 5.4e-52 208.8 234 53.4
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 5.4e-52 208.8 227 55.5
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 9.2e-52 208.0 207 57.5
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 9.2e-52 208.0 227 54.6
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 2.7e-51 206.5 204 58.3
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 2.7e-51 206.5 206 56.8
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 4.6e-51 205.7 213 57.7
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 4.6e-51 205.7 229 53.3
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 4.6e-51 205.7 208 59.1
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.0e-50 204.5 230 54.8
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 1.0e-50 204.5 216 55.6
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 1.3e-50 204.1 220 54.5
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.3e-50 204.1 207 55.6
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.3e-50 204.1 204 57.4
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.3e-50 203.4 196 58.7
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 2.3e-50 203.4 209 58.4
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 5.1e-50 202.2 190 59.5
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 5.1e-50 202.2 204 56.9
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 6.6e-50 201.8 200 56.5
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 8.6e-50 201.4 201 57.7
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 8.6e-50 201.4 221 51.1
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 8.6e-50 201.4 192 58.9
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.5e-49 200.7 200 57.0
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 1.9e-49 200.3 186 61.3
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.9e-49 200.3 233 51.9
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.9e-49 200.3 200 57.5
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 2.5e-49 199.9 214 53.7
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.5e-49 199.9 239 51.5
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 7.3e-49 198.4 200 55.5
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.1e-48 196.8 203 56.7
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 3.6e-48 196.1 192 59.4
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 8.1e-48 194.9 186 59.1
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 8.1e-48 194.9 245 52.7
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.1e-47 194.5 196 58.7
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.4e-47 194.1 219 53.9
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 1.8e-47 193.7 198 57.1
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 2.4e-47 193.4 199 55.8
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 2.4e-47 193.4 226 52.7
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 3.1e-47 193.0 194 56.2
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 3.1e-47 193.0 195 56.4
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.2e-46 191.0 225 50.7
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 2.0e-46 190.3 228 48.7
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 1.3e-45 187.6 225 52.4
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 2.2e-45 186.8 219 51.1
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 3.8e-45 186.0 203 52.7
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 3.8e-45 186.0 204 53.4
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 4.9e-45 185.7 211 53.6
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 6.4e-45 185.3 219 51.1
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 6.4e-45 185.3 202 53.5
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 1.1e-44 184.5 197 53.3
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 1.4e-44 184.1 201 55.7
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.9e-44 183.7 199 53.8
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 7.1e-44 181.8 219 50.2
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.2e-43 181.0 188 57.4
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 2.1e-43 180.3 221 48.4
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 3.5e-43 179.5 142 69.7
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 6.0e-43 178.7 128 72.7
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.3e-42 177.6 108 79.6
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.7e-42 177.2 235 52.3
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 9.6e-41 171.4 186 56.5
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 1.3e-40 171.0 229 48.9
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 2.1e-40 170.2 108 81.5
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.1e-39 167.9 186 55.4
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 1.4e-39 167.5 105 79.0
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.5e-38 164.1 112 76.8
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 1.3e-37 161.0 138 61.6
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 1.7e-37 160.6 201 48.3
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 2.9e-37 159.8 105 75.2
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 5.3e-31 139.0 102 65.7
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 3.8e-29 132.9 193 46.1
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 1.4e-28 131.0 114 63.2
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 2.7e-27 126.7 147 54.4
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 6.2e-24 115.5 205 42.4
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 3.1e-23 113.2 134 55.2
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 6.5e-21 105.5 73 68.5
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 2.5e-20 103.6 193 38.9
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 3.5e-19 99.8 177 40.7
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 2.3e-18 97.1 128 52.3
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 2.5e-17 93.6 139 43.2
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 9.6e-17 91.7 170 37.6
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 2.4e-15 87.0 76 59.2
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 4.1e-15 86.3 58 70.7
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 9.0e-15 85.1 101 44.6
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.6e-14 83.6 57 75.4
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 6.1e-11 72.4 41 78.0
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.9e-09 67.4 48 64.6
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 3.3e-09 66.6 73 50.7
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.1e-07 61.6 80 43.8
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 9.0e-07 58.5 84 40.5
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 5.9e-06 55.8 38 63.2
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 5.9e-06 55.8 38 68.4


User provided reference genes

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