Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 4.3e-127 458.0 227 100.0
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 4.8e-94 348.2 227 77.5
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 1.9e-87 326.2 227 72.7
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 1.7e-75 286.6 226 67.3
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 1.3e-70 270.4 227 62.6
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 4.1e-69 265.4 225 63.6
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.5e-68 263.5 236 62.7
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 3.2e-66 255.8 224 59.8
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 3.2e-66 255.8 231 59.3
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 7.1e-66 254.6 233 60.5
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 9.3e-66 254.2 224 58.0
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 7.9e-65 251.1 226 60.2
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 3.0e-64 249.2 225 56.4
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 1.1e-63 247.3 229 58.1
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 1.9e-63 246.5 225 56.9
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.1e-61 240.7 227 56.4
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 2.4e-61 239.6 258 54.3
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 2.6e-60 236.1 226 55.8
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 3.4e-60 235.7 226 55.8
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.3e-59 233.8 232 54.7
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 1.7e-59 233.4 230 57.8
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.9e-58 229.9 235 53.6
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 1.9e-58 229.9 252 52.0
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 2.7e-57 226.1 235 53.2
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 6.1e-57 224.9 214 54.7
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 1.4e-56 223.8 228 56.1
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 3.9e-56 222.2 253 52.2
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 1.1e-55 220.7 216 55.6
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 1.5e-55 220.3 229 51.5
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 4.3e-55 218.8 227 53.3
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.7e-54 216.9 210 57.1
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 1.7e-54 216.9 232 51.7
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 1.1e-53 214.2 226 50.0
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 3.1e-53 212.6 229 53.3
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 3.1e-53 212.6 229 53.3
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 9.1e-53 211.1 250 46.0
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 3.8e-51 205.7 267 44.9
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 7.2e-50 201.4 226 52.2
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 4.7e-49 198.7 227 50.2
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 2.0e-47 193.4 234 49.1
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 4.4e-47 192.2 263 43.0
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 2.4e-45 186.4 213 53.1
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 2.2e-43 179.9 250 44.0
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 4.7e-41 172.2 228 49.1
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.8e-40 170.2 153 62.1
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 2.3e-40 169.9 227 45.8
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 3.3e-39 166.0 239 42.7
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 4.5e-36 155.6 171 55.0
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 7.2e-34 148.3 190 47.4
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 1.4e-32 144.1 150 56.7
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 4.1e-29 132.5 205 42.0
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 5.4e-29 132.1 254 35.0
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 4.5e-28 129.0 175 48.0
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 2.2e-27 126.7 173 44.5
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 2.9e-27 126.3 220 40.5
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 1.6e-25 120.6 170 46.5
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 1.6e-25 120.6 170 46.5
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 2.7e-25 119.8 170 47.1
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 1.0e-24 117.9 165 45.5
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 6.3e-22 108.6 76 64.5
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.1e-18 97.8 121 45.5
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 1.5e-18 97.4 122 48.4
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 8.0e-09 65.1 41 68.3
QL05p004958 Quercus lobata HOM05D008254 ORTHO05D010423 1.7e-06 57.4 85 42.4


User provided reference genes

Program Settings