Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 7.2e-264 913.3 442 100.0
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.8e-243 845.5 442 94.3
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 9.2e-219 763.5 441 83.4
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 5.8e-213 744.2 441 81.9
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.3e-209 733.0 440 82.5
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 2.3e-185 652.5 440 71.6
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 6.2e-183 644.4 448 71.9
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 1.2e-181 640.2 441 73.7
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.5e-181 639.8 442 69.7
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 2.0e-181 639.4 442 70.8
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.3e-180 636.7 442 70.4
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 2.9e-180 635.6 443 71.1
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.2e-179 632.1 442 70.1
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.5e-179 631.3 442 69.9
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.2e-178 630.2 442 69.7
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 2.1e-178 629.4 447 71.1
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 3.5e-178 628.6 445 69.9
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 3.0e-177 625.5 442 67.9
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 5.7e-176 621.3 448 68.3
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 1.6e-175 619.8 442 68.6
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 3.7e-175 618.6 453 67.5
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 1.0e-172 610.5 442 66.3
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 5.0e-172 608.2 442 66.3
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 8.5e-172 607.4 449 67.9
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 9.4e-171 604.0 443 68.8
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.2e-170 603.6 444 69.1
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 1.6e-170 603.2 445 68.5
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 5.7e-168 594.7 440 68.4
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 5.7e-168 594.7 443 68.2
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 1.3e-167 593.6 444 70.0
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.3e-167 593.6 443 67.5
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 8.2e-167 590.9 444 68.2
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.4e-166 590.1 440 68.4
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.0e-164 583.9 467 65.5
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 1.0e-164 583.9 441 68.3
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 5.0e-164 581.6 458 66.2
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 5.0e-164 581.6 443 65.5
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 2.7e-162 575.9 453 66.0
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 3.6e-162 575.5 445 66.7
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 6.1e-162 574.7 451 65.6
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.8e-161 573.2 445 66.3
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.8e-161 573.2 446 66.1
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 5.1e-161 571.6 444 64.9
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 8.2e-159 564.3 459 64.1
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 1.8e-158 563.1 442 64.3
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 7.0e-158 561.2 404 69.1
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 2.0e-157 559.7 456 63.6
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 4.5e-157 558.5 456 63.6
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.3e-156 557.0 443 65.5
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.3e-156 557.0 440 65.0
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 1.3e-156 557.0 441 66.4
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 3.8e-156 555.4 463 62.4
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 6.5e-156 554.7 445 64.5
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.9e-155 553.1 443 65.0
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 1.2e-154 550.4 448 60.7
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 2.7e-154 549.3 451 63.9
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 6.1e-154 548.1 441 62.8
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.8e-153 546.6 448 64.3
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 3.9e-153 545.4 451 62.1
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 6.7e-153 544.7 461 61.4
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.6e-152 542.7 452 63.7
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 5.7e-152 541.6 442 63.3
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 2.8e-151 539.3 453 61.6
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 3.7e-151 538.9 450 61.8
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 8.2e-151 537.7 443 63.2
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.2e-149 533.9 452 60.4
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.0e-149 533.1 440 64.1
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 2.6e-149 532.7 424 64.4
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 2.6e-149 532.7 445 62.0
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 3.8e-148 528.9 513 55.4
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 7.2e-147 524.6 444 61.7
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 4.7e-146 521.9 442 62.7
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 1.0e-145 520.8 447 61.7
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 9.7e-144 514.2 305 78.7
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.8e-143 512.7 302 79.8
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 8.3e-143 511.1 443 60.7
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 8.3e-143 511.1 439 59.2
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 1.4e-142 510.4 482 58.1
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 9.1e-142 507.7 470 58.5
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.0e-141 506.5 444 60.1
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 3.5e-141 505.8 519 52.0
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 1.7e-140 503.4 326 71.8
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 3.8e-140 502.3 441 60.3
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.5e-139 500.4 386 67.4
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 9.4e-139 497.7 420 58.1
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 8.8e-137 491.1 456 57.7
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 6.3e-135 485.0 455 58.2
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.8e-134 483.4 301 71.8
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 5.5e-131 471.9 370 66.5
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 1.4e-121 440.7 293 71.0
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 7.0e-118 428.3 339 64.0
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.6e-117 427.2 461 52.9
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 4.0e-113 412.5 345 59.4
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 4.0e-113 412.5 345 59.4
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.6e-112 409.8 232 82.3
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 8.3e-111 404.8 366 60.7
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 1.9e-110 403.7 349 63.6
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 9.2e-110 401.4 452 48.0
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 1.7e-108 397.1 266 69.9
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.5e-107 394.0 407 53.6
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 9.5e-107 391.3 312 61.9
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 4.7e-106 389.0 301 62.5
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 8.1e-106 388.3 218 81.7
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 1.7e-100 370.5 307 59.0
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 8.1e-98 361.7 365 55.1
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 2.2e-87 327.0 201 77.6
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 2.9e-87 326.6 202 77.2
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 6.2e-74 282.3 208 63.5
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 6.2e-74 282.3 208 63.5
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 3.8e-71 273.1 267 49.4
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 4.1e-65 253.1 278 41.7
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 5.1e-60 236.1 118 87.3
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 1.4e-57 228.0 256 50.8
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 5.3e-49 199.5 215 47.9
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 2.9e-39 167.2 134 59.0
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 7.5e-35 152.5 126 57.9
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 9.1e-33 145.6 126 55.6
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 6.5e-31 139.4 80 75.0
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.5e-30 138.3 70 88.6
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 1.3e-23 115.2 68 75.0
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 2.5e-22 110.9 76 64.5
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 2.0e-16 91.3 53 75.5
CiPaw.12G058200 Carya illinoinensis HOM05D006116 ORTHO05D007795 4.0e-12 77.0 131 43.5
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 4.0e-12 77.0 62 54.8
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 7.5e-11 72.8 120 31.7
Atru.chr9.1146 Acer truncatum HOM05D006116 ORTHO05D007795 2.2e-10 71.2 110 45.5
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.7e-08 64.3 59 45.8
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 1.7e-07 61.6 39 66.7


User provided reference genes

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