Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.3e-100 369.8 187 100.0
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.3e-100 369.8 187 100.0
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 4.1e-75 285.0 186 74.7
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 4.5e-74 281.6 188 76.6
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 1.0e-73 280.4 187 72.7
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 1.4e-72 276.6 175 75.4
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 2.5e-72 275.8 176 75.6
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 4.2e-72 275.0 174 74.7
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 7.2e-72 274.2 187 71.7
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.6e-71 273.1 187 70.6
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 6.1e-71 271.2 169 76.3
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 7.9e-71 270.8 188 72.9
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.4e-70 270.0 181 71.3
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 2.3e-70 269.2 167 77.8
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 2.3e-70 269.2 187 70.1
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 2.3e-70 269.2 187 70.6
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 2.3e-70 269.2 187 70.6
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 3.0e-70 268.9 170 75.9
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 5.1e-70 268.1 190 70.0
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 8.8e-70 267.3 187 72.2
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.5e-69 266.5 167 76.6
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 2.0e-69 266.2 188 71.3
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 2.6e-69 265.8 187 70.1
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 3.3e-69 265.4 187 69.5
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 3.3e-69 265.4 169 75.1
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 7.4e-69 264.2 189 69.8
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 1.3e-68 263.5 170 74.7
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 2.2e-68 262.7 189 68.3
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 2.8e-68 262.3 187 68.4
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 2.8e-68 262.3 170 74.7
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 2.8e-68 262.3 171 71.3
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 2.8e-68 262.3 187 72.7
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 4.8e-68 261.5 187 69.0
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 4.8e-68 261.5 177 70.6
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 8.2e-68 260.8 167 74.9
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 1.4e-67 260.0 211 62.1
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.8e-67 259.6 174 75.3
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 2.4e-67 259.2 169 73.4
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 2.4e-67 259.2 189 67.2
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 4.1e-67 258.5 194 65.5
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 5.3e-67 258.1 194 63.9
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 7.0e-67 257.7 169 71.0
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 7.0e-67 257.7 187 67.9
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 9.1e-67 257.3 189 68.3
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 1.5e-66 256.5 207 63.3
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 3.5e-66 255.4 189 65.1
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 3.5e-66 255.4 189 65.1
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 5.9e-66 254.6 189 66.7
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 1.7e-65 253.1 189 66.1
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 2.2e-65 252.7 180 67.2
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.2e-65 252.7 194 63.4
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 2.9e-65 252.3 193 66.8
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.9e-65 252.3 178 66.9
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 2.9e-65 252.3 194 62.9
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 5.0e-65 251.5 170 68.8
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 5.0e-65 251.5 158 75.3
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.9e-64 249.6 188 67.6
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 3.2e-64 248.8 170 69.4
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 5.5e-64 248.1 178 71.9
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 9.4e-64 247.3 166 72.9
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 3.6e-63 245.4 191 62.3
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 4.7e-63 245.0 174 71.3
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.0e-62 243.8 162 72.2
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 6.7e-62 241.1 168 64.9
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 2.0e-61 239.6 169 68.0
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 4.4e-61 238.4 185 64.3
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 5.7e-61 238.0 158 72.2
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 1.7e-60 236.5 266 50.0
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 6.3e-60 234.6 191 61.3
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 9.1e-59 230.7 158 69.0
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 9.1e-59 230.7 156 71.2
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 2.0e-58 229.6 158 68.4
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 5.9e-58 228.0 162 69.1
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 5.9e-58 228.0 190 60.5
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.0e-57 227.3 168 64.3
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 8.5e-57 224.2 138 78.3
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.9e-56 223.0 176 63.1
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 3.6e-55 218.8 118 87.3
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.8e-54 216.5 153 66.0
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 4.0e-54 215.3 179 62.0
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 9.1e-51 204.1 137 73.0
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 2.0e-50 203.0 138 72.5
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 4.5e-50 201.8 161 59.0
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 1.0e-49 200.7 166 61.4
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 1.9e-48 196.4 170 52.9
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.6e-47 193.4 168 57.1
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 4.7e-47 191.8 204 52.5
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 4.0e-46 188.7 158 58.9
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 5.2e-46 188.3 156 57.1
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 1.7e-44 183.3 177 58.8
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 3.7e-44 182.2 119 70.6
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 6.3e-44 181.4 158 55.1
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 1.2e-42 177.2 134 63.4
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 1.2e-42 177.2 132 65.2
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 9.5e-40 167.5 132 58.3
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 4.7e-39 165.2 107 72.0
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 6.1e-39 164.9 120 66.7
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 3.0e-38 162.5 99 82.8
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 2.6e-37 159.5 97 79.4
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 3.4e-37 159.1 116 63.8
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 4.4e-37 158.7 109 69.7
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 4.4e-37 158.7 107 70.1
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 1.3e-36 157.1 97 79.4
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 2.9e-36 156.0 118 65.3
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 4.9e-36 155.2 165 43.6
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 9.2e-35 151.0 162 48.1
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 1.5e-32 143.7 88 76.1
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 6.8e-30 134.8 97 63.9
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 2.0e-29 133.3 75 90.7
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 7.8e-26 121.3 131 53.4
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 6.6e-25 118.2 98 61.2
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 6.2e-23 111.7 138 43.5
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.5e-21 107.1 82 62.2
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 6.4e-20 101.7 94 54.3
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 9.2e-19 97.8 155 32.9
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 5.6e-16 88.6 49 89.8
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 3.2e-11 72.8 49 69.4
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 6.2e-07 58.5 36 77.8


User provided reference genes

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