Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.8e-81 305.8 152 100.0
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.2e-63 245.7 147 86.4
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 6.7e-52 207.6 147 71.4
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.7e-50 203.0 147 70.7
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 1.1e-49 200.3 147 70.1
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 1.1e-49 200.3 148 69.6
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 4.5e-48 194.9 146 69.2
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 8.5e-47 190.7 147 64.6
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.4e-46 189.9 147 67.3
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 1.9e-46 189.5 147 63.9
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 7.2e-46 187.6 145 65.5
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 3.0e-44 182.2 148 64.2
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 3.9e-44 181.8 146 63.0
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 3.9e-44 181.8 146 62.3
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 3.9e-44 181.8 145 65.5
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 5.2e-44 181.4 145 64.8
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 6.7e-44 181.0 145 64.8
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 6.7e-44 181.0 144 68.8
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 8.8e-44 180.6 148 60.8
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 2.0e-43 179.5 146 63.0
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 3.3e-43 178.7 147 61.9
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 3.3e-43 178.7 149 62.4
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.4e-43 177.6 148 61.5
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 9.7e-43 177.2 146 63.0
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 1.3e-42 176.8 147 63.3
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.3e-42 176.8 147 60.5
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.7e-42 175.3 148 60.1
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 4.8e-42 174.9 146 57.5
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 4.8e-42 174.9 146 61.0
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 6.3e-42 174.5 147 63.3
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 2.4e-41 172.6 147 55.8
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 2.4e-41 172.6 148 60.1
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 2.4e-41 172.6 149 59.7
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 2.4e-41 172.6 148 57.4
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 3.1e-41 172.2 147 59.2
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 3.1e-41 172.2 147 61.2
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 3.1e-41 172.2 147 61.2
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 4.1e-41 171.8 147 59.2
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 7.0e-41 171.0 144 63.2
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 9.1e-41 170.6 145 62.1
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.2e-40 170.2 136 62.5
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.5e-40 168.7 145 60.7
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 4.5e-40 168.3 148 58.1
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 7.7e-40 167.5 133 62.4
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 1.0e-39 167.2 145 60.7
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.0e-39 167.2 148 56.1
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 1.0e-39 167.2 148 58.8
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 2.9e-39 165.6 143 60.1
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 2.9e-39 165.6 147 55.1
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.8e-39 165.2 147 55.1
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 3.8e-39 165.2 144 58.3
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 8.5e-39 164.1 145 58.6
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.5e-38 163.3 140 59.3
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.5e-38 163.3 147 54.4
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.5e-38 162.5 142 59.2
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 3.2e-38 162.2 150 56.7
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 3.2e-38 162.2 153 55.6
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 3.2e-38 162.2 145 58.6
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 4.2e-38 161.8 152 55.3
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 4.2e-38 161.8 149 55.7
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 4.2e-38 161.8 148 55.4
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 4.2e-38 161.8 145 57.9
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 7.2e-38 161.0 137 57.7
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 7.2e-38 161.0 149 57.7
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.2e-37 160.2 148 58.1
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.2e-37 160.2 147 53.7
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.6e-37 159.8 147 53.1
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.1e-37 159.5 147 55.8
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 2.1e-37 159.5 146 55.5
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 2.1e-37 159.5 148 54.7
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 2.7e-37 159.1 148 55.4
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 2.7e-37 159.1 145 57.2
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 3.6e-37 158.7 150 54.7
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 3.6e-37 158.7 148 55.4
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 6.1e-37 157.9 147 54.4
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 1.4e-36 156.8 144 52.8
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.4e-36 156.8 147 55.1
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.4e-36 156.8 147 55.1
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.4e-36 156.8 147 55.1
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 1.4e-36 156.8 147 55.1
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.4e-36 156.8 147 55.1
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 1.8e-36 156.4 147 55.1
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 2.3e-36 156.0 148 51.4
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 6.7e-36 154.5 148 52.7
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 6.7e-36 154.5 148 54.1
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 8.8e-36 154.1 148 54.1
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 9.7e-35 150.6 144 52.8
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 9.7e-35 150.6 144 52.8
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 2.8e-34 149.1 149 51.7
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 3.7e-34 148.7 145 50.3
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.8e-33 146.4 145 55.2
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 8.5e-31 137.5 147 51.0
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 2.5e-30 136.0 146 48.6
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.2e-29 133.7 116 59.5
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.8e-20 103.2 76 64.5
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 3.0e-20 102.4 105 49.5
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.7e-18 96.7 148 35.1
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 3.7e-18 95.5 99 48.5
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.9e-18 95.1 144 35.4
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 2.4e-17 92.8 91 52.7
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.8e-15 85.5 54 70.4
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 5.6e-14 81.6 68 60.3
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 1.5e-11 73.6 147 33.3
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 3.2e-09 65.9 143 32.9
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 9.2e-09 64.3 130 31.5


User provided reference genes

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