Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043948 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D007223 9.1e-310 1066.6 789 100.0
Actinidia17384 Actinidia chinensis HOM05D001343 ORTHO05D007223 4.6e-237 825.1 789 70.8
Dinv08526 Davidia involucrata HOM05D001343 ORTHO05D007223 4.3e-219 765.4 789 62.7
Duzib147G0638 Durio zibethinus HOM05D001343 ORTHO05D007223 2.3e-196 689.9 787 67.1
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla HOM05D001343 ORTHO05D007223 4.8e-194 682.2 794 58.8
vmacro20524 Vaccinium macrocarpon HOM05D001343 ORTHO05D007223 5.9e-192 675.2 752 66.8
Duzib187G0329 Durio zibethinus HOM05D001343 ORTHO05D007223 2.1e-189 666.8 790 61.6
Haze_03675 Corylus avellana HOM05D001343 ORTHO05D007223 6.7e-188 661.8 805 60.5
GSVIVG01003839001 Vitis vinifera HOM05D001343 ORTHO05D007223 4.4e-187 659.1 738 64.9
Actinidia22910 Actinidia chinensis HOM05D001343 ORTHO05D007223 5.7e-187 658.7 793 63.7
QL06p052741 Quercus lobata HOM05D001343 ORTHO05D007223 5.7e-187 658.7 822 59.2
TAR381G1734 Trochodendron aralioides HOM05D001343 ORTHO05D007223 5.0e-183 645.6 789 60.6
Dinv40173 Davidia involucrata HOM05D001343 ORTHO05D007223 1.1e-182 644.4 597 73.0
CiPaw.07G004100 Carya illinoinensis HOM05D001343 ORTHO05D007223 3.7e-178 629.4 788 58.8
Lalb_Chr05g0211921 Lupinus albus HOM05D001343 ORTHO05D007223 8.3e-178 628.2 791 59.9
Prupe.7G179600 Prunus persica HOM05D001343 ORTHO05D007223 1.7e-175 620.5 789 61.0
Sed0023593 Sechium edule HOM05D001343 ORTHO05D007223 2.3e-172 610.1 787 60.1
Gohir.A10G099100 Gossypium hirsutum HOM05D001343 ORTHO05D007223 2.0e-171 607.1 788 61.7
Thecc.01G007100 Theobroma cacao HOM05D001343 ORTHO05D007223 5.7e-171 605.5 787 62.1
CsaV3_3G000380 Cucumis sativus L. HOM05D001343 ORTHO05D007223 1.7e-170 604.0 788 61.7
QL06p053829 Quercus lobata HOM05D001343 ORTHO05D007223 1.7e-170 604.0 788 61.5
PSO210G1702 Papaver somniferum HOM05D001343 ORTHO05D007223 4.9e-170 602.4 774 59.3
Atru.chr3.956 Acer truncatum HOM05D001343 ORTHO05D007223 3.1e-169 599.7 772 56.6
TWI09G1271 Tripterygium wilfordii HOM05D001343 ORTHO05D007223 3.1e-169 599.7 791 59.0
Aqoxy5G01035 Aquilegia oxysepala HOM05D001343 ORTHO05D007223 1.6e-168 597.4 789 54.8
ClCG10G000340 Citrullus lanatus HOM05D001343 ORTHO05D007223 1.9e-166 590.5 796 61.1
TPR.G25095 Trifolium pratense HOM05D001343 ORTHO05D007223 2.9e-162 576.6 796 59.3
CANSAT25G0854 Cannabis sativa HOM05D001343 ORTHO05D007223 3.7e-162 576.2 744 59.0
MD15G1233300 Malus domestica HOM05D001343 ORTHO05D007223 1.9e-161 573.9 788 52.5
CANSAT25G1453 Cannabis sativa HOM05D001343 ORTHO05D007223 3.2e-161 573.2 744 58.6
Sabra05G0082500 Salix brachista HOM05D001343 ORTHO05D007223 7.0e-161 572.0 791 56.3
ECA238G2213 Erigeron canadensis HOM05D001343 ORTHO05D007223 6.0e-160 568.9 799 56.6
Gohir.D10G089000 Gossypium hirsutum HOM05D001343 ORTHO05D007223 6.6e-159 565.5 788 59.4
Gorai.011G097900 Gossypium raimondii HOM05D001343 ORTHO05D007223 1.9e-158 563.9 788 59.3
Cpa.g.sc55.186 Carica papaya HOM05D001343 ORTHO05D007223 1.2e-157 561.2 784 57.3
Potri.005G099800 Populus trichocarpa HOM05D001343 ORTHO05D007223 3.6e-157 559.7 791 55.0
HanXRQChr14g0442391 Helianthus annuus HOM05D001343 ORTHO05D007223 6.2e-157 558.9 791 57.4
PSO170G3735 Papaver somniferum HOM05D001343 ORTHO05D007223 1.8e-156 557.4 763 58.1
COL.COLO4_22537 Corchorus olitorius HOM05D001343 ORTHO05D007223 5.2e-156 555.8 788 56.1
Nitab4.5_0000702g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 5.2e-156 555.8 788 53.3
Peaxi162Scf01446g00025 Petunia axillaris HOM05D001343 ORTHO05D007223 9.8e-155 551.6 803 51.8
SGA_v2.0_scaffold12G05990 Striga asiatica HOM05D001343 ORTHO05D007223 1.1e-153 548.1 789 50.7
Phvul.002G114800 Phaseolus vulgaris HOM05D001343 ORTHO05D007223 3.5e-152 543.1 793 48.5
Thhalv10003686m.g Eutrema salsugineum HOM05D001343 ORTHO05D007223 1.0e-151 541.6 773 59.9
EL10Ac6g15468 Beta vulgaris HOM05D001343 ORTHO05D007223 1.5e-150 537.7 802 54.2
Hund03615 Selenicereus undatus HOM05D001343 ORTHO05D007223 2.5e-150 537.0 789 54.1
MELO3C013733.2 Cucumis melo HOM05D001343 ORTHO05D007223 9.5e-150 535.0 775 59.9
AT5G66030 Arabidopsis thaliana HOM05D001343 ORTHO05D007223 1.6e-149 534.3 800 57.2
Manes.02G112700 Manihot esculenta HOM05D001343 ORTHO05D007223 2.8e-149 533.5 788 58.4
Glyma.01G159900 Glycine max HOM05D001343 ORTHO05D007223 2.3e-148 530.4 794 53.1
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 5.2e-148 529.3 755 57.6
FvH4_1g10521 Fragaria vesca HOM05D001343 ORTHO05D007223 1.5e-147 527.7 783 55.8
FAN23G1852 Fragaria x ananassa HOM05D001343 ORTHO05D007223 4.4e-147 526.2 783 53.9
Nitab4.5_0002967g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 1.7e-146 524.2 787 53.2
FAN19G1061 Fragaria x ananassa HOM05D001343 ORTHO05D007223 1.9e-145 520.8 783 54.9
Ciclev10024922m.g Citrus clementina HOM05D001343 ORTHO05D007223 3.5e-144 516.5 797 51.8
MSTRG.15594 Avicennia marina HOM05D001343 ORTHO05D007223 2.3e-143 513.8 789 52.7
FAN28G2189 Fragaria x ananassa HOM05D001343 ORTHO05D007223 8.6e-143 511.9 783 54.9
MD02G1119300 Malus domestica HOM05D001343 ORTHO05D007223 2.1e-141 507.3 788 49.1
THA.LOC104826465 Tarenaya hassleriana HOM05D001343 ORTHO05D007223 8.1e-141 505.4 784 52.9
Lj2g0004784 Lotus japonicus HOM05D001343 ORTHO05D007223 6.8e-140 502.3 798 53.6
PGR083G0487 Punica granatum HOM05D001343 ORTHO05D007223 1.2e-139 501.5 763 53.9
AL8G45590 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 8.4e-138 495.4 781 56.3
Medtr5g023770 Medicago truncatula HOM05D001343 ORTHO05D007223 1.9e-137 494.2 770 55.8
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea HOM05D001343 ORTHO05D007223 2.4e-137 493.8 795 54.1
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea HOM05D001343 ORTHO05D007223 2.4e-137 493.8 795 54.1
Cc07_g11650 Coffea canephora HOM05D001343 ORTHO05D007223 4.2e-137 493.0 788 60.3
Carub.0008s2848 Capsella rubella HOM05D001343 ORTHO05D007223 1.3e-135 488.0 772 52.3
Glyma.11G084200 Glycine max HOM05D001343 ORTHO05D007223 1.1e-134 485.0 793 53.6
Sopen02g027640 Solanum pennellii HOM05D001343 ORTHO05D007223 1.1e-134 485.0 787 53.5
Sc16g0001690 Simmondsia chinensis HOM05D001343 ORTHO05D007223 1.9e-134 484.2 787 53.9
Nn5g30956 Nelumbo nucifera HOM05D001343 ORTHO05D007223 2.1e-133 480.7 753 51.0
A09p10220 Brassica napus HOM05D001343 ORTHO05D002008 1.1e-132 478.4 730 56.2
ATR0661G538 Amborella trichopoda HOM05D001343 ORTHO05D007223 1.4e-132 478.0 776 52.6
Solyc02g082840.3 Solanum lycopersicum HOM05D001343 ORTHO05D007223 1.4e-132 478.0 787 52.6
Atru.chr3.968 Acer truncatum HOM05D001343 ORTHO05D007223 1.8e-132 477.6 776 50.5
CAN.G890.76 Capsicum annuum HOM05D001343 ORTHO05D007223 1.8e-132 477.6 787 46.5
SalBow5G5069 Salvia bowleyana HOM05D001343 ORTHO05D007223 1.8e-132 477.6 846 49.3
BraA09t36667Z Brassica rapa HOM05D001343 ORTHO05D002008 2.4e-132 477.2 749 55.3
Migut.L00734 Erythranthe guttata HOM05D001343 ORTHO05D007223 9.0e-132 475.3 793 54.9
BolC9t54101H Brassica oleracea HOM05D001343 ORTHO05D002008 5.8e-131 472.6 752 54.8
Sp2g30660 Schrenkiella parvula HOM05D001343 ORTHO05D007223 5.8e-131 472.6 758 57.0
BcaC04g23105 Brassica carinata HOM05D001343 ORTHO05D002008 7.1e-129 465.7 745 54.4
C09p12110 Brassica napus HOM05D001343 ORTHO05D002008 7.1e-129 465.7 745 54.4
AUR62003379 Chenopodium quinoa HOM05D001343 ORTHO05D007223 3.9e-127 459.9 790 52.2
AUR62029449 Chenopodium quinoa HOM05D001343 ORTHO05D007223 1.6e-125 454.5 790 51.8
VMungo1215G1031 Vigna mungo HOM05D001343 ORTHO05D007223 2.8e-125 453.8 793 51.6
Lsat_1_v5_gn_2_74420 Lactuca sativa HOM05D001343 ORTHO05D007223 5.3e-124 449.5 792 50.0
Ah.03g148390 Amaranthus hybridus HOM05D001343 ORTHO05D007223 7.1e-121 439.1 789 49.2
Eucgr.J02528 Eucalyptus grandis HOM05D001343 ORTHO05D007223 3.5e-120 436.8 794 52.4
Lj4A232G45 Lonicera japonica HOM05D001343 ORTHO05D007223 1.3e-117 428.3 761 53.5
Ca_24963_v3 Cicer arietinum L. HOM05D001343 ORTHO05D007223 4.0e-116 423.3 819 48.7
Manes.01G153700 Manihot esculenta HOM05D001343 ORTHO05D007223 1.3e-114 418.3 502 56.2
Os07g0472500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D007223 2.5e-113 414.1 746 50.9
Zm00001eb104860 Zea mays HOM05D001343 ORTHO05D007223 6.7e-103 379.4 749 41.8
HPP92_003502 Vanilla planifolia HOM05D001343 ORTHO05D007223 1.8e-100 371.3 774 45.5
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 6.1e-96 356.3 772 38.5
CARHR281730 Cardamine hirsuta HOM05D001343 ORTHO05D007223 4.1e-92 343.6 420 51.2
AagrBONN_evm.TU.Sc2ySwM_344.163 Anthoceros agrestis HOM05D001343 ORTHO05D007223 1.1e-89 335.5 519 46.6
SEGI_12448 Sequoiadendron giganteum HOM05D001343 ORTHO05D007223 5.7e-86 323.2 774 43.9
DCAR_011583 Daucus carota HOM05D001343 ORTHO05D007223 4.5e-83 313.5 783 43.0
Mapoly0179s0009 Marchantia polymorpha HOM05D001343 ORTHO05D007223 1.0e-79 302.4 754 33.6
RcHm_v2.0_Chr2g0097451 Rosa chinensis HOM05D001343 ORTHO05D007223 1.5e-65 255.4 190 76.3
RcHm_v2.0_Chr2g0097461 Rosa chinensis HOM05D001343 ORTHO05D007223 2.1e-64 251.5 568 51.2
CDE06G1375 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 6.1e-64 250.0 274 54.4
RcHm_v2.0_Chr2g0097581 Rosa chinensis HOM05D001343 ORTHO05D007223 5.7e-62 243.4 576 50.3
Pp3c20_18210 Physcomitrium patens HOM05D001343 ORTHO05D007223 7.0e-60 236.5 519 35.5
Psat2g150520 Pisum sativum HOM05D001343 ORTHO05D007223 3.5e-59 234.2 397 62.5
Actinidia26548 Actinidia chinensis HOM05D001343 ORTHO05D007223 7.7e-59 233.0 184 71.2
CDE07G1064 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 1.3e-58 232.3 253 54.5
Pp3c23_9770 Physcomitrium patens HOM05D001343 ORTHO05D007223 3.6e-56 224.2 521 37.6
Migut.L00927 Erythranthe guttata HOM05D001343 ORTHO05D007223 5.4e-52 210.3 374 68.7
Rhsim10G0198000 Rhododendron simsii HOM05D001343 ORTHO05D007223 2.8e-48 198.0 812 31.8
Migut.L00811 Erythranthe guttata HOM05D001343 ORTHO05D007223 1.4e-47 195.7 132 81.8
Psat2g150480 Pisum sativum HOM05D001343 ORTHO05D007223 1.4e-47 195.7 193 59.6
CDE07G1287 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 6.0e-43 180.3 219 54.8
QL06p053793 Quercus lobata HOM05D001343 ORTHO05D007223 5.0e-42 177.2 137 75.9
CBR_g34809 Chara braunii HOM05D000019 ORTHO05D000002 6.2e-40 170.2 370 39.7
RcHm_v2.0_Chr2g0097571 Rosa chinensis HOM05D001343 ORTHO05D007223 1.6e-35 155.6 123 71.5
Actinidia26547 Actinidia chinensis HOM05D001343 ORTHO05D007223 8.3e-29 133.3 144 55.6
Oeu032010.1 Olea europaea HOM05D001343 ORTHO05D007223 4.1e-28 131.0 140 54.3
arahy.Tifrunner.gnm1.ann1.9PSP05 Arachis hypogaea HOM05D001343 ORTHO05D007223 5.6e-25 120.6 156 53.2
Cpa.g.sc1414.4 Carica papaya HOM05D001343 ORTHO05D007223 4.7e-24 117.5 122 57.4
arahy.Tifrunner.gnm1.ann1.6P6C0I Arachis hypogaea HOM05D001343 ORTHO05D007223 2.9e-21 108.2 95 78.9
arahy.Tifrunner.gnm1.ann1.ISY8LN Arachis hypogaea HOM05D001343 ORTHO05D007223 3.5e-19 101.3 178 39.3
RcHm_v2.0_Chr6g0253501 Rosa chinensis HOM05D001343 ORTHO05D007223 8.7e-18 96.7 144 47.9
Aa31LG1G14520 Aethionema arabicum HOM05D001343 ORTHO05D007223 2.1e-16 92.0 156 42.9
arahy.Tifrunner.gnm1.ann1.T78FCF Arachis hypogaea HOM05D001343 ORTHO05D007223 1.7e-13 82.4 79 62.0
CDE06G1191 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 2.4e-12 78.6 97 47.4
AL472U10010 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 3.2e-12 78.2 128 40.6
HPP92_003508 Vanilla planifolia HOM05D001343 ORTHO05D007223 9.3e-12 76.6 56 75.0
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 6.0e-11 73.9 45 77.8
RcHm_v2.0_Chr2g0097561 Rosa chinensis HOM05D001343 ORTHO05D007223 5.1e-10 70.9 47 80.9
ECA238G3708 Erigeron canadensis HOM05D012425 ORTHO05D014354 2.4e-07 62.0 66 56.1


User provided reference genes

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