Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043929 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 1.4e-178 629.4 302 100.0
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 1.5e-140 503.1 328 77.4
CSS0033232 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 3.3e-135 485.3 293 84.6
Rhsim04G0208100 Rhododendron simsii HOM05D013111 ORTHO05D013046 2.8e-49 199.9 254 45.7
vmacro10470 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 4.2e-45 186.0 339 36.3
vmacro20887 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 2.3e-43 180.3 251 41.8
Rhsim11G0059800 Rhododendron simsii HOM05D013111 ORTHO05D013046 6.6e-35 152.1 256 39.1
Rhsim04G0224100 Rhododendron simsii HOM05D013111 ORTHO05D013046 2.7e-28 130.2 171 45.0
Rhsim11G0040000 Rhododendron simsii HOM05D013111 ORTHO05D013046 2.4e-24 117.1 339 29.5
vmacro22846 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 3.1e-24 116.7 178 40.4
Rhsim05G0135400 Rhododendron simsii HOM05D013111 ORTHO05D013046 9.3e-21 105.1 206 33.0
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.3e-19 101.3 220 31.4
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.3e-18 96.3 214 32.2
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.8e-17 92.8 225 30.7
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 7.6e-15 85.5 103 43.7
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 1.9e-13 80.9 224 29.5
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 3.2e-13 80.1 91 45.1
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.2e-13 79.0 91 44.0
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 7.2e-13 79.0 123 34.1
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.2e-12 78.2 91 44.0
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.7e-12 77.0 102 41.2
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 7.9e-12 75.5 114 38.6
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 1.3e-11 74.7 243 30.0
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 1.8e-11 74.3 176 33.0
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.1e-11 72.8 99 38.4
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.7e-11 72.4 99 39.4
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 1.1e-10 71.6 133 36.1
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.9e-10 70.9 150 28.7
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.9e-10 70.9 143 32.2
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 4.3e-10 69.7 92 38.0
Aqoxy7G03986 Aquilegia oxysepala HOM05D029118 ORTHO05D026731 9.7e-10 68.6 110 36.4
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.2e-09 67.4 112 33.9
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 2.8e-09 67.0 171 25.7
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-08 64.7 101 38.6
CSS0027586 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 4.5e-07 59.7 103 37.9
CSS0032255 Camellia sinensis var. sinensis HOM05D010628 ORTHO05D010877 4.5e-07 59.7 103 37.9
Aqoxy2G00744 Aquilegia oxysepala HOM05D002402 ORTHO05D002633 5.9e-07 59.3 130 33.1
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 5.9e-07 59.3 174 28.7
COL.COLO4_31293 Corchorus olitorius HOM05D001422 ORTHO05D001321 7.7e-07 58.9 106 36.8
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 1.0e-06 58.5 126 29.4
C03p82270 Brassica napus HOM05D000249 ORTHO05D000206 1.0e-06 58.5 117 33.3
BolC3t20525H Brassica oleracea HOM05D000249 ORTHO05D000206 1.0e-06 58.5 117 33.3
CARHR225340 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.0e-06 58.5 181 27.1
Thhalv10026886m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.0e-06 58.5 92 35.9
AL7G16100 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.7e-06 57.8 93 36.6
A08p14570 Brassica napus HOM05D000249 ORTHO05D000206 2.2e-06 57.4 117 33.3
BraA08t33443Z Brassica rapa HOM05D000249 ORTHO05D000206 2.2e-06 57.4 117 33.3
CSS0041179 Camellia sinensis var. sinensis HOM05D052153 ORTHO05D013046 2.9e-06 57.0 70 38.6
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 2.9e-06 57.0 98 37.8
Thhalv10025415m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 3.8e-06 56.6 113 31.9
CSS0005929 Camellia sinensis var. sinensis HOM05D052153 ORTHO05D013046 5.0e-06 56.2 73 35.6
BcaC09g51419 Brassica carinata HOM05D000249 ORTHO05D000206 6.5e-06 55.8 96 35.4
BolC1t01306H Brassica oleracea HOM05D000249 ORTHO05D000206 6.5e-06 55.8 96 35.4
BolC3t20083H Brassica oleracea HOM05D000249 ORTHO05D000206 6.5e-06 55.8 95 33.7
CARHR041160 Cardamine hirsuta HOM05D000249 ORTHO05D000206 6.5e-06 55.8 95 37.9
CARHR041170 Cardamine hirsuta HOM05D000249 ORTHO05D000206 6.5e-06 55.8 108 34.3
BcaNung00897 Brassica carinata HOM05D000249 ORTHO05D000206 8.5e-06 55.5 65 41.5
A01p03420 Brassica napus HOM05D000249 ORTHO05D000206 8.5e-06 55.5 142 29.6
A01p11270 Brassica napus HOM05D000249 ORTHO05D000206 8.5e-06 55.5 96 36.5
A01p11300 Brassica napus HOM05D000249 ORTHO05D000206 8.5e-06 55.5 96 36.5
BraA01t01072Z Brassica rapa HOM05D000249 ORTHO05D000206 8.5e-06 55.5 96 36.5
BraA01t01074Z Brassica rapa HOM05D000249 ORTHO05D000206 8.5e-06 55.5 96 36.5


User provided reference genes

Program Settings