Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043914 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 2.6e-241 838.6 517 100.0
CiPaw.04G143100 Carya illinoinensis HOM05D000158 ORTHO05D000197 5.6e-34 149.8 146 52.7
Lj2g0001766 Lotus japonicus HOM05D000158 ORTHO05D000197 5.6e-34 149.8 148 51.4
QL07p020245 Quercus lobata HOM05D000158 ORTHO05D000002 1.6e-33 148.3 147 51.7
Lj5g0004307 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-30 138.7 146 47.9
Manes.17G011850 Manihot esculenta HOM05D000158 ORTHO05D000197 2.2e-30 137.9 146 44.5
Lj3g0012861 Lotus japonicus HOM05D000158 ORTHO05D000197 1.4e-29 135.2 142 46.5
Oeu006234.1 Olea europaea HOM05D000158 ORTHO05D000197 1.4e-29 135.2 149 45.0
Lj6g0019227 Lotus japonicus HOM05D000158 ORTHO05D000197 2.5e-29 134.4 146 44.5
CiPaw.01G104600 Carya illinoinensis HOM05D000158 ORTHO05D000197 5.5e-29 133.3 148 48.6
Lj1g0004303 Lotus japonicus HOM05D000158 ORTHO05D000197 5.5e-29 133.3 145 46.9
Manes.09G074619 Manihot esculenta HOM05D000158 ORTHO05D000197 9.3e-29 132.5 146 41.8
Lj2g0025380 Lotus japonicus HOM05D000158 ORTHO05D000197 1.2e-28 132.1 145 46.2
Lj3g0008836 Lotus japonicus HOM05D000158 ORTHO05D000197 1.2e-28 132.1 145 47.6
Oeu007102.1 Olea europaea HOM05D000158 ORTHO05D010634 1.2e-28 132.1 149 45.0
Lj6g0006038 Lotus japonicus HOM05D000158 ORTHO05D000197 1.6e-28 131.7 145 44.8
Oeu015679.1 Olea europaea HOM05D000158 ORTHO05D000197 2.1e-28 131.3 149 44.3
Lj3g0009331 Lotus japonicus HOM05D000158 ORTHO05D000197 3.5e-28 130.6 151 45.7
Lj3g0014470 Lotus japonicus HOM05D000158 ORTHO05D000197 3.5e-28 130.6 151 45.7
Manes.17G011766 Manihot esculenta HOM05D000158 ORTHO05D000197 6.0e-28 129.8 146 43.2
TPR.G1870 Trifolium pratense HOM05D000158 ORTHO05D000197 6.0e-28 129.8 148 42.6
Lj1g0013324 Lotus japonicus HOM05D000158 ORTHO05D000197 7.9e-28 129.4 151 45.0
Lj1g0019916 Lotus japonicus HOM05D000158 ORTHO05D000197 7.9e-28 129.4 145 46.2
Lj3g0017745 Lotus japonicus HOM05D000158 ORTHO05D000197 7.9e-28 129.4 151 45.0
Lj5g0004453 Lotus japonicus HOM05D000158 ORTHO05D000197 7.9e-28 129.4 151 45.0
Oeu005697.1 Olea europaea HOM05D000158 ORTHO05D002858 7.9e-28 129.4 149 44.3
Oeu060640.1 Olea europaea HOM05D000158 ORTHO05D000197 1.8e-27 128.3 193 37.8
Lj1g0020144 Lotus japonicus HOM05D000158 ORTHO05D000197 2.3e-27 127.9 141 45.4
TPR.G31232 Trifolium pratense HOM05D000158 ORTHO05D002858 2.3e-27 127.9 147 44.2
CAN.G15806.1 Capsicum annuum HOM05D000158 ORTHO05D000197 3.0e-27 127.5 147 42.9
Lj5g0015403 Lotus japonicus HOM05D000158 ORTHO05D000197 3.0e-27 127.5 141 46.8
Oeu048057.1 Olea europaea HOM05D000158 ORTHO05D000197 6.7e-27 126.3 171 42.1
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 1.1e-26 125.6 139 44.6
Oeu057633.1 Olea europaea HOM05D000158 ORTHO05D000197 1.1e-26 125.6 193 37.8
Lj2g0019716 Lotus japonicus HOM05D000158 ORTHO05D000197 1.9e-26 124.8 139 47.5
TPR.G15160 Trifolium pratense HOM05D000158 ORTHO05D002858 2.5e-26 124.4 147 42.2
Lj4g0017546 Lotus japonicus HOM05D000158 ORTHO05D000197 4.3e-26 123.6 138 46.4
Oeu053054.1 Olea europaea HOM05D000158 ORTHO05D010634 5.7e-26 123.2 149 40.9
Lj2g0010792 Lotus japonicus HOM05D000158 ORTHO05D000197 7.4e-26 122.9 145 44.8
Lj4g0018844 Lotus japonicus HOM05D000158 ORTHO05D000197 7.4e-26 122.9 140 45.7
Glyma.05G072900 Glycine max HOM05D000158 ORTHO05D000197 9.7e-26 122.5 146 44.5
MELO3C004850.2 Cucumis melo HOM05D000158 ORTHO05D000197 2.2e-25 121.3 149 38.9
Lj4g0011178 Lotus japonicus HOM05D000158 ORTHO05D000197 3.7e-25 120.6 137 46.0
Lj1g0026464 Lotus japonicus HOM05D000158 ORTHO05D000197 8.2e-25 119.4 137 45.3
LjContig00080g0010393 Lotus japonicus HOM05D000158 ORTHO05D000197 8.2e-25 119.4 137 45.3
Atru.chr4.1438 Acer truncatum HOM05D000158 ORTHO05D000197 1.1e-24 119.0 146 42.5
HanXRQChr02g0042331 Helianthus annuus HOM05D000158 ORTHO05D000197 1.4e-24 118.6 144 43.1
HanXRQChr02g0042351 Helianthus annuus HOM05D000158 ORTHO05D000197 1.4e-24 118.6 144 43.1
Glyma.11G160800 Glycine max HOM05D000158 ORTHO05D000197 3.1e-24 117.5 162 42.0
Gorai.004G105400 Gossypium raimondii HOM05D000158 ORTHO05D000197 5.3e-24 116.7 164 41.5
ClCG03G013730 Citrullus lanatus HOM05D000158 ORTHO05D000002 9.0e-24 115.9 149 38.3
ClCG10G003450 Citrullus lanatus HOM05D000158 ORTHO05D000002 1.5e-23 115.2 149 38.3
Oeu032984.1 Olea europaea HOM05D000158 ORTHO05D000197 1.5e-23 115.2 192 37.5
CiPaw.08G029600 Carya illinoinensis HOM05D000158 ORTHO05D000197 4.5e-23 113.6 171 41.5
CsaV3_1G030770 Cucumis sativus L. HOM05D000158 ORTHO05D000197 5.9e-23 113.2 148 35.8
Lj3g0020463 Lotus japonicus HOM05D000158 ORTHO05D000197 7.7e-23 112.8 125 47.2
Manes.17G002683 Manihot esculenta HOM05D000158 ORTHO05D000197 1.7e-22 111.7 147 38.8
Lj1g0025016 Lotus japonicus HOM05D000158 ORTHO05D000197 2.2e-22 111.3 137 43.8
Migut.O00085 Erythranthe guttata HOM05D000158 ORTHO05D000197 5.0e-22 110.2 148 39.9
Lj2g0026449 Lotus japonicus HOM05D000158 ORTHO05D000197 6.5e-22 109.8 129 43.4
TPR.G13936 Trifolium pratense HOM05D000158 ORTHO05D000197 1.4e-21 108.6 144 42.4
MSTRG.22449 Avicennia marina HOM05D000004 ORTHO05D000048 4.2e-21 107.1 147 38.1
Lj4g0028212 Lotus japonicus HOM05D000158 ORTHO05D000197 3.6e-20 104.0 149 41.6
Lj6g0009515 Lotus japonicus HOM05D000158 ORTHO05D000197 1.0e-19 102.4 149 41.6
RcHm_v2.0_Chr2g0106171 Rosa chinensis HOM05D000158 ORTHO05D000002 1.4e-19 102.1 154 33.8
Oeu041041.1 Olea europaea HOM05D000158 ORTHO05D000197 2.3e-19 101.3 152 36.2
Lj5g0012305 Lotus japonicus HOM05D000158 ORTHO05D000197 8.8e-19 99.4 113 45.1
LjContig00506g0000245 Lotus japonicus HOM05D000158 ORTHO05D000197 8.8e-19 99.4 113 45.1
Manes.09G089621 Manihot esculenta HOM05D000158 ORTHO05D000002 4.3e-18 97.1 147 37.4
TPR.G20471 Trifolium pratense HOM05D000004 ORTHO05D000002 5.7e-18 96.7 121 42.1
Manes.01G032701 Manihot esculenta HOM05D000158 ORTHO05D000197 9.7e-18 95.9 148 34.5
Lj6g0015358 Lotus japonicus HOM05D000158 ORTHO05D000197 1.7e-17 95.1 85 50.6
Lj1g0013168 Lotus japonicus HOM05D000158 ORTHO05D000197 6.3e-17 93.2 87 50.6
PGSC0003DMG400022758 Solanum tuberosum HOM05D000158 ORTHO05D010408 6.3e-17 93.2 140 36.4
CiPaw.03G066400 Carya illinoinensis HOM05D000158 ORTHO05D000197 1.8e-16 91.7 119 43.7
Oeu028104.1 Olea europaea HOM05D000158 ORTHO05D000197 3.1e-16 90.9 147 38.8
Oeu008647.1 Olea europaea HOM05D000158 ORTHO05D000197 4.1e-16 90.5 125 37.6
TPR.G892 Trifolium pratense HOM05D000158 ORTHO05D000197 2.2e-14 84.7 109 37.6
TPR.G32580 Trifolium pratense HOM05D000158 ORTHO05D003614 2.9e-14 84.3 78 51.3
Lj4g0019709 Lotus japonicus HOM05D000158 ORTHO05D000197 8.5e-14 82.8 110 40.9
arahy.Tifrunner.gnm1.ann1.J536F0 Arachis hypogaea HOM05D000158 ORTHO05D000197 1.4e-13 82.0 147 32.7
TPR.G1896 Trifolium pratense HOM05D001145 ORTHO05D008176 3.2e-13 80.9 99 38.4
Oeu028306.1 Olea europaea HOM05D000158 ORTHO05D000197 4.2e-13 80.5 74 50.0
Thhalv10029457m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 5.5e-13 80.1 140 32.1
Lj2g0018729 Lotus japonicus HOM05D000158 ORTHO05D000197 1.2e-12 79.0 110 40.0
TPR.G811 Trifolium pratense HOM05D000158 ORTHO05D002858 1.2e-12 79.0 95 40.0
Manes.07G056008 Manihot esculenta HOM05D000158 ORTHO05D000197 1.6e-12 78.6 148 31.8
TPR.G24549 Trifolium pratense HOM05D000158 ORTHO05D002858 1.6e-12 78.6 99 38.4
TPR.G11637 Trifolium pratense HOM05D000158 ORTHO05D000197 2.1e-12 78.2 95 40.0
PGSC0003DMG400036915 Solanum tuberosum HOM05D000158 ORTHO05D000197 2.7e-12 77.8 140 35.0
TPR.G11094 Trifolium pratense HOM05D000158 ORTHO05D000197 3.0e-11 74.3 87 42.5
TPR.G7146 Trifolium pratense HOM05D000004 ORTHO05D000002 8.8e-11 72.8 70 50.0
TPR.G22537 Trifolium pratense HOM05D000158 ORTHO05D000197 1.1e-10 72.4 50 62.0
TPR.G26068 Trifolium pratense HOM05D000158 ORTHO05D000197 1.5e-10 72.0 95 38.9
Lj1g0002293 Lotus japonicus HOM05D000158 ORTHO05D000197 9.7e-10 69.3 102 39.2
Lj1g0015392 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-09 68.9 102 37.3
TPR.G12729 Trifolium pratense HOM05D000158 ORTHO05D000197 2.2e-09 68.2 80 45.0
Oeu010811.1 Olea europaea HOM05D000158 ORTHO05D000197 2.8e-09 67.8 58 50.0
PGSC0003DMG400040289 Solanum tuberosum HOM05D010819 ORTHO05D010408 4.8e-09 67.0 45 64.4
PGSC0003DMG400045112 Solanum tuberosum HOM05D000158 ORTHO05D000197 4.8e-09 67.0 45 62.2
PGSC0003DMG400036524 Solanum tuberosum HOM05D000158 ORTHO05D010408 1.1e-08 65.9 45 64.4
arahy.Tifrunner.gnm1.ann1.0Z9I1Z Arachis hypogaea HOM05D000158 ORTHO05D002858 1.4e-08 65.5 88 40.9
arahy.Tifrunner.gnm1.ann1.9VJJ5C Arachis hypogaea HOM05D000158 ORTHO05D000197 3.1e-08 64.3 85 40.0
arahy.Tifrunner.gnm1.ann1.T0AVIE Arachis hypogaea HOM05D000158 ORTHO05D000197 3.1e-08 64.3 85 40.0
arahy.Tifrunner.gnm1.ann1.UC4KU4 Arachis hypogaea HOM05D000158 ORTHO05D000197 3.1e-08 64.3 85 40.0
Migut.O00086 Erythranthe guttata HOM05D000158 ORTHO05D000197 4.1e-08 63.9 67 40.3
Manes.17G045701 Manihot esculenta HOM05D000158 ORTHO05D000197 7.0e-08 63.2 49 55.1
Sopen05g017700 Solanum pennellii HOM05D000014 ORTHO05D000093 1.2e-07 62.4 40 67.5
TPR.G17636 Trifolium pratense HOM05D000158 ORTHO05D000197 1.2e-07 62.4 102 35.3
Thhalv10028167m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 4.5e-07 60.5 74 43.2
Thhalv10023038m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 5.9e-07 60.1 41 63.4
Sopen06g013940 Solanum pennellii HOM05D000003 ORTHO05D000004 5.9e-07 60.1 54 53.7
Lj1g0019745 Lotus japonicus HOM05D000158 ORTHO05D002858 7.7e-07 59.7 79 43.0
Oeu061871.1 Olea europaea HOM05D003112 ORTHO05D003660 1.3e-06 58.9 87 36.8
Migut.O00084 Erythranthe guttata HOM05D000158 ORTHO05D000197 2.9e-06 57.8 104 31.7
arahy.Tifrunner.gnm1.ann1.IU1C5J Arachis hypogaea HOM05D000158 ORTHO05D000197 3.8e-06 57.4 81 39.5
TPR.G315 Trifolium pratense HOM05D000158 ORTHO05D002858 3.8e-06 57.4 103 37.9
Sopen09g009720 Solanum pennellii HOM05D010819 ORTHO05D010408 5.0e-06 57.0 49 51.0
TPR.G22354 Trifolium pratense HOM05D000158 ORTHO05D002858 5.0e-06 57.0 99 32.3
TPR.G22593 Trifolium pratense HOM05D000158 ORTHO05D000002 6.5e-06 56.6 40 62.5
arahy.Tifrunner.gnm1.ann1.2VQ6L0 Arachis hypogaea HOM05D000158 ORTHO05D002858 8.5e-06 56.2 113 32.7
TPR.G35940 Trifolium pratense HOM05D000158 ORTHO05D000197 8.5e-06 56.2 119 31.9


User provided reference genes

Program Settings