Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.1e-107 393.3 188 100.0
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 4.5e-82 308.1 185 83.2
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.1e-79 299.3 198 77.8
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 5.2e-78 294.7 199 76.4
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 1.8e-75 286.2 187 76.5
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 7.0e-75 284.3 187 75.9
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 2.0e-74 282.7 179 79.3
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 2.7e-74 282.3 180 77.2
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 7.7e-74 280.8 199 73.9
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 1.0e-73 280.4 195 73.3
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 1.3e-73 280.0 180 76.7
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 2.2e-73 279.3 187 74.9
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 2.9e-73 278.9 187 72.2
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 3.8e-73 278.5 186 74.7
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 5.0e-73 278.1 187 71.7
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 6.5e-73 277.7 186 73.1
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 6.5e-73 277.7 186 73.1
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 6.5e-73 277.7 186 73.1
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 6.5e-73 277.7 179 79.9
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 8.5e-73 277.3 186 73.1
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.1e-72 276.9 179 76.5
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.1e-72 276.9 179 76.5
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 1.5e-72 276.6 180 77.2
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 2.5e-72 275.8 187 74.9
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 3.2e-72 275.4 189 73.5
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 3.2e-72 275.4 159 81.1
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 3.2e-72 275.4 188 72.9
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.2e-72 275.4 186 72.6
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 4.2e-72 275.0 189 72.5
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 5.5e-72 274.6 180 76.7
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 7.2e-72 274.2 179 75.4
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 7.2e-72 274.2 180 75.6
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.2e-71 273.5 189 72.5
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 1.2e-71 273.5 189 72.5
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 1.2e-71 273.5 189 72.5
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 1.6e-71 273.1 180 75.6
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.1e-71 272.7 157 82.2
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 2.1e-71 272.7 180 75.0
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 2.1e-71 272.7 178 74.7
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 3.6e-71 271.9 189 72.0
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 4.7e-71 271.6 178 75.3
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 4.7e-71 271.6 180 75.6
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 4.7e-71 271.6 187 72.7
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 6.1e-71 271.2 180 75.6
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.4e-70 270.0 180 74.4
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 2.3e-70 269.2 158 82.9
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 5.2e-70 268.1 180 72.2
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 5.2e-70 268.1 180 73.3
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 5.2e-70 268.1 180 72.8
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 6.8e-70 267.7 178 74.7
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 6.8e-70 267.7 181 74.0
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 8.8e-70 267.3 178 74.7
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 8.8e-70 267.3 182 74.2
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.5e-69 266.5 158 81.6
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 2.0e-69 266.2 178 74.7
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 2.6e-69 265.8 156 82.7
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 3.4e-69 265.4 180 73.9
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 5.7e-69 264.6 180 73.9
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.3e-68 263.5 189 70.4
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 1.3e-68 263.5 180 73.3
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 1.7e-68 263.1 183 71.0
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 8.3e-68 260.8 180 73.3
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 1.1e-67 260.4 180 72.2
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 1.8e-67 259.6 180 72.8
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 2.4e-67 259.2 180 73.3
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 2.4e-67 259.2 180 72.8
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 2.4e-67 259.2 180 72.8
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 2.4e-67 259.2 180 73.3
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 9.1e-67 257.3 180 72.8
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 9.1e-67 257.3 180 70.6
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.2e-66 256.9 180 72.2
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 1.6e-66 256.5 178 73.6
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 1.6e-66 256.5 178 73.6
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 1.6e-66 256.5 156 79.5
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 2.0e-66 256.1 183 71.6
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 2.0e-66 256.1 183 71.6
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 2.0e-66 256.1 183 71.6
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 2.0e-66 256.1 183 71.6
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 3.5e-66 255.4 180 72.2
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 4.5e-66 255.0 180 71.1
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 5.0e-65 251.5 181 69.6
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 6.5e-65 251.1 190 67.9
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 6.5e-65 251.1 180 72.8
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 6.5e-65 251.1 180 71.1
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 8.6e-65 250.8 180 71.7
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 4.2e-64 248.4 178 73.6
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 7.2e-64 247.7 183 69.9
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 6.1e-63 244.6 222 58.6
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 2.3e-62 242.7 180 69.4
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 4.0e-62 241.9 175 70.9
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 4.0e-62 241.9 187 67.4
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 6.8e-62 241.1 187 65.2
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 2.6e-61 239.2 192 64.6
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 2.6e-61 239.2 139 82.0
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 3.4e-61 238.8 180 67.2
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 1.8e-59 233.0 178 65.7
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 1.6e-58 229.9 177 66.7
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 2.0e-58 229.6 144 77.1
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 2.8e-55 219.2 160 69.4
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 2.3e-49 199.5 139 69.8
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 3.3e-48 195.7 161 62.7
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.1e-43 180.6 100 85.0
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 1.1e-43 180.6 162 56.8
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 2.4e-43 179.5 157 56.7
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 3.5e-42 175.6 100 83.0
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 1.9e-40 169.9 106 77.4
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.2e-39 167.2 185 48.6
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 5.2e-30 135.2 166 48.2
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 9.9e-29 131.0 155 46.5
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 5.4e-27 125.2 98 65.3
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 7.1e-27 124.8 141 46.1
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 3.5e-26 122.5 86 72.1
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 7.8e-26 121.3 127 52.8
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 1.3e-25 120.6 143 40.6
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 3.2e-19 99.4 96 47.9
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 9.3e-19 97.8 53 88.7
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.3e-17 94.0 78 62.8
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 4.3e-16 89.0 59 71.2
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 3.9e-09 65.9 37 81.1


User provided reference genes

Program Settings