Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043815 Camellia sinensis var. sinensis HOM05D010025 ORTHO05D013126 3.6e-53 211.5 118 100.0
Actinidia22529 Actinidia chinensis HOM05D010025 ORTHO05D013126 1.2e-16 90.1 70 67.1
Rhsim06G0031600 Rhododendron simsii HOM05D010025 ORTHO05D013126 7.4e-14 80.9 73 61.6
Rhsim06G0030900 Rhododendron simsii HOM05D010025 ORTHO05D013126 1.6e-13 79.7 58 69.0
Dinv36101 Davidia involucrata HOM05D010025 ORTHO05D010580 3.4e-11 72.0 67 62.7
Dinv39435 Davidia involucrata HOM05D010025 ORTHO05D010580 7.6e-11 70.9 64 60.9
Cc10_g02650 Coffea canephora HOM05D010025 ORTHO05D013126 2.2e-10 69.3 72 54.2
MD15G1024800 Malus domestica HOM05D008807 ORTHO05D010580 2.4e-09 65.9 76 51.3
Prupe.1G377200 Prunus persica HOM05D008807 ORTHO05D010580 2.7e-08 62.4 46 67.4
Nitab4.5_0008031g0070 Nicotiana tabacum HOM05D010025 ORTHO05D013126 3.5e-08 62.0 75 48.0
Peaxi162Scf00582g00015 Petunia axillaris HOM05D010025 ORTHO05D013126 6.0e-08 61.2 76 47.4
MD08G1029300 Malus domestica HOM05D008807 ORTHO05D010580 7.9e-08 60.8 76 47.4
Thecc.08G029700 Theobroma cacao HOM05D008807 ORTHO05D010580 7.9e-08 60.8 43 62.8
Nn5g29649 Nelumbo nucifera HOM05D008807 ORTHO05D010580 3.9e-07 58.5 65 49.2
Nitab4.5_0003265g0110 Nicotiana tabacum HOM05D010025 ORTHO05D013126 8.7e-07 57.4 103 37.9
Manes.18G022900 Manihot esculenta HOM05D008807 ORTHO05D010580 1.1e-06 57.0 75 48.0
Haze_17940 Corylus avellana HOM05D008807 ORTHO05D010580 1.5e-06 56.6 73 49.3
Lsat_1_v5_gn_4_117741 Lactuca sativa HOM05D010025 ORTHO05D013126 1.9e-06 56.2 59 55.9
Peaxi162Scf00303g00059 Petunia axillaris HOM05D010025 ORTHO05D013126 1.9e-06 56.2 67 49.3
HanXRQChr16g0501551 Helianthus annuus HOM05D010025 ORTHO05D013126 2.5e-06 55.8 59 54.2
Manes.05G157800 Manihot esculenta HOM05D008807 ORTHO05D010580 2.5e-06 55.8 71 46.5
SalBow7G4456 Salvia bowleyana HOM05D010025 ORTHO05D356616 3.3e-06 55.5 71 47.9
GSVIVG01009733001 Vitis vinifera HOM05D008807 ORTHO05D010580 3.3e-06 55.5 46 56.5
Cpa.g.sc123.50 Carica papaya HOM05D008807 ORTHO05D010580 4.3e-06 55.1 46 54.3
Potri.002G034300 Populus trichocarpa HOM05D008807 ORTHO05D010580 5.6e-06 54.7 57 49.1
PGSC0003DMG400003739 Solanum tuberosum HOM05D010025 ORTHO05D013126 5.6e-06 54.7 62 51.6
Solyc07g018430.3 Solanum lycopersicum HOM05D010025 ORTHO05D013126 7.4e-06 54.3 58 51.7


User provided reference genes

Program Settings