Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 8.3e-133 477.2 277 100.0
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 7.2e-129 464.2 285 95.4
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 3.4e-78 295.8 279 58.8
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 3.8e-77 292.4 208 73.1
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 7.4e-73 278.1 264 56.4
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 2.1e-72 276.6 207 67.1
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 1.4e-71 273.9 204 70.6
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 3.1e-71 272.7 207 66.2
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 2.0e-70 270.0 207 66.7
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 2.0e-70 270.0 207 66.7
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 5.8e-70 268.5 207 66.7
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 1.3e-69 267.3 206 66.5
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 8.4e-69 264.6 206 66.5
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 1.1e-68 264.2 209 66.0
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 1.1e-68 264.2 206 68.0
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 1.9e-68 263.5 202 65.8
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 4.2e-68 262.3 208 64.9
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 1.6e-67 260.4 208 64.9
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 2.1e-67 260.0 208 64.4
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 2.7e-67 259.6 191 70.2
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 3.5e-67 259.2 208 63.0
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 3.5e-67 259.2 207 64.7
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 6.0e-67 258.5 208 63.9
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 3.0e-66 256.1 207 64.3
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 5.1e-66 255.4 208 62.5
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 8.7e-66 254.6 209 60.8
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 4.3e-65 252.3 204 62.7
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 4.3e-65 252.3 211 62.1
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 1.6e-64 250.4 205 62.0
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 2.8e-64 249.6 209 59.3
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 6.3e-64 248.4 206 60.2
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 8.2e-64 248.1 207 62.3
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 1.1e-63 247.7 209 59.3
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.4e-63 247.3 207 59.4
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.4e-63 247.3 204 63.7
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 5.3e-63 245.4 207 58.9
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 5.3e-63 245.4 210 61.0
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 9.0e-63 244.6 206 62.1
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 1.2e-62 244.2 211 60.7
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.2e-62 244.2 211 60.7
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 2.0e-62 243.4 207 59.4
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 2.0e-62 243.4 203 61.1
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 2.6e-62 243.0 204 59.8
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 3.4e-62 242.7 207 58.9
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 4.5e-62 242.3 207 59.4
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 7.6e-62 241.5 211 59.7
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 7.6e-62 241.5 203 60.6
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.3e-61 240.7 211 59.7
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 1.7e-61 240.4 201 60.7
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 1.7e-61 240.4 206 58.7
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 2.2e-61 240.0 204 61.3
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.9e-61 239.6 206 58.3
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 3.8e-61 239.2 207 59.4
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 3.8e-61 239.2 208 62.5
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 8.5e-61 238.0 194 63.9
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 8.5e-61 238.0 281 51.6
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.1e-60 237.7 198 58.6
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 1.4e-60 237.3 200 60.5
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 2.5e-60 236.5 200 61.0
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 2.5e-60 236.5 210 57.6
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 3.2e-60 236.1 210 56.2
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 3.2e-60 236.1 202 59.9
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 3.2e-60 236.1 192 61.5
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 4.2e-60 235.7 200 59.5
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 5.5e-60 235.3 197 58.9
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 5.5e-60 235.3 197 58.9
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 5.5e-60 235.3 206 57.8
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 1.6e-59 233.8 197 59.4
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 1.6e-59 233.8 197 59.4
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 1.6e-59 233.8 197 59.4
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 3.6e-59 232.6 217 53.5
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 4.6e-59 232.3 191 59.2
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 7.9e-59 231.5 202 58.9
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 1.0e-58 231.1 203 57.6
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 3.0e-58 229.6 194 59.3
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 3.9e-58 229.2 201 57.7
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 8.7e-58 228.0 207 55.1
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 1.1e-57 227.6 184 61.4
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.5e-57 227.3 191 59.2
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 5.7e-57 225.3 195 57.4
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 9.7e-57 224.6 262 48.1
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.6e-56 223.8 208 56.2
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 2.2e-56 223.4 207 53.6
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 2.2e-56 223.4 188 58.5
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 4.8e-56 222.2 188 58.5
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 4.8e-56 222.2 188 58.0
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 6.3e-56 221.9 197 58.9
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 8.2e-56 221.5 191 57.6
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 3.1e-55 219.5 197 58.9
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 9.0e-55 218.0 197 58.4
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.0e-53 214.5 208 54.3
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.1e-52 211.1 202 54.5
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 7.9e-51 204.9 202 52.5
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 7.9e-51 204.9 197 53.8
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 3.0e-50 203.0 191 55.5
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 8.8e-50 201.4 198 55.1
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.9e-44 183.7 208 46.6
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.2e-44 183.0 202 48.0
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 3.7e-40 169.5 145 61.4
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 5.3e-39 165.6 194 50.5
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 7.0e-39 165.2 151 56.3
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 8.5e-37 158.3 135 60.7
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 4.7e-35 152.5 144 56.2
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.8e-31 140.6 137 52.6
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.6e-30 137.5 200 38.5
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 2.0e-30 137.1 204 39.2
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 2.2e-21 107.1 199 31.7
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 5.5e-20 102.4 190 37.9
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 6.8e-18 95.5 138 38.4
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.8e-16 90.1 71 62.0
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.1e-15 88.2 87 54.0
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.4e-15 87.8 139 37.4
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.1e-15 86.7 63 61.9
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 7.0e-15 85.5 138 34.8
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 1.2e-09 68.2 68 54.4
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 3.4e-09 66.6 68 52.9
Nn3g21845 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.8e-07 60.8 42 69.0


User provided reference genes

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