Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043808 Camellia sinensis var. sinensis HOM05D026395 ORTHO05D000004 6.2e-60 233.8 108 100.0
CSS0023702 Camellia sinensis var. sinensis HOM05D026395 ORTHO05D000004 1.0e-46 189.9 108 86.1
CSS0045151 Camellia sinensis var. sinensis HOM05D026395 ORTHO05D112969 1.7e-25 119.4 120 54.2
CSS0011043 Camellia sinensis var. sinensis HOM05D026395 ORTHO05D005201 4.7e-23 111.3 115 53.0
CSS0007662 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-14 82.8 50 72.0
CSS0009894 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-14 82.8 50 70.0
CSS0007786 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-13 78.6 50 66.0
CSS0033313 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.2e-12 73.9 50 64.0
CSS0043776 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 2.4e-11 72.4 50 64.0
CSS0003011 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.1e-11 70.5 48 64.6
CSS0010918 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-10 70.1 60 55.0
FvH4_1g24182 Fragaria vesca HOM05D000003 ORTHO05D000004 2.6e-10 68.9 83 38.6
CSS0043417 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.7e-10 67.4 50 62.0
CSS0041535 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-09 66.2 116 32.8
CSS0005822 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.5e-09 63.9 50 56.0
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 1.1e-08 63.5 88 39.8
GSVIVG01004860001 Vitis vinifera HOM05D000660 ORTHO05D000766 4.2e-08 61.6 68 42.6
Sed0015894 Sechium edule HOM05D000003 ORTHO05D000004 5.5e-08 61.2 56 46.4
MD02G1293300 Malus domestica HOM05D000003 ORTHO05D000004 9.4e-08 60.5 50 50.0
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 1.2e-07 60.1 50 48.0
ECA232G1209 Erigeron canadensis HOM05D000002 ORTHO05D000004 1.6e-07 59.7 95 31.6
Aqoxy1G03268 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.1e-07 59.3 50 50.0
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 2.1e-07 59.3 70 40.0
Atru.chr1.1905 Acer truncatum HOM05D000003 ORTHO05D000022 3.6e-07 58.5 156 27.6
ECA233G2022 Erigeron canadensis HOM05D000593 ORTHO05D000562 4.7e-07 58.2 50 48.0
PSO675G3943 Papaver somniferum HOM05D000003 ORTHO05D000004 4.7e-07 58.2 86 34.9
ECA246G3491 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.1e-07 57.8 48 47.9
MBI18_g01966_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 8.0e-07 57.4 100 34.0
PSO724G0774 Papaver somniferum HOM05D000003 ORTHO05D000004 8.0e-07 57.4 48 50.0
QL06p022241 Quercus lobata HOM05D000200 ORTHO05D000262 1.0e-06 57.0 70 38.6
SEGI_27657 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 1.0e-06 57.0 71 39.4
Aqoxy4G01729 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.4e-06 56.6 112 32.1
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 55 41.8
CSS0020881 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-06 56.2 41 63.4
ClCG07G008810 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.8e-06 56.2 50 48.0
PSO017G4751 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 48 50.0
PSO339G4890 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 83 32.5
SEGI_40534 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 1.8e-06 56.2 83 34.9
Aqoxy3G01394 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.3e-06 55.8 50 46.0
Aqoxy3G01491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.3e-06 55.8 50 46.0
Aqoxy4G01023 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.3e-06 55.8 50 46.0
MBI12_g11799_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.3e-06 55.8 55 40.0
GSVIVG01004252001 Vitis vinifera HOM05D000003 ORTHO05D000004 2.3e-06 55.8 49 49.0
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 4.0e-06 55.1 49 40.8
MBI05_g07846_MAGBIO Magnolia biondii HOM05D003982 ORTHO05D004831 4.0e-06 55.1 64 39.1
PSO210G2794 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-06 54.7 48 50.0
PSO349G0279 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-06 54.7 48 47.9
PSO782G0582 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-06 54.7 48 50.0
QL02p091725 Quercus lobata HOM05D000399 ORTHO05D000304 5.2e-06 54.7 49 51.0
Hund20535 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.2e-06 54.7 50 46.0
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.2e-06 54.7 47 51.1
Aqoxy7G01788 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.7e-06 54.3 50 42.0
CANSAT01G3175 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-06 54.3 124 26.6
Oeu024647.1 Olea europaea HOM05D000003 ORTHO05D000004 6.7e-06 54.3 75 33.3
Aqoxy2G01404 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.8e-06 53.9 50 44.0
Aqoxy2G01461 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.8e-06 53.9 50 44.0
CSS0000416 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.8e-06 53.9 82 35.4
ClCG05G019380 Citrullus lanatus HOM05D000003 ORTHO05D000004 8.8e-06 53.9 46 50.0
ECA246G0214 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.8e-06 53.9 50 42.0
PSO384G4642 Papaver somniferum HOM05D000003 ORTHO05D000004 8.8e-06 53.9 48 47.9
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 8.8e-06 53.9 70 37.1


User provided reference genes

Program Settings