Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 7.9e-98 360.5 195 100.0
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 6.7e-89 330.9 195 92.8
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 6.6e-44 181.4 234 49.1
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 4.7e-42 175.3 261 44.1
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 8.1e-42 174.5 226 49.6
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.8e-41 173.3 227 47.6
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 6.8e-41 171.4 209 52.6
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.5e-40 170.2 229 48.0
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 2.0e-40 169.9 227 48.0
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 1.7e-39 166.8 219 48.9
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 1.7e-39 166.8 195 50.3
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 4.9e-39 165.2 221 47.1
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.1e-38 164.1 220 48.6
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 3.0e-36 156.0 220 45.0
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 9.6e-35 151.0 222 45.9
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 2.8e-34 149.4 225 44.4
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 8.1e-34 147.9 222 45.5
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 8.1e-34 147.9 229 42.4
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 1.1e-33 147.5 220 43.6
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 2.6e-32 142.9 166 53.6
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 2.6e-32 142.9 225 45.3
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 1.3e-31 140.6 231 42.4
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 1.7e-31 140.2 227 41.4
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 1.7e-31 140.2 223 43.9
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 3.8e-31 139.0 223 43.9
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 4.9e-31 138.7 229 42.8
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 1.9e-30 136.7 101 69.3
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 2.4e-30 136.3 206 42.7
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 4.2e-30 135.6 224 42.0
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 2.1e-29 133.3 221 43.0
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 3.5e-29 132.5 230 40.0
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 1.7e-28 130.2 227 40.1
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 3.0e-28 129.4 234 40.6
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 8.7e-28 127.9 225 40.9
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 1.6e-26 123.6 188 43.6
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.6e-26 123.6 233 38.6
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 4.0e-25 119.0 196 40.8
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 1.2e-24 117.5 233 38.2
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 4.5e-24 115.5 222 39.2
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 9.9e-24 114.4 274 34.3
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 2.9e-23 112.8 102 59.8
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 4.9e-23 112.1 81 69.1
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 1.9e-22 110.2 201 37.8
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 6.0e-21 105.1 86 65.1
TPR.G39121 Trifolium pratense HOM05D007214 ORTHO05D008907 1.3e-20 104.0 245 35.1
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 1.8e-20 103.6 229 34.9
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 8.7e-20 101.3 208 40.4
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.1e-19 100.9 229 37.1
MELO3C030968.2 Cucumis melo HOM05D007214 ORTHO05D008907 3.3e-19 99.4 92 55.4
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 5.6e-19 98.6 200 34.5
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 9.6e-19 97.8 222 34.2
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 9.6e-19 97.8 229 36.2
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.8e-18 96.3 212 34.9
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 2.8e-18 96.3 72 66.7
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 2.8e-18 96.3 75 64.0
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 3.7e-18 95.9 216 36.1
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 3.7e-18 95.9 82 62.2
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 4.8e-18 95.5 229 37.1
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 6.2e-18 95.1 221 31.7
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 1.8e-17 93.6 108 50.0
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 3.1e-17 92.8 222 35.1
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 6.9e-17 91.7 217 32.7
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 3.4e-16 89.4 223 31.4
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 9.9e-16 87.8 223 33.2
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.3e-15 87.4 207 35.3
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 2.2e-15 86.7 222 30.6
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 3.8e-15 85.9 197 34.0
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 4.9e-15 85.5 238 34.5
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 8.4e-15 84.7 230 32.6
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 1.1e-14 84.3 224 34.8
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 1.4e-14 84.0 223 30.0
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.4e-14 84.0 223 30.0
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 1.4e-14 84.0 98 45.9
PGSC0003DMG400001300 Solanum tuberosum HOM05D007214 ORTHO05D008907 5.5e-14 82.0 151 39.7
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 7.1e-14 81.6 213 31.9
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 1.2e-13 80.9 242 31.4
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 4.6e-13 79.0 225 32.4
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 1.0e-12 77.8 218 30.7
Os06g0235900 Oryza sativa ssp. japonica HOM05D007214 ORTHO05D008907 1.8e-12 77.0 105 45.7
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 1.1e-11 74.3 68 58.8
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 1.9e-11 73.6 152 40.1
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 5.6e-11 72.0 227 30.8
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 5.6e-11 72.0 227 30.0
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 9.6e-11 71.2 224 31.2
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 1.6e-10 70.5 192 34.9
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 1.6e-10 70.5 227 30.8
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 1.6e-10 70.5 217 30.9
Rhsim12G0075800 Rhododendron simsii HOM05D000660 ORTHO05D008907 1.6e-10 70.5 76 56.6
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 2.8e-10 69.7 181 34.3
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 3.7e-10 69.3 85 49.4
FAN05G0748 Fragaria x ananassa HOM05D007214 ORTHO05D008907 3.1e-09 66.2 70 52.9
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 6.9e-09 65.1 70 55.7
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.2e-08 64.3 63 57.1
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 2.0e-08 63.5 218 30.3
TPR.G39060 Trifolium pratense HOM05D007214 ORTHO05D008907 7.6e-08 61.6 75 48.0
MSTRG.23970 Avicennia marina HOM05D007214 ORTHO05D008907 2.9e-07 59.7 46 65.2
unitig_746.g26578 Utricularia gibba HOM05D007214 ORTHO05D008907 2.9e-07 59.7 52 59.6
CsaV3_3G041890 Cucumis sativus L. HOM05D062301 ORTHO05D008907 4.9e-07 58.9 216 25.0
Rhsim07G0133800 Rhododendron simsii HOM05D004072 ORTHO05D005933 4.9e-07 58.9 83 47.0
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 9.3e-06 54.7 208 26.4


User provided reference genes

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