Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043752 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 2.1e-26 121.7 65 100.0
CAN.G1248.13 Capsicum annuum HOM05D001662 ORTHO05D007520 1.1e-19 99.4 41 95.1
SGA_v2.0_scaffold117G32418 Striga asiatica HOM05D001662 ORTHO05D007520 1.9e-19 98.6 43 88.4
Nitab4.5_0006117g0020 Nicotiana tabacum HOM05D001662 ORTHO05D007520 2.5e-19 98.2 41 92.7
Sp3g04760 Schrenkiella parvula HOM05D001662 ORTHO05D007520 2.5e-19 98.2 41 92.7
AL8G16030 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 3.2e-19 97.8 41 92.7
AT3G05870 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 3.2e-19 97.8 41 92.7
vmacro01666 Vaccinium macrocarpon HOM05D001662 ORTHO05D007520 4.2e-19 97.4 42 90.5
AUR62000480 Chenopodium quinoa HOM05D001662 ORTHO05D007520 5.5e-19 97.1 42 90.5
BcaB07g29943 Brassica carinata HOM05D001662 ORTHO05D007520 9.3e-19 96.3 42 88.1
Nitab4.5_0002516g0040 Nicotiana tabacum HOM05D001662 ORTHO05D007520 9.3e-19 96.3 42 85.7
PGR142G3386 Punica granatum HOM05D001662 ORTHO05D007520 9.3e-19 96.3 40 92.5
Medtr4g007410 Medicago truncatula HOM05D001662 ORTHO05D007520 1.2e-18 95.9 43 83.7
Ah.06g190750 Amaranthus hybridus HOM05D001662 ORTHO05D007520 1.6e-18 95.5 43 86.0
EL10Ac4g09568 Beta vulgaris HOM05D001662 ORTHO05D007520 1.6e-18 95.5 41 90.2
AUR62006823 Chenopodium quinoa HOM05D001662 ORTHO05D007520 1.6e-18 95.5 41 90.2
Lj4g0014736 Lotus japonicus HOM05D001662 ORTHO05D007520 1.6e-18 95.5 42 85.7
MD05G1140700 Malus domestica HOM05D001662 ORTHO05D007520 1.6e-18 95.5 40 90.0
Oeu062794.1 Olea europaea HOM05D001662 ORTHO05D007520 1.6e-18 95.5 41 90.2
Oeu062796.1 Olea europaea HOM05D001662 ORTHO05D007520 1.6e-18 95.5 41 90.2
Hund07269 Selenicereus undatus HOM05D001662 ORTHO05D007520 1.6e-18 95.5 41 90.2
Hund21831 Selenicereus undatus HOM05D001662 ORTHO05D007520 1.6e-18 95.5 41 90.2
PGSC0003DMG400018281 Solanum tuberosum HOM05D001662 ORTHO05D007520 1.6e-18 95.5 39 94.9
SGA_v2.0_scaffold279G46779 Striga asiatica HOM05D001662 ORTHO05D007520 1.6e-18 95.5 40 90.0
TWI36G1680 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 1.6e-18 95.5 40 90.0
Migut.D01691 Erythranthe guttata HOM05D001662 ORTHO05D007520 2.1e-18 95.1 43 83.7
MD04G1186000 Malus domestica HOM05D001662 ORTHO05D007520 2.1e-18 95.1 40 90.0
Os03g0302700 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 2.1e-18 95.1 41 87.8
Rhsim11G0105600 Rhododendron simsii HOM05D001662 ORTHO05D007520 2.1e-18 95.1 40 90.0
FAN02G1014 Fragaria x ananassa HOM05D001662 ORTHO05D007520 2.7e-18 94.7 41 87.8
FAN09G2109 Fragaria x ananassa HOM05D001662 ORTHO05D007520 2.7e-18 94.7 41 87.8
FAN14G0262 Fragaria x ananassa HOM05D001662 ORTHO05D007520 2.7e-18 94.7 41 87.8
FAN14G1181 Fragaria x ananassa HOM05D001662 ORTHO05D007520 2.7e-18 94.7 41 87.8
Nitab4.5_0001463g0140 Nicotiana tabacum HOM05D001662 ORTHO05D007520 2.7e-18 94.7 44 84.1
Sed0008097 Sechium edule HOM05D001662 ORTHO05D007520 2.7e-18 94.7 44 84.1
Actinidia01661 Actinidia chinensis HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
AL3G16630 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
CANSAT54G1905 Cannabis sativa HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
CiPaw.01G001400 Carya illinoinensis HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
Ciclev10006206m.g Citrus clementina HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
Cc10_g10070 Coffea canephora HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
DCAR_025400 Daucus carota HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
Dinv03875 Davidia involucrata HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
FAN05G0725 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.5e-18 94.4 40 87.5
Lj5g0007829 Lotus japonicus HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
Nitab4.5_0000081g0250 Nicotiana tabacum HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
Nitab4.5_0002572g0010 Nicotiana tabacum HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
Oeu061907.1 Olea europaea HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
Peaxi162Scf00585g00110 Petunia axillaris HOM05D002440 ORTHO05D002576 3.5e-18 94.4 39 92.3
TPR.G14231 Trifolium pratense HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
TPR.G3331 Trifolium pratense HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
TWI75G1241 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
GSVIVG01026815001 Vitis vinifera HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
GSVIVG01031335001 Vitis vinifera HOM05D001662 ORTHO05D007520 3.5e-18 94.4 39 92.3
Aqoxy24s001 Aquilegia oxysepala HOM05D001662 ORTHO05D007520 4.6e-18 94.0 40 87.5
BcaNung03684 Brassica carinata HOM05D001662 ORTHO05D007520 4.6e-18 94.0 41 87.8
QL03p013942 Quercus lobata HOM05D000001 ORTHO05D000003 4.6e-18 94.0 41 87.8
BcaB05g22003 Brassica carinata HOM05D001662 ORTHO05D007520 6.0e-18 93.6 41 87.8
BcaC03g17836 Brassica carinata HOM05D001662 ORTHO05D007520 6.0e-18 93.6 41 87.8
FvH4_6g08560 Fragaria vesca HOM05D001662 ORTHO05D007520 7.9e-18 93.2 39 89.7
FvH4_6g43400 Fragaria vesca HOM05D001662 ORTHO05D007520 7.9e-18 93.2 39 89.7
FAN02G1833 Fragaria x ananassa HOM05D001662 ORTHO05D007520 7.9e-18 93.2 39 89.7
RcHm_v2.0_Chr1g0321441 Rosa chinensis HOM05D001662 ORTHO05D007520 7.9e-18 93.2 39 89.7
Os07g0411200 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 1.0e-17 92.8 41 85.4
BcaNung03905 Brassica carinata HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
A02p39060 Brassica napus HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
A06p36930 Brassica napus HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
C02p58680 Brassica napus HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
C07p41570 Brassica napus HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
BolC2t11928H Brassica oleracea HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
BolC7t44690H Brassica oleracea HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
BraA02t08875Z Brassica rapa HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
ClCG09G010060 Citrullus lanatus HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
MELO3C028650.2 Cucumis melo HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
CsaV3_7G024700 Cucumis sativus L. HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
Thhalv10005548m.g Eutrema salsugineum HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
Gorai.013G252500 Gossypium raimondii HOM05D001662 ORTHO05D007520 1.3e-17 92.4 40 87.5
Prupe.2G083700 Prunus persica HOM05D001662 ORTHO05D007520 1.3e-17 92.4 41 87.8
Sed0021388 Sechium edule HOM05D001662 ORTHO05D007520 1.3e-17 92.4 39 89.7
PSO761G0719 Papaver somniferum HOM05D001662 ORTHO05D007520 2.3e-17 91.7 41 82.9
COL.COLO4_04114 Corchorus olitorius HOM05D001662 ORTHO05D007520 3.0e-17 91.3 39 89.7
Haze_15020 Corylus avellana HOM05D001662 ORTHO05D007520 3.0e-17 91.3 39 87.2
Duzib170G0793 Durio zibethinus HOM05D001662 ORTHO05D007520 3.0e-17 91.3 39 89.7
ECA236G3263 Erigeron canadensis HOM05D001662 ORTHO05D007520 3.0e-17 91.3 40 85.0
CSS0010750 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 6.7e-17 90.1 39 87.2
unitig_8.g2972 Utricularia gibba HOM05D001662 ORTHO05D007520 6.7e-17 90.1 39 84.6
SHI10338 Sapria himalayana HOM05D001662 ORTHO05D007520 8.7e-17 89.7 39 84.6
SMO356G0205 Selaginella moellendorffii HOM05D001662 ORTHO05D007520 8.7e-17 89.7 39 84.6
FAN09G4621 Fragaria x ananassa HOM05D001662 ORTHO05D007520 1.5e-16 89.0 40 82.5
Lsat_1_v5_gn_5_34581 Lactuca sativa HOM05D001662 ORTHO05D007520 1.9e-16 88.6 38 89.5
PSO729G0020 Papaver somniferum HOM05D001662 ORTHO05D007520 1.9e-16 88.6 41 80.5
THA.LOC104818757 Tarenaya hassleriana HOM05D001662 ORTHO05D007520 1.9e-16 88.6 39 87.2
MBI18_g25058_MAGBIO Magnolia biondii HOM05D001662 ORTHO05D007520 2.5e-16 88.2 39 84.6
BraA06t26618Z Brassica rapa HOM05D001662 ORTHO05D007520 9.0e-14 79.7 34 91.2
Medtr7g005900 Medicago truncatula HOM05D001662 ORTHO05D007520 3.4e-13 77.8 32 93.8
Carub.0005s0519 Capsella rubella HOM05D001662 ORTHO05D007520 1.7e-12 75.5 44 72.7
SEGI_36157 Sequoiadendron giganteum HOM05D001662 ORTHO05D007520 1.1e-11 72.8 39 69.2
AT5G26640 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 9.3e-11 69.7 34 79.4
Cre13.g590900 Chlamydomonas reinhardtii HOM05D001662 ORTHO05D007520 9.3e-11 69.7 39 66.7
Cfa026893 Carpinus fangiana HOM05D005041 ORTHO05D006003 6.1e-10 67.0 44 56.8
MCO02G295 Micromonas commoda HOM05D001662 ORTHO05D007520 3.7e-07 57.8 39 61.5


User provided reference genes

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