Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 2.9e-160 568.5 294 100.0
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.5e-119 432.6 293 78.8
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 1.2e-116 423.7 284 79.6
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 4.2e-111 405.2 275 75.6
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 6.1e-110 401.4 305 70.8
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 1.8e-109 399.8 294 72.4
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 2.6e-108 396.0 299 71.2
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 1.1e-106 390.6 295 70.5
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 2.4e-106 389.4 297 69.0
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 4.1e-106 388.7 283 70.7
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 4.1e-106 388.7 300 68.0
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 5.4e-106 388.3 290 69.7
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 7.0e-106 387.9 297 70.0
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 9.2e-106 387.5 300 69.3
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 9.2e-106 387.5 294 70.7
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 5.9e-105 384.8 294 70.4
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 1.5e-103 380.2 295 67.5
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 4.3e-103 378.6 292 67.8
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 9.5e-103 377.5 290 70.7
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 9.5e-103 377.5 290 70.7
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 2.1e-102 376.3 291 68.7
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 4.7e-102 375.2 290 70.3
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 8.0e-102 374.4 287 69.0
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 8.0e-102 374.4 267 70.8
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 1.0e-101 374.0 292 68.2
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 2.3e-101 372.9 291 70.4
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 8.9e-101 370.9 295 69.5
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 1.2e-100 370.5 285 69.8
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 1.2e-100 370.5 304 62.8
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 2.0e-100 369.8 270 72.2
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 4.4e-100 368.6 294 65.6
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 7.5e-100 367.9 293 64.5
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.3e-99 367.1 306 63.1
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 1.7e-99 366.7 231 79.7
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 2.9e-99 365.9 267 69.3
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 1.4e-98 363.6 230 79.6
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 1.4e-98 363.6 292 65.4
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 2.4e-98 362.8 293 66.6
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 2.4e-98 362.8 306 62.4
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 2.4e-98 362.8 306 62.4
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 3.2e-98 362.5 294 66.3
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 4.1e-98 362.1 294 66.7
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 9.2e-98 360.9 295 66.1
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 1.2e-97 360.5 296 67.2
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 2.7e-97 359.4 235 75.3
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 4.6e-97 358.6 296 66.9
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 6.6e-96 354.8 314 60.8
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 8.6e-96 354.4 292 65.1
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 1.9e-95 353.2 243 74.5
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 2.5e-95 352.8 267 67.8
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 2.5e-95 352.8 259 68.3
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 4.3e-95 352.1 300 66.7
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 4.3e-95 352.1 238 74.4
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 1.2e-94 350.5 287 66.6
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 2.1e-94 349.7 288 64.6
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 4.7e-94 348.6 237 74.7
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 6.2e-94 348.2 340 56.5
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 1.4e-93 347.1 307 62.2
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 3.1e-93 345.9 305 60.7
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 8.9e-93 344.4 268 66.8
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 2.0e-92 343.2 286 63.6
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 2.6e-92 342.8 227 74.9
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 2.6e-92 342.8 227 74.9
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 9.8e-92 340.9 249 67.9
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 2.9e-91 339.3 249 67.5
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 3.7e-91 339.0 286 63.6
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 4.9e-91 338.6 266 66.9
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 4.6e-89 332.0 244 70.1
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 6.0e-89 331.6 223 75.3
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 6.0e-89 331.6 294 59.9
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 6.0e-89 331.6 294 59.9
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 6.0e-89 331.6 294 59.9
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 7.8e-89 331.3 294 61.6
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 5.0e-88 328.6 261 63.6
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 5.0e-88 328.6 261 63.6
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 1.1e-87 327.4 297 61.6
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 2.5e-87 326.2 278 61.9
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 5.6e-87 325.1 253 68.0
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 9.5e-87 324.3 283 59.4
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 1.2e-86 323.9 293 59.4
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 2.1e-86 323.2 299 58.2
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 2.8e-86 322.8 299 59.2
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 4.7e-86 322.0 292 59.2
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 4.7e-86 322.0 258 64.0
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 6.2e-86 321.6 264 62.5
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 8.1e-86 321.2 269 62.1
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 1.1e-85 320.9 292 58.9
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 2.3e-85 319.7 230 69.6
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 3.1e-85 319.3 291 60.8
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 6.8e-85 318.2 273 63.7
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.5e-84 317.0 292 59.2
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 1.3e-83 313.9 303 56.1
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 1.3e-83 313.9 230 69.1
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 1.7e-83 313.5 247 67.2
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 4.9e-83 312.0 291 59.1
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 8.3e-83 311.2 234 66.7
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.4e-82 310.5 223 70.0
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.7e-80 303.5 298 58.7
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 1.4e-77 293.9 248 65.7
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 8.6e-72 274.6 242 62.0
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 3.1e-69 266.2 276 53.3
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 4.3e-63 245.7 260 56.2
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 4.5e-60 235.7 160 70.6
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 6.0e-49 198.7 203 56.7
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 6.7e-48 195.3 148 65.5
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 3.3e-47 193.0 209 49.3
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 9.0e-45 184.9 188 54.3
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 9.0e-45 184.9 225 46.7
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 5.8e-44 182.2 193 48.2
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 1.9e-42 177.2 196 48.0
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 9.3e-42 174.9 208 48.1
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 4.3e-39 166.0 153 58.2
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 7.6e-36 155.2 130 63.8
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 3.2e-34 149.8 195 40.5
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 3.0e-32 143.3 86 74.4
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 6.9e-29 132.1 91 70.3
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 1.2e-28 131.3 98 68.4
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 1.6e-25 120.9 87 70.1
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 2.2e-19 100.5 155 41.9
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 3.9e-16 89.7 60 70.0
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 4.4e-15 86.3 106 52.8
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 1.1e-13 81.6 192 28.1
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 1.0e-11 75.1 48 72.9
MCO09G217 Micromonas commoda HOM05D006484 ORTHO05D008002 1.3e-06 58.2 171 27.5
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 1.7e-06 57.8 34 79.4


User provided reference genes

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