Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043735 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 1.2e-100 369.8 185 100.0
Hma1.2p1_0712F.1_g207550 Hydrangea macrophylla HOM05D007156 ORTHO05D003871 4.7e-23 112.1 124 53.2
CSS0000680 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 4.0e-22 109.0 130 54.6
Dinv18559 Davidia involucrata HOM05D007156 ORTHO05D003871 2.4e-19 99.8 116 53.4
CiPaw.03G165400 Carya illinoinensis HOM05D007156 ORTHO05D003871 1.0e-17 94.4 121 47.9
Actinidia12482 Actinidia chinensis HOM05D007156 ORTHO05D003871 2.5e-16 89.7 87 60.9
Haze_12992 Corylus avellana HOM05D007156 ORTHO05D003871 2.7e-15 86.3 115 47.0
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 4.7e-15 85.5 115 46.1
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 5.2e-14 82.0 122 44.3
Gorai.012G132600 Gossypium raimondii HOM05D007156 ORTHO05D003871 1.2e-13 80.9 117 42.7
Thecc.02G165500 Theobroma cacao HOM05D007156 ORTHO05D003871 4.4e-13 79.0 119 47.1
COL.COLO4_13040 Corchorus olitorius HOM05D007156 ORTHO05D003871 7.5e-13 78.2 113 47.8
Glyma.13G304200 Glycine max HOM05D007156 ORTHO05D003871 1.3e-12 77.4 122 40.2
Gohir.A04G106700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 2.8e-12 76.3 118 43.2
Potri.019G125100 Populus trichocarpa HOM05D007156 ORTHO05D003871 4.8e-12 75.5 63 66.7
QL08p034497 Quercus lobata HOM05D007156 ORTHO05D003871 4.8e-12 75.5 114 43.0
Psat7g163320 Pisum sativum HOM05D007156 ORTHO05D003871 8.3e-12 74.7 128 43.0
Sabra13G0122400 Salix brachista HOM05D007156 ORTHO05D003871 8.3e-12 74.7 63 66.7
Cpa.g.sc34.47 Carica papaya HOM05D007156 ORTHO05D003871 1.1e-11 74.3 110 46.4
Prupe.3G223500 Prunus persica HOM05D007156 ORTHO05D003871 1.1e-11 74.3 119 45.4
VMungo1080G0311 Vigna mungo HOM05D007156 ORTHO05D003871 3.1e-11 72.8 118 39.8
CiPaw.04G120100 Carya illinoinensis HOM05D007156 ORTHO05D003871 4.1e-11 72.4 119 42.0
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 4.1e-11 72.4 124 41.1
Manes.12G077701 Manihot esculenta HOM05D007156 ORTHO05D003871 5.4e-11 72.0 114 45.6
Migut.M00380 Erythranthe guttata HOM05D007156 ORTHO05D003871 9.1e-11 71.2 103 44.7
TPR.G19047 Trifolium pratense HOM05D007156 ORTHO05D003871 9.1e-11 71.2 83 54.2
Sed0007405 Sechium edule HOM05D007156 ORTHO05D003871 1.6e-10 70.5 116 41.4
Lj3g0000666 Lotus japonicus HOM05D007156 ORTHO05D003871 2.7e-10 69.7 124 37.9
TPR.G18057 Trifolium pratense HOM05D007156 ORTHO05D003871 3.5e-10 69.3 121 43.0
Glyma.06G301200 Glycine max HOM05D007156 ORTHO05D003871 4.5e-10 68.9 126 40.5
Medtr0945s0020 Medicago truncatula HOM05D007156 ORTHO05D003871 4.5e-10 68.9 114 40.4
Phvul.005G111100 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 4.5e-10 68.9 124 37.9
Sabra19G0123400 Salix brachista HOM05D007156 ORTHO05D003871 5.9e-10 68.6 75 56.0
Dinv13866 Davidia involucrata HOM05D039772 ORTHO05D003871 7.7e-10 68.2 115 42.6
FAN05G2387 Fragaria x ananassa HOM05D007156 ORTHO05D003871 7.7e-10 68.2 117 44.4
Glyma.12G103200 Glycine max HOM05D007156 ORTHO05D003871 7.7e-10 68.2 130 40.8
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 7.7e-10 68.2 66 59.1
Gohir.D02G185700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 1.0e-09 67.8 115 41.7
Gorai.005G208200 Gossypium raimondii HOM05D007156 ORTHO05D003871 1.0e-09 67.8 115 41.7
Gohir.A03G162600 Gossypium hirsutum HOM05D007156 ORTHO05D003871 1.3e-09 67.4 115 41.7
RcHm_v2.0_Chr2g0160641 Rosa chinensis HOM05D007156 ORTHO05D003871 1.3e-09 67.4 118 41.5
CAN.G86.35 Capsicum annuum HOM05D007156 ORTHO05D003871 1.7e-09 67.0 92 48.9
FAN02G1242 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.7e-09 67.0 117 43.6
FAN09G0550 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.7e-09 67.0 117 43.6
TAR271G0004 Trochodendron aralioides HOM05D007156 ORTHO05D003871 1.7e-09 67.0 114 40.4
FvH4_6g43890 Fragaria vesca HOM05D007156 ORTHO05D003871 2.3e-09 66.6 117 43.6
FAN14G5947 Fragaria x ananassa HOM05D007156 ORTHO05D003871 2.3e-09 66.6 117 43.6
Lalb_Chr24g0393601 Lupinus albus HOM05D007156 ORTHO05D003871 2.3e-09 66.6 119 40.3
MBI02_g42365_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.3e-09 66.6 111 41.4
MBI02_g43089_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.3e-09 66.6 111 41.4
MD09G1102100 Malus domestica HOM05D007156 ORTHO05D003871 3.8e-09 65.9 113 39.8
MD09G1127500 Malus domestica HOM05D007156 ORTHO05D003871 3.8e-09 65.9 116 39.7
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 5.0e-09 65.5 57 59.6
Nitab4.5_0009996g0020 Nicotiana tabacum HOM05D007156 ORTHO05D003871 6.5e-09 65.1 118 39.8
PGSC0003DMG400026188 Solanum tuberosum HOM05D007156 ORTHO05D003871 8.6e-09 64.7 113 38.1
MSTRG.6540 Avicennia marina HOM05D007156 ORTHO05D003871 1.1e-08 64.3 119 37.0
ClCG02G001520 Citrullus lanatus HOM05D007156 ORTHO05D003871 1.1e-08 64.3 54 63.0
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.1e-08 64.3 110 37.3
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.1e-08 64.3 110 37.3
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.1e-08 64.3 117 35.9
Potri.013G152300 Populus trichocarpa HOM05D007156 ORTHO05D003871 1.1e-08 64.3 57 59.6
Psat5g266920 Pisum sativum HOM05D007156 ORTHO05D003871 1.5e-08 63.9 57 54.4
Sopen07g026540 Solanum pennellii HOM05D007156 ORTHO05D003871 1.5e-08 63.9 95 46.3
Rhsim06G0154900 Rhododendron simsii HOM05D007156 ORTHO05D003871 2.5e-08 63.2 132 37.9
Sabra19G0131200 Salix brachista HOM05D007156 ORTHO05D003871 2.5e-08 63.2 49 69.4
CSS0048777 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 3.2e-08 62.8 110 38.2
Lj3g0015957 Lotus japonicus HOM05D007156 ORTHO05D003871 3.2e-08 62.8 128 42.2
Nitab4.5_0001302g0030 Nicotiana tabacum HOM05D007156 ORTHO05D003871 4.2e-08 62.4 75 46.7
Atru.chr6.3108 Acer truncatum HOM05D007156 ORTHO05D003871 5.5e-08 62.0 116 40.5
Dinv17859 Davidia involucrata HOM05D001601 ORTHO05D006936 5.5e-08 62.0 96 46.9
Solyc07g052990.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 5.5e-08 62.0 80 45.0
Nn2g11286 Nelumbo nucifera HOM05D007156 ORTHO05D003871 9.5e-08 61.2 56 55.4
SGA_v2.0_scaffold70G23435 Striga asiatica HOM05D007156 ORTHO05D003871 9.5e-08 61.2 71 47.9
Peaxi162Scf00012g00273 Petunia axillaris HOM05D007156 ORTHO05D003871 1.6e-07 60.5 72 48.6
Eucgr.A01740 Eucalyptus grandis HOM05D007156 ORTHO05D003871 2.1e-07 60.1 40 72.5
Dinv10890 Davidia involucrata HOM05D039772 ORTHO05D178898 2.8e-07 59.7 90 43.3
MBI18_g38397_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.8e-07 59.7 59 49.2
Cc05_g05520 Coffea canephora HOM05D007156 ORTHO05D003871 4.7e-07 58.9 128 35.9
Rhsim02G0116500 Rhododendron simsii HOM05D007156 ORTHO05D003871 1.4e-06 57.4 56 57.1
ATR0804G053 Amborella trichopoda HOM05D007156 ORTHO05D003871 1.8e-06 57.0 96 40.6
CsaV3_7G003930 Cucumis sativus L. HOM05D007156 ORTHO05D003871 1.8e-06 57.0 107 38.3
unitig_746.g26730 Utricularia gibba HOM05D007156 ORTHO05D003871 1.8e-06 57.0 86 36.0
Ca_01559_v3 Cicer arietinum L. HOM05D007156 ORTHO05D003871 3.0e-06 56.2 47 61.7
ClCG02G011170 Citrullus lanatus HOM05D007156 ORTHO05D003871 3.0e-06 56.2 112 34.8
PGSC0003DMG400013754 Solanum tuberosum HOM05D007156 ORTHO05D003871 3.0e-06 56.2 101 38.6
Eucgr.B02728 Eucalyptus grandis HOM05D007866 ORTHO05D003871 5.2e-06 55.5 77 41.6
Solyc12g005690.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 5.2e-06 55.5 121 35.5
THA.LOC104816660 Tarenaya hassleriana HOM05D007866 ORTHO05D003871 5.2e-06 55.5 96 37.5
Thecc.06G206300 Theobroma cacao HOM05D001601 ORTHO05D006936 5.2e-06 55.5 107 36.4
Sed0003235 Sechium edule HOM05D007156 ORTHO05D003871 6.8e-06 55.1 52 51.9
Nitab4.5_0005140g0010 Nicotiana tabacum HOM05D007156 ORTHO05D003871 8.8e-06 54.7 108 42.6
PGSC0003DMG400021719 Solanum tuberosum HOM05D001601 ORTHO05D006936 8.8e-06 54.7 46 56.5
unitig_899.g15247 Utricularia gibba HOM05D007156 ORTHO05D003871 8.8e-06 54.7 70 48.6


User provided reference genes

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