Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 2.0e-141 505.8 257 100.0
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 3.3e-136 488.4 257 96.9
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 9.2e-102 374.0 250 77.6
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 5.7e-96 354.8 246 75.2
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 5.7e-96 354.8 250 72.8
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 6.4e-95 351.3 248 72.2
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 8.3e-95 350.9 250 70.4
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.2e-93 347.1 250 70.0
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 1.6e-93 346.7 248 70.2
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 1.7e-92 343.2 251 70.1
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 7.3e-91 337.8 251 69.7
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 9.5e-91 337.4 251 68.9
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 1.4e-89 333.6 250 68.0
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 4.0e-89 332.0 250 68.8
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 5.2e-89 331.6 246 69.9
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 8.9e-89 330.9 250 66.4
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 4.4e-88 328.6 245 69.0
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 1.7e-87 326.6 250 68.0
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 2.2e-87 326.2 245 68.2
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.2e-87 326.2 250 68.0
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.2e-87 326.2 250 67.6
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 6.4e-87 324.7 250 67.6
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 1.1e-86 323.9 251 67.7
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 3.2e-86 322.4 242 70.2
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 4.1e-86 322.0 248 63.3
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 4.1e-86 322.0 244 66.4
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 9.2e-86 320.9 250 64.4
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 2.0e-85 319.7 256 65.2
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 2.0e-85 319.7 244 65.6
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 2.7e-85 319.3 246 65.4
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 2.7e-85 319.3 245 64.9
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 2.7e-85 319.3 244 65.6
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 6.0e-85 318.2 246 65.0
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 6.0e-85 318.2 243 67.9
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 7.8e-85 317.8 243 65.4
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 1.3e-84 317.0 250 66.8
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 1.7e-84 316.6 244 64.8
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 3.0e-84 315.8 250 62.4
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 3.0e-84 315.8 243 65.8
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 8.6e-84 314.3 247 68.4
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 1.9e-83 313.2 250 64.8
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 4.3e-83 312.0 235 66.0
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 4.3e-83 312.0 256 62.1
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 9.5e-83 310.8 250 64.4
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 1.2e-82 310.5 247 65.2
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 2.8e-82 309.3 245 63.7
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 3.6e-82 308.9 235 65.5
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 6.2e-82 308.1 245 63.7
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 5.2e-81 305.1 224 68.8
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 1.2e-80 303.9 250 63.6
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.5e-80 303.5 224 68.3
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 3.4e-80 302.4 247 64.0
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 7.5e-80 301.2 247 65.6
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 1.7e-79 300.1 250 63.6
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 4.9e-79 298.5 250 63.2
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 8.3e-79 297.7 245 60.4
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 1.4e-78 297.0 247 59.9
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 1.9e-78 296.6 229 63.3
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.9e-78 296.6 250 62.8
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 1.9e-78 296.6 247 59.5
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 5.4e-78 295.0 239 63.2
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 1.2e-77 293.9 247 62.3
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 1.2e-77 293.9 257 58.8
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 2.3e-76 289.7 224 62.5
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 3.0e-76 289.3 255 58.4
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 5.1e-76 288.5 255 61.6
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 6.6e-76 288.1 244 58.2
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 1.5e-75 287.0 227 63.4
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 1.9e-75 286.6 225 62.2
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 1.9e-75 286.6 254 58.3
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 1.9e-75 286.6 257 57.2
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 4.3e-75 285.4 255 57.3
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 5.6e-75 285.0 250 60.0
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 7.3e-75 284.6 240 60.4
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 7.3e-75 284.6 255 58.0
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 9.5e-75 284.3 257 56.8
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 9.5e-75 284.3 257 56.8
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 1.6e-74 283.5 243 61.7
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 2.1e-74 283.1 225 61.8
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 2.8e-74 282.7 257 56.8
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 2.8e-74 282.7 255 57.3
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 1.1e-73 280.8 251 58.2
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 1.4e-73 280.4 247 59.9
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 4.0e-73 278.9 240 59.2
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 4.0e-73 278.9 252 57.5
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 8.9e-73 277.7 247 59.5
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 1.7e-71 273.5 242 57.0
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 8.4e-71 271.2 258 57.4
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 2.4e-70 269.6 232 58.2
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 3.2e-70 269.2 200 68.5
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 2.1e-69 266.5 202 63.9
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 6.2e-66 255.0 225 59.1
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 1.3e-60 237.3 158 69.6
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 1.6e-58 230.3 219 51.1
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.4e-57 227.3 226 50.9
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 1.5e-56 223.8 289 42.2
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 5.4e-54 215.3 200 55.0
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 3.0e-52 209.5 261 44.8
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 3.0e-44 183.0 171 52.0
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 3.3e-43 179.5 191 47.1
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 1.1e-38 164.5 110 71.8
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 4.6e-37 159.1 100 76.0
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.1e-35 154.5 182 51.6
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 9.0e-33 144.8 99 71.7
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 2.9e-31 139.8 150 50.0
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 1.5e-27 127.5 91 69.2
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 4.3e-27 125.9 137 46.0
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 1.3e-23 114.4 161 39.8
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 2.1e-21 107.1 216 36.1
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 5.3e-17 92.4 252 29.8
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 5.5e-14 82.4 227 31.7
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 5.2e-12 75.9 95 40.0
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 2.9e-07 60.1 50 66.0


User provided reference genes

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