Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 3.8e-37 157.5 73 100.0
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.1e-31 139.4 69 88.4
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.1e-31 139.4 69 88.4
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 1.4e-31 139.0 69 89.9
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 2.4e-31 138.3 69 89.9
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 3.1e-31 137.9 69 89.9
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 5.3e-31 137.1 69 88.4
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 9.1e-31 136.3 70 88.6
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.2e-30 136.0 69 85.5
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 1.2e-30 136.0 69 88.4
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.2e-30 136.0 69 88.4
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.0e-30 135.2 69 87.0
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 2.7e-30 134.8 69 84.1
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 2.7e-30 134.8 69 85.5
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 3.5e-30 134.4 69 88.4
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 3.5e-30 134.4 70 87.1
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 3.5e-30 134.4 69 85.5
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 5.9e-30 133.7 69 84.1
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 5.9e-30 133.7 69 84.1
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 1.0e-29 132.9 69 82.6
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.0e-29 132.9 78 80.8
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 1.3e-29 132.5 69 85.5
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 1.7e-29 132.1 69 84.1
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 1.7e-29 132.1 68 86.8
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 1.7e-29 132.1 69 84.1
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 2.2e-29 131.7 69 87.0
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 3.8e-29 131.0 69 85.5
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 5.0e-29 130.6 69 85.5
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 5.0e-29 130.6 69 84.1
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 5.0e-29 130.6 71 81.7
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 8.5e-29 129.8 69 82.6
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 8.5e-29 129.8 69 82.6
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 8.5e-29 129.8 69 81.2
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.5e-28 129.0 69 81.2
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 1.9e-28 128.6 69 81.2
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.9e-28 128.6 69 85.5
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 1.9e-28 128.6 69 81.2
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 2.5e-28 128.3 69 82.6
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 2.5e-28 128.3 69 82.6
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 3.2e-28 127.9 68 79.4
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 4.2e-28 127.5 69 79.7
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 4.2e-28 127.5 69 82.6
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 5.5e-28 127.1 69 81.2
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 5.5e-28 127.1 69 84.1
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 7.2e-28 126.7 69 84.1
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 1.2e-27 125.9 69 79.7
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 1.2e-27 125.9 69 76.8
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 1.2e-27 125.9 69 76.8
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 1.6e-27 125.6 66 84.8
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 1.6e-27 125.6 69 79.7
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 1.6e-27 125.6 69 79.7
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 1.6e-27 125.6 69 79.7
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 1.6e-27 125.6 69 79.7
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.7e-27 124.8 63 85.7
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 2.7e-27 124.8 69 79.7
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 3.6e-27 124.4 72 76.4
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 4.7e-27 124.0 69 81.2
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 4.7e-27 124.0 69 81.2
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 6.1e-27 123.6 69 78.3
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 6.1e-27 123.6 69 78.3
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.4e-26 122.5 69 79.7
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.4e-26 122.5 69 76.8
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 1.8e-26 122.1 69 76.8
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 5.2e-26 120.6 69 78.3
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 6.8e-26 120.2 70 77.1
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 6.8e-26 120.2 71 73.2
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 6.8e-26 120.2 71 73.2
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 8.8e-26 119.8 63 77.8
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 8.8e-26 119.8 69 73.9
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.2e-25 119.4 69 71.0
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 1.2e-25 119.4 69 76.8
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.5e-25 119.0 69 75.4
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 1.5e-25 119.0 69 75.4
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 1.5e-25 119.0 69 75.4
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.5e-25 119.0 69 75.4
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.5e-25 119.0 69 75.4
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-25 119.0 69 75.4
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 2.6e-25 118.2 69 75.4
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 2.6e-25 118.2 69 75.4
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 2.6e-25 118.2 69 75.4
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 2.6e-25 118.2 69 75.4
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 2.6e-25 118.2 69 75.4
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 2.6e-25 118.2 69 75.4
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 3.4e-25 117.9 69 73.9
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 3.4e-25 117.9 69 73.9
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 5.7e-25 117.1 73 71.2
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 5.7e-25 117.1 73 71.2
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 9.8e-25 116.3 69 75.4
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 9.8e-25 116.3 73 71.2
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 9.8e-25 116.3 69 72.5
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.3e-24 115.9 69 71.0
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 1.7e-24 115.5 67 74.6
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.8e-24 114.8 69 72.5
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.8e-24 114.8 69 72.5
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 3.7e-24 114.4 69 73.9
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.9e-24 114.0 69 72.5
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 6.3e-24 113.6 69 71.0
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 6.3e-24 113.6 69 72.5
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 6.3e-24 113.6 69 72.5
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.4e-23 112.5 69 71.0
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.1e-23 110.9 69 71.0
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 5.4e-23 110.5 62 75.8
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 5.4e-23 110.5 62 75.8
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 7.0e-23 110.2 69 72.5
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 9.1e-23 109.8 57 84.2
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.6e-22 109.0 69 65.2
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.7e-22 108.2 69 68.1
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.7e-22 108.2 69 65.2
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.5e-22 107.8 69 68.1
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.5e-22 107.8 69 68.1
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.5e-22 107.8 69 68.1
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 5.9e-22 107.1 69 63.8
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.7e-21 105.5 69 72.5
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.3e-21 105.1 63 69.8
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 3.8e-21 104.4 69 65.2
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 6.6e-21 103.6 58 74.1
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.5e-20 100.5 63 66.7
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.4e-18 95.9 67 55.2
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 2.3e-18 95.1 62 69.4
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 3.0e-18 94.7 58 74.1
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.0e-18 94.7 46 84.8
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 6.4e-08 60.5 69 43.5
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.1e-07 59.7 69 40.6
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 4.1e-07 57.8 69 40.6


User provided reference genes

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