Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 2.8e-91 338.6 168 100.0
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 2.6e-73 278.9 159 88.1
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 2.5e-68 262.3 159 83.6
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 3.1e-66 255.4 160 81.9
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 9.0e-66 253.8 160 81.9
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 1.2e-65 253.4 169 76.9
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 2.6e-65 252.3 160 81.2
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 1.0e-64 250.4 166 79.5
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 3.8e-64 248.4 157 78.3
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 6.5e-64 247.7 159 79.9
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 9.3e-63 243.8 157 79.0
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.6e-62 243.0 159 78.0
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.6e-62 243.0 159 78.0
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 2.7e-62 242.3 157 75.8
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 2.7e-62 242.3 159 75.5
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 3.5e-62 241.9 159 78.0
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 7.9e-62 240.7 159 75.5
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 1.0e-61 240.4 159 76.1
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 1.0e-61 240.4 162 75.9
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.8e-61 239.6 159 77.4
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 1.8e-61 239.6 157 75.2
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 1.8e-61 239.6 167 77.2
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 3.0e-61 238.8 160 75.0
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 3.0e-61 238.8 162 76.5
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 3.0e-61 238.8 161 76.4
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 3.9e-61 238.4 159 74.2
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 5.1e-61 238.0 157 77.1
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 5.1e-61 238.0 163 75.5
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 5.1e-61 238.0 159 76.7
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 8.7e-61 237.3 160 75.6
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 8.7e-61 237.3 157 73.9
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 1.5e-60 236.5 161 77.0
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 1.5e-60 236.5 160 75.6
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 1.5e-60 236.5 160 75.6
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 1.9e-60 236.1 163 74.8
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 1.9e-60 236.1 159 76.1
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 2.5e-60 235.7 162 74.7
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 3.3e-60 235.3 161 73.9
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 7.4e-60 234.2 160 73.8
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 9.7e-60 233.8 166 71.7
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 2.2e-59 232.6 157 73.9
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 2.2e-59 232.6 159 74.2
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 2.2e-59 232.6 159 74.2
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 2.2e-59 232.6 160 73.8
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 3.7e-59 231.9 163 74.8
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 6.3e-59 231.1 162 73.5
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 8.2e-59 230.7 160 72.5
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 1.1e-58 230.3 162 74.1
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 2.4e-58 229.2 161 75.2
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 3.1e-58 228.8 159 74.2
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 5.3e-58 228.0 162 72.8
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 5.3e-58 228.0 162 71.0
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 9.0e-58 227.3 160 73.1
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.5e-57 226.5 157 73.2
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 1.5e-57 226.5 159 72.3
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 2.0e-57 226.1 160 75.0
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 2.6e-57 225.7 154 72.1
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 2.6e-57 225.7 159 72.3
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 2.6e-57 225.7 159 72.3
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 2.6e-57 225.7 157 73.2
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 3.4e-57 225.3 158 72.8
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 4.5e-57 224.9 161 74.5
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 4.5e-57 224.9 159 72.3
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 4.5e-57 224.9 159 74.2
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 4.5e-57 224.9 159 72.3
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 5.9e-57 224.6 158 70.9
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.0e-56 223.8 154 71.4
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 1.0e-56 223.8 154 71.4
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 1.3e-56 223.4 159 71.7
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 1.3e-56 223.4 159 71.7
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 1.7e-56 223.0 154 70.8
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 2.2e-56 222.6 141 76.6
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 2.9e-56 222.2 158 72.8
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 2.9e-56 222.2 159 73.6
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 3.8e-56 221.9 159 71.1
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 3.8e-56 221.9 159 71.1
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 8.5e-56 220.7 161 70.2
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 1.1e-55 220.3 159 70.4
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 5.5e-55 218.0 159 69.2
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 1.6e-54 216.5 187 63.1
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 1.6e-54 216.5 155 70.3
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 2.1e-54 216.1 159 69.8
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 3.6e-54 215.3 187 63.6
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 1.8e-53 213.0 161 69.6
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 3.0e-53 212.2 157 68.2
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 1.5e-52 209.9 169 66.3
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 1.3e-51 206.8 110 86.4
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 6.3e-51 204.5 124 83.1
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 2.4e-50 202.6 107 86.0
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 1.5e-49 199.9 154 66.2
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 1.0e-48 197.2 178 60.1
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 1.0e-48 197.2 138 69.6
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 8.8e-45 184.1 101 88.1
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 1.7e-43 179.9 158 62.7
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 2.5e-31 139.4 73 87.7
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 7.0e-26 121.3 97 68.0
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 9.1e-26 120.9 105 65.7
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 2.1e-22 109.8 55 87.3
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 5.2e-21 105.1 94 60.6
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 6.8e-21 104.8 55 81.8
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 5.7e-20 101.7 78 70.5
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 2.0e-17 93.2 47 89.4
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 5.9e-17 91.7 54 79.6
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 1.0e-16 90.9 47 87.2
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 3.8e-16 89.0 83 63.9
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 1.1e-10 70.9 73 56.2


User provided reference genes

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