Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 2.7e-29 131.3 66 100.0
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 8.9e-09 63.2 70 52.9
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 1.2e-08 62.8 68 54.4
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 4.4e-08 60.8 68 54.4
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 5.8e-08 60.5 68 52.9
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 5.8e-08 60.5 68 52.9
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 7.5e-08 60.1 68 52.9
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 9.8e-08 59.7 68 51.5
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 9.8e-08 59.7 77 46.8
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 9.8e-08 59.7 68 52.9
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 9.8e-08 59.7 77 46.8
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 1.3e-07 59.3 68 52.9
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.7e-07 58.9 68 51.5
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.7e-07 58.9 77 46.8
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 1.7e-07 58.9 68 50.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 2.9e-07 58.2 68 51.5
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 2.9e-07 58.2 68 51.5
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 2.9e-07 58.2 67 50.7
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.7e-07 57.8 77 45.5
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.7e-07 57.8 77 45.5
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 4.9e-07 57.4 68 50.0
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 4.9e-07 57.4 75 45.3
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 4.9e-07 57.4 65 49.2
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 6.4e-07 57.0 65 50.8
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 6.4e-07 57.0 68 50.0
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 8.3e-07 56.6 77 45.5
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 8.3e-07 56.6 63 50.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 1.1e-06 56.2 68 51.5
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 1.1e-06 56.2 68 51.5
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.1e-06 56.2 65 50.8
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.1e-06 56.2 68 50.0
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.1e-06 56.2 68 51.5
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.1e-06 56.2 68 50.0
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 1.1e-06 56.2 68 51.5
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 1.4e-06 55.8 68 51.5
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.4e-06 55.8 68 51.5
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.4e-06 55.8 66 48.5
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 1.4e-06 55.8 63 49.2
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 1.4e-06 55.8 63 49.2
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.4e-06 55.8 63 49.2
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 1.4e-06 55.8 67 47.8
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.4e-06 55.8 68 48.5
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 1.9e-06 55.5 74 44.6
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 1.9e-06 55.5 68 48.5
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 2.4e-06 55.1 76 43.4
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.4e-06 55.1 74 44.6
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.4e-06 55.1 74 44.6
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 2.4e-06 55.1 76 43.4
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 2.4e-06 55.1 74 44.6
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.4e-06 55.1 79 44.3
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 2.4e-06 55.1 76 43.4
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 2.4e-06 55.1 76 43.4
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 2.4e-06 55.1 76 43.4
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 2.4e-06 55.1 74 44.6
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 3.2e-06 54.7 68 50.0
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 3.2e-06 54.7 68 50.0
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 3.2e-06 54.7 63 47.6
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 3.2e-06 54.7 74 47.3
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 4.1e-06 54.3 68 50.0
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 4.1e-06 54.3 63 50.8
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 4.1e-06 54.3 74 43.2
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 4.1e-06 54.3 65 47.7
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 5.4e-06 53.9 66 50.0
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 5.4e-06 53.9 74 44.6
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 5.4e-06 53.9 79 43.0
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 5.4e-06 53.9 72 45.8
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 7.0e-06 53.5 65 49.2
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 7.0e-06 53.5 68 48.5
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 7.0e-06 53.5 62 50.0
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 7.0e-06 53.5 76 42.1
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 7.0e-06 53.5 77 42.9


User provided reference genes

Program Settings