Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 3.6e-67 258.1 128 100.0
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.0e-65 252.3 128 97.7
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 3.5e-54 214.9 126 82.5
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.8e-50 202.6 123 78.9
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.2e-49 199.9 123 77.2
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 1.2e-49 199.9 120 80.8
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.3e-48 196.4 123 75.6
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 1.4e-47 193.0 121 74.4
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 1.4e-47 193.0 121 76.9
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.9e-47 192.6 127 74.0
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 1.9e-47 192.6 118 75.4
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 2.5e-47 192.2 110 83.6
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 2.5e-47 192.2 120 75.0
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 3.2e-47 191.8 130 73.8
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 5.5e-47 191.0 125 74.4
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 5.5e-47 191.0 127 71.7
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 1.2e-46 189.9 121 74.4
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.2e-46 189.9 120 73.3
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.2e-46 189.9 130 73.1
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 2.7e-46 188.7 118 76.3
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 3.5e-46 188.3 120 74.2
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 1.0e-45 186.8 120 75.0
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.3e-45 186.4 128 69.5
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 1.3e-45 186.4 119 74.8
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 1.3e-45 186.4 117 75.2
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.8e-45 186.0 119 73.9
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 3.9e-45 184.9 120 70.8
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.9e-45 184.9 126 71.4
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 5.1e-45 184.5 118 76.3
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 6.7e-45 184.1 120 70.8
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 6.7e-45 184.1 119 73.1
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 8.7e-45 183.7 121 72.7
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 8.7e-45 183.7 133 71.4
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.1e-44 183.3 127 70.1
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 1.9e-44 182.6 123 73.2
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 3.3e-44 181.8 122 68.9
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 4.3e-44 181.4 119 73.1
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 4.3e-44 181.4 126 69.8
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 5.7e-44 181.0 120 70.8
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 7.4e-44 180.6 118 73.7
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 7.4e-44 180.6 120 73.3
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.3e-43 179.9 122 70.5
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 1.3e-43 179.9 119 72.3
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 2.2e-43 179.1 110 78.2
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 2.2e-43 179.1 119 71.4
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 4.8e-43 177.9 120 69.2
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 4.8e-43 177.9 120 70.8
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 4.8e-43 177.9 120 73.3
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 6.3e-43 177.6 130 68.5
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.8e-42 176.0 126 67.5
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 2.4e-42 175.6 121 65.3
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 4.1e-42 174.9 120 66.7
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 6.9e-42 174.1 116 69.8
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 9.0e-42 173.7 119 65.5
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 9.0e-42 173.7 120 66.7
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 4.5e-41 171.4 118 69.5
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 7.7e-41 170.6 119 63.9
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 1.0e-40 170.2 120 64.2
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 1.0e-40 170.2 120 64.2
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 1.0e-40 170.2 119 63.9
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 1.0e-40 170.2 120 64.2
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 1.0e-40 170.2 141 61.7
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 1.3e-40 169.9 120 70.8
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 1.3e-40 169.9 120 64.2
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.7e-40 169.5 104 76.0
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 3.8e-40 168.3 122 69.7
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 3.8e-40 168.3 122 63.1
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 3.8e-40 168.3 128 62.5
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 5.0e-40 167.9 120 65.0
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 5.0e-40 167.9 150 60.0
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 1.1e-39 166.8 120 62.5
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 2.5e-39 165.6 120 61.7
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 2.5e-39 165.6 128 60.9
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 3.2e-39 165.2 127 65.4
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 2.1e-38 162.5 120 61.7
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 3.9e-37 158.3 120 60.0
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 6.7e-37 157.5 130 57.7
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 1.1e-36 156.8 102 71.6
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 9.7e-36 153.7 104 72.1
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 8.2e-35 150.6 116 60.3
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 5.3e-34 147.9 113 64.6
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 3.4e-33 145.2 130 60.0
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 7.9e-30 134.0 79 79.7
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.7e-27 126.3 80 77.5
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.8e-26 122.9 80 75.0
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 4.1e-26 121.7 130 49.2
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 7.0e-26 120.9 115 50.4
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 7.2e-23 110.9 111 48.6
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 4.7e-22 108.2 59 86.4
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 6.1e-22 107.8 78 67.9
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 2.6e-20 102.4 112 50.0
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 2.4e-18 95.9 79 62.0
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 2.3e-13 79.3 104 42.3
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 8.3e-11 70.9 85 45.9
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.4e-10 70.1 51 66.7
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 2.0e-09 66.2 101 42.6


User provided reference genes

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