Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043617 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.0e-50 203.0 96 100.0
CSS0021153 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 7.3e-28 127.1 65 84.6
CSS0023258 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.8e-26 122.5 58 93.1
AL3G15280 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 5.4e-15 84.3 78 52.6
Sabra13G0032600 Salix brachista HOM05D008295 ORTHO05D010471 2.1e-14 82.4 81 49.4
TWI56G0380 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 2.1e-14 82.4 58 58.6
AT3G04945 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 2.7e-14 82.0 78 52.6
Manes.09G157700 Manihot esculenta HOM05D008295 ORTHO05D010471 7.8e-14 80.5 79 46.8
QL04p009826 Quercus lobata HOM05D008295 ORTHO05D010471 1.7e-13 79.3 56 53.6
Potri.013G032700 Populus trichocarpa HOM05D008295 ORTHO05D010471 2.3e-13 79.0 58 55.2
QL04p009829 Quercus lobata HOM05D008295 ORTHO05D010471 5.1e-13 77.8 64 50.0
Duzib106G0032 Durio zibethinus HOM05D008295 ORTHO05D010471 1.1e-12 76.6 76 48.7
Eucgr.H04400 Eucalyptus grandis HOM05D008295 ORTHO05D010471 4.3e-12 74.7 58 53.4
PGR004G0687 Punica granatum HOM05D008295 ORTHO05D010471 4.3e-12 74.7 58 53.4
C02p26540 Brassica napus HOM05D008295 ORTHO05D010471 5.6e-12 74.3 82 47.6
A02p15960 Brassica napus HOM05D008295 ORTHO05D010471 9.6e-12 73.6 82 47.6
C05p62320 Brassica napus HOM05D008295 ORTHO05D010471 9.6e-12 73.6 82 46.3
BcaC03g15093 Brassica carinata HOM05D008295 ORTHO05D010471 1.2e-11 73.2 82 46.3
BcaC05g29971 Brassica carinata HOM05D008295 ORTHO05D010471 1.2e-11 73.2 82 46.3
A05p42650 Brassica napus HOM05D008295 ORTHO05D010471 1.2e-11 73.2 82 46.3
BraA05t22988Z Brassica rapa HOM05D008295 ORTHO05D010471 1.2e-11 73.2 82 46.3
BolC2t08725H Brassica oleracea HOM05D008295 ORTHO05D010471 1.6e-11 72.8 82 46.3
BcaC05g29925 Brassica carinata HOM05D008295 ORTHO05D010471 2.1e-11 72.4 82 47.6
BolC5t34892H Brassica oleracea HOM05D008295 ORTHO05D010471 2.1e-11 72.4 82 47.6
CiPaw.07G008800 Carya illinoinensis HOM05D008295 ORTHO05D010471 2.1e-11 72.4 60 48.3
C05p62360 Brassica napus HOM05D008295 ORTHO05D010471 3.6e-11 71.6 82 46.3
C05p62380 Brassica napus HOM05D008295 ORTHO05D010471 3.6e-11 71.6 82 46.3
BolC5t34888H Brassica oleracea HOM05D008295 ORTHO05D010471 3.6e-11 71.6 82 45.1
BcaC05g29923 Brassica carinata HOM05D008295 ORTHO05D010471 4.7e-11 71.2 82 45.1
A05p42640 Brassica napus HOM05D008295 ORTHO05D010471 4.7e-11 71.2 82 45.1
BraA05t22987Z Brassica rapa HOM05D008295 ORTHO05D010471 4.7e-11 71.2 82 45.1
BraA05t22989Z Brassica rapa HOM05D008295 ORTHO05D010471 4.7e-11 71.2 82 45.1
BcaB05g24460 Brassica carinata HOM05D008295 ORTHO05D010471 1.1e-10 70.1 82 43.9
Thhalv10022226m.g Eutrema salsugineum HOM05D008295 ORTHO05D010471 1.1e-10 70.1 82 46.3
BraA02t06655Z Brassica rapa HOM05D008295 ORTHO05D010471 1.8e-10 69.3 82 45.1
CiPaw.08G178100 Carya illinoinensis HOM05D008295 ORTHO05D010471 1.8e-10 69.3 61 49.2
Sed0007183 Sechium edule HOM05D008295 ORTHO05D010471 2.4e-10 68.9 50 54.0
BcaC01g04340 Brassica carinata HOM05D008295 ORTHO05D010471 6.8e-10 67.4 77 51.9
C03p41320 Brassica napus HOM05D008295 ORTHO05D010471 6.8e-10 67.4 77 51.9
BolC3t16414H Brassica oleracea HOM05D008295 ORTHO05D010471 6.8e-10 67.4 77 51.9
A03p33940 Brassica napus HOM05D008295 ORTHO05D010471 8.9e-10 67.0 82 48.8
BraA03t12569Z Brassica rapa HOM05D008295 ORTHO05D010471 8.9e-10 67.0 82 48.8
CARHR079250 Cardamine hirsuta HOM05D008295 ORTHO05D010471 1.5e-09 66.2 60 45.0
BolC3t16413H Brassica oleracea HOM05D008295 ORTHO05D010471 5.8e-09 64.3 83 47.0
BcaC01g04341 Brassica carinata HOM05D008295 ORTHO05D010471 7.6e-09 63.9 77 49.4
A03p33930 Brassica napus HOM05D008295 ORTHO05D010471 7.6e-09 63.9 83 47.0
C03p41310 Brassica napus HOM05D008295 ORTHO05D010471 7.6e-09 63.9 87 46.0
BraA03t12568Z Brassica rapa HOM05D008295 ORTHO05D010471 7.6e-09 63.9 83 47.0
BcaB04g19287 Brassica carinata HOM05D008295 ORTHO05D010471 2.9e-08 62.0 76 42.1
AL3G37770 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 4.2e-07 58.2 80 41.2
BolC5t34889H Brassica oleracea HOM05D008295 ORTHO05D010471 4.2e-07 58.2 50 44.0
C05p62350 Brassica napus HOM05D008295 ORTHO05D010471 5.4e-07 57.8 78 38.5
TWI12G0056 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 7.1e-07 57.4 58 36.2


User provided reference genes

Program Settings