Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043606 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 1.6e-61 239.2 119 100.0
CSS0032551 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 4.0e-52 208.0 107 94.4
CSS0033374 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 1.2e-51 206.5 107 93.5
CSS0011431 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 1.5e-51 206.1 107 94.4
CSS0043730 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 1.5e-51 206.1 107 94.4
CSS0046295 Camellia sinensis var. sinensis HOM05D019684 ORTHO05D007567 6.4e-50 200.7 107 94.4
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 6.9e-12 74.3 83 49.4
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 2.9e-10 68.9 63 60.3
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.4e-09 66.6 77 48.1
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 2.5e-09 65.9 68 51.5
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 5.5e-09 64.7 63 55.6
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 1.0e-07 60.5 71 45.1
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 5.1e-07 58.2 56 55.4
Gohir.A01G126300 Gossypium hirsutum HOM05D001049 ORTHO05D001986 2.0e-06 56.2 36 75.0
Gohir.D01G113900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 2.6e-06 55.8 36 75.0
Gorai.002G138900 Gossypium raimondii HOM05D001049 ORTHO05D001986 2.6e-06 55.8 36 75.0
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 3.3e-06 55.5 64 42.2
Hma1.2p1_0125F.1_g058820 Hydrangea macrophylla HOM05D001049 ORTHO05D001986 4.4e-06 55.1 36 72.2
Dinv42608 Davidia involucrata HOM05D001049 ORTHO05D001986 5.7e-06 54.7 31 80.6
Glyma.06G097200 Glycine max HOM05D001049 ORTHO05D001986 5.7e-06 54.7 40 72.5
Gohir.A05G219300 Gossypium hirsutum HOM05D001049 ORTHO05D001986 5.7e-06 54.7 36 72.2
Gohir.D05G221900 Gossypium hirsutum HOM05D001049 ORTHO05D001986 5.7e-06 54.7 36 72.2
Gorai.009G229300 Gossypium raimondii HOM05D001049 ORTHO05D001986 5.7e-06 54.7 36 72.2
MD08G1199100 Malus domestica HOM05D001049 ORTHO05D001986 5.7e-06 54.7 36 72.2
MD15G1386100 Malus domestica HOM05D001049 ORTHO05D001986 5.7e-06 54.7 36 72.2
Thecc.08G071500 Theobroma cacao HOM05D001049 ORTHO05D001986 5.7e-06 54.7 36 72.2
Manes.18G058200 Manihot esculenta HOM05D001049 ORTHO05D001986 7.4e-06 54.3 36 72.2
Psat5g046800 Pisum sativum HOM05D001049 ORTHO05D001986 7.4e-06 54.3 36 75.0
Prupe.1G532800 Prunus persica HOM05D001049 ORTHO05D001986 7.4e-06 54.3 36 72.2
PGR042G3763 Punica granatum HOM05D001049 ORTHO05D001986 7.4e-06 54.3 36 72.2
THA.LOC104806881 Tarenaya hassleriana HOM05D001049 ORTHO05D001986 7.4e-06 54.3 38 68.4
arahy.Tifrunner.gnm1.ann1.BQAG9X Arachis hypogaea HOM05D001049 ORTHO05D001986 9.7e-06 53.9 31 80.6
arahy.Tifrunner.gnm1.ann1.Q0I0E2 Arachis hypogaea HOM05D001049 ORTHO05D001986 9.7e-06 53.9 31 80.6
CARHR231910 Cardamine hirsuta HOM05D001049 ORTHO05D001986 9.7e-06 53.9 36 72.2
CARHR231920 Cardamine hirsuta HOM05D001049 ORTHO05D001986 9.7e-06 53.9 36 72.2
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 9.7e-06 53.9 59 49.2


User provided reference genes

Program Settings