Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.1e-111 406.8 212 100.0
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 5.6e-97 357.8 212 90.6
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 5.8e-86 321.2 213 80.8
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 2.9e-85 318.9 217 79.7
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 2.9e-85 318.9 213 78.9
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 2.4e-84 315.8 213 80.3
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.4e-84 315.8 232 73.3
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 1.3e-82 310.1 212 79.7
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 1.3e-82 310.1 212 79.7
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 2.5e-81 305.8 223 73.5
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.3e-80 303.5 217 77.0
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 1.3e-80 303.5 215 78.6
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.8e-80 302.4 216 75.9
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 4.8e-80 301.6 217 75.1
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 4.8e-80 301.6 218 76.1
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.8e-79 299.7 216 75.9
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 2.4e-79 299.3 220 72.7
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 4.0e-79 298.5 212 77.8
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 5.8e-78 294.7 214 73.4
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.7e-77 293.1 214 75.7
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 1.7e-77 293.1 216 74.1
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.9e-77 292.4 214 75.2
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.4e-76 290.0 218 69.7
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 3.2e-76 288.9 216 74.1
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 5.4e-76 288.1 212 73.1
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 2.7e-75 285.8 220 70.5
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 6.0e-75 284.6 234 70.1
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 7.9e-75 284.3 212 71.7
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.3e-74 282.7 212 74.1
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 5.1e-74 281.6 215 70.7
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 1.9e-73 279.6 212 69.8
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 4.3e-73 278.5 213 71.4
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 5.6e-73 278.1 213 71.4
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 7.4e-73 277.7 214 72.4
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.3e-72 276.9 220 70.0
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.6e-72 276.6 228 69.3
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.1e-72 276.2 219 70.8
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 2.1e-72 276.2 217 69.1
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 2.1e-72 276.2 212 70.3
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 2.8e-72 275.8 223 66.8
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 3.7e-72 275.4 216 72.7
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 3.7e-72 275.4 212 70.8
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 4.8e-72 275.0 213 71.4
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 6.2e-72 274.6 214 69.2
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 6.2e-72 274.6 218 70.2
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.1e-71 273.9 150 90.7
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.0e-70 269.6 219 70.8
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.0e-70 269.6 184 76.6
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.6e-70 269.2 154 87.0
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 3.4e-70 268.9 150 89.3
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.5e-70 268.5 187 77.5
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.7e-69 266.5 213 69.5
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 3.8e-69 265.4 214 68.7
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 7.1e-68 261.2 212 67.0
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.6e-67 260.0 218 65.6
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 2.1e-67 259.6 177 73.4
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 3.5e-67 258.8 152 85.5
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 3.5e-67 258.8 205 69.8
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 4.6e-67 258.5 221 65.6
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 6.0e-67 258.1 212 66.5
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 2.3e-66 256.1 150 84.0
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 3.0e-66 255.8 212 69.3
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.1e-65 253.8 223 64.1
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.5e-65 253.4 212 68.4
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.9e-65 253.1 149 81.9
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 3.7e-64 248.8 152 81.6
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.8e-64 248.4 151 84.8
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 4.8e-64 248.4 172 79.7
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 6.2e-64 248.1 220 65.9
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 8.2e-64 247.7 136 89.7
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 1.8e-63 246.5 215 64.2
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 2.4e-63 246.1 212 65.6
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.1e-63 245.7 207 70.0
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 4.1e-63 245.4 212 64.2
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 4.1e-63 245.4 213 64.3
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 9.0e-63 244.2 196 69.9
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.4e-62 242.3 217 66.4
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 7.6e-62 241.1 212 63.2
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 7.6e-62 241.1 149 79.9
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 5.0e-61 238.4 212 62.3
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 3.2e-60 235.7 204 64.7
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 5.5e-60 235.0 197 67.5
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 7.2e-60 234.6 187 67.4
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 7.2e-60 234.6 187 67.4
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.2e-59 233.8 153 76.5
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 2.1e-59 233.0 192 67.7
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 2.7e-59 232.6 153 75.2
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 3.5e-59 232.3 214 60.3
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 7.9e-59 231.1 195 65.6
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 3.0e-58 229.2 224 58.9
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.9e-58 228.8 187 68.4
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.1e-57 227.3 128 85.9
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.9e-57 226.5 187 67.9
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 2.4e-55 219.5 168 63.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 5.3e-55 218.4 232 57.8
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 5.9e-54 214.9 135 76.3
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.9e-52 209.9 152 65.8
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 1.2e-51 207.2 215 54.9
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 1.1e-49 200.7 171 66.7
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 3.7e-48 195.7 109 89.0
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.8e-47 193.4 107 89.7
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 3.4e-46 189.1 155 60.0
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.5e-46 188.7 110 87.3
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.9e-44 183.3 148 69.6
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.4e-42 177.2 159 66.7
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 7.4e-41 171.4 151 66.9
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 1.1e-39 167.5 161 60.9
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 2.4e-39 166.4 147 65.3
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 5.5e-36 155.2 96 77.1
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 3.1e-31 139.4 72 93.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 3.4e-25 119.4 154 40.9
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 3.7e-24 115.9 102 64.7
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 1.1e-23 114.4 68 82.4
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 1.1e-23 114.4 68 82.4
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.2e-17 94.4 58 75.9
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.3e-13 80.1 52 73.1
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 3.2e-07 59.7 38 71.1


User provided reference genes

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