Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043593 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.8e-73 278.5 138 100.0
CSS0016316 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.0e-62 241.1 138 88.4
CSS0027970 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.7e-52 208.0 126 80.2
CSS0023272 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.8e-48 196.1 153 68.0
Hma1.2p1_0619F.1_g190370 Hydrangea macrophylla HOM05D000023 ORTHO05D002258 1.2e-42 176.8 110 79.1
Dinv14651 Davidia involucrata HOM05D019978 ORTHO05D018230 1.7e-41 172.9 115 74.8
Actinidia06841 Actinidia chinensis HOM05D000023 ORTHO05D000014 3.5e-39 165.2 104 77.9
TWI23G0203 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 6.5e-38 161.0 126 58.7
Hma1.2p1_0017F.1_g011150 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.8e-35 152.9 126 57.9
Lsat_1_v5_gn_5_118361 Lactuca sativa HOM05D000023 ORTHO05D000014 3.0e-35 152.1 126 54.8
Hma1.2p1_0153F.1_g067820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.6e-34 149.1 127 54.3
Hma1.2p1_0222F.1_g093680 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.6e-34 149.1 127 55.1
Hma1.2p1_1125F.1_g259630 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-33 146.7 127 52.0
Hma1.2p1_1425F.1_g282820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.7e-33 146.4 126 55.6
Hma1.2p1_0661F.1_g197850 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.4e-32 141.4 111 55.9
Hma1.2p1_0169F.1_g074660 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.7e-31 139.0 115 56.5
HanXRQChr05g0139411 Helianthus annuus HOM05D000023 ORTHO05D000014 1.0e-30 137.1 126 50.8
ECA238G0901 Erigeron canadensis HOM05D000023 ORTHO05D000014 8.6e-30 134.0 126 49.2
Hund22389 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.1e-28 129.4 127 51.2
EL10Ac2g03711 Beta vulgaris HOM05D000023 ORTHO05D000014 2.8e-28 129.0 126 47.6
RcHm_v2.0_Chr7g0223471 Rosa chinensis HOM05D000023 ORTHO05D002258 6.1e-28 127.9 110 50.9
AUR62042194 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.0e-27 127.1 125 47.2
AUR62012060 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.2e-26 123.6 125 46.4
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-22 110.2 125 44.0
Hma1.2p1_0084F.1_g042930 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.7e-22 109.8 92 55.4
Ah.10g026540 Amaranthus hybridus HOM05D057872 ORTHO05D000014 8.6e-22 107.5 108 42.6
COL.COLO4_27211 Corchorus olitorius HOM05D000023 ORTHO05D000014 9.5e-21 104.0 73 63.0
Rhsim02G0002400 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.2e-20 103.6 125 41.6
Rhsim05G0125600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.6e-20 103.2 125 41.6
Ah.07g197140 Amaranthus hybridus HOM05D000023 ORTHO05D000014 6.1e-20 101.3 92 50.0
Ah.02g119120 Amaranthus hybridus HOM05D000023 ORTHO05D002258 1.4e-19 100.1 125 39.2
CSS0029210 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.8e-19 99.8 125 40.0
vmacro01190 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 5.2e-19 98.2 125 40.0
vmacro22609 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 5.2e-19 98.2 125 40.0
vmacro21165 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 7.5e-18 94.4 125 40.0
RhsimUnG0210600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.3e-17 93.6 125 39.2
Hma1.2p1_1264F.1_g271330 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.7e-17 93.2 125 37.6
CSS0003700 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.4e-17 91.3 111 39.6
Rhsim12G0068400 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.4e-17 91.3 125 38.4
Hma1.2p1_0139F.1_g063210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.1e-16 88.6 71 59.2
vmacro21303 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 4.1e-16 88.6 125 38.4
vmacro00523 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 5.4e-16 88.2 108 41.7
vmacro21168 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.0e-15 86.3 105 41.0
RhsimUnG0179600 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.5e-15 85.5 110 39.1
PSO421G0727 Papaver somniferum HOM05D000023 ORTHO05D000014 7.8e-15 84.3 124 37.9
Rhsim04G0118200 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.8e-15 84.3 125 36.8
Hma1.2p1_0400F.1_g144380 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.0e-14 84.0 113 37.2
HPP92_024951 Vanilla planifolia HOM05D000023 ORTHO05D000014 1.7e-14 83.2 111 36.0
AUR62042294 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.3e-14 82.8 73 46.6
Hma1.2p1_0006F.1_g004740 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.3e-14 82.8 111 36.0
Hma1.2p1_0232F.1_g097790 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.3e-14 82.8 118 33.1
Rhsim12G0068300 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.3e-14 82.8 118 36.4
PSO500G0158 Papaver somniferum HOM05D000023 ORTHO05D000014 3.9e-14 82.0 124 37.1
PSO170G2584 Papaver somniferum HOM05D000023 ORTHO05D000014 5.0e-14 81.6 124 37.1
PSO675G3696 Papaver somniferum HOM05D000023 ORTHO05D000014 1.1e-13 80.5 124 37.1
HPP92_026521 Vanilla planifolia HOM05D000023 ORTHO05D000014 1.1e-13 80.5 111 35.1
Hma1.2p1_2537F.1_g324110 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-13 80.1 67 53.7
COL.COLO4_06621 Corchorus olitorius HOM05D023965 ORTHO05D000014 4.3e-13 78.6 73 56.2
Hma1.2p1_0801F.1_g220220 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.6e-12 76.6 67 55.2
RhsimUnG0179400 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.6e-12 76.6 103 36.9
PSO675G4268 Papaver somniferum HOM05D000023 ORTHO05D000014 8.1e-12 74.3 125 36.0
Rhsim01G0022100 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.1e-11 73.9 93 36.6
Rhsim03G0158500 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.6e-10 69.3 97 36.1
RcHm_v2.0_Chr5g0011621 Rosa chinensis HOM05D013926 ORTHO05D020985 1.3e-09 67.0 125 34.4
ECA240G1446 Erigeron canadensis HOM05D001392 ORTHO05D003370 8.3e-09 64.3 84 39.3
EL10Ac1g01552 Beta vulgaris HOM05D000023 ORTHO05D000014 1.9e-08 63.2 126 32.5
vmacro03238 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 4.1e-08 62.0 125 28.0
Actinidia02644 Actinidia chinensis HOM05D000023 ORTHO05D000014 5.4e-08 61.6 46 67.4
Lsat_1_v5_gn_2_11620 Lactuca sativa HOM05D000023 ORTHO05D000014 1.0e-06 57.4 62 41.9
SEGI_02520 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-06 57.0 112 33.9
SEGI_05729 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-06 57.0 112 33.9
SEGI_15840 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.9e-06 55.5 107 31.8
Hma1.2p1_1081F.1_g255100 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.6e-06 54.7 80 42.5
SEGI_28317 Sequoiadendron giganteum HOM05D004541 ORTHO05D006163 6.6e-06 54.7 117 32.5


User provided reference genes

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