Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0032991 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 3.2e-24 115.2 56 100.0
CSS0043579 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 3.2e-24 115.2 56 100.0
Dinv14726 Davidia involucrata HOM05D007247 ORTHO05D009208 1.1e-13 80.1 51 84.3
DCAR_026511 Daucus carota HOM05D007247 ORTHO05D009208 3.6e-12 75.1 57 68.4
QL03p057801 Quercus lobata HOM05D007247 ORTHO05D009208 4.7e-12 74.7 51 76.5
CANSAT01G0364 Cannabis sativa HOM05D007247 ORTHO05D009208 6.2e-12 74.3 49 71.4
Duzib251G0560 Durio zibethinus HOM05D007247 ORTHO05D009208 8.1e-12 73.9 52 76.9
ECA234G3809 Erigeron canadensis HOM05D007247 ORTHO05D009208 1.4e-11 73.2 53 69.8
Oeu001697.1 Olea europaea HOM05D007247 ORTHO05D009208 1.4e-11 73.2 53 73.6
Manes.12G022500 Manihot esculenta HOM05D007247 ORTHO05D009208 2.3e-11 72.4 49 77.6
Thecc.02G261000 Theobroma cacao HOM05D007247 ORTHO05D009208 3.1e-11 72.0 56 69.6
Phvul.003G064700 Phaseolus vulgaris HOM05D007247 ORTHO05D009208 5.2e-11 71.2 45 80.0
VMungo0251G0750 Vigna mungo HOM05D007247 ORTHO05D009208 5.2e-11 71.2 45 80.0
Rhsim12G0040300 Rhododendron simsii HOM05D007247 ORTHO05D009208 6.8e-11 70.9 52 76.9
MSTRG.13349 Avicennia marina HOM05D007247 ORTHO05D009208 8.9e-11 70.5 44 79.5
Sabra10G0021600 Salix brachista HOM05D007247 ORTHO05D009208 8.9e-11 70.5 52 71.2
Lalb_Chr09g0326081 Lupinus albus HOM05D007247 ORTHO05D009208 1.2e-10 70.1 52 63.5
TPR.G38802 Trifolium pratense HOM05D007247 ORTHO05D009208 1.2e-10 70.1 47 76.6
Ciclev10033189m.g Citrus clementina HOM05D007247 ORTHO05D009208 1.5e-10 69.7 57 64.9
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 1.5e-10 69.7 55 72.7
Duzib248G0486 Durio zibethinus HOM05D007247 ORTHO05D009208 1.5e-10 69.7 52 73.1
TAR622G0973 Trochodendron aralioides HOM05D007247 ORTHO05D009208 1.5e-10 69.7 43 81.4
A08p26670 Brassica napus HOM05D007247 ORTHO05D009208 2.6e-10 68.9 49 71.4
C03p73320 Brassica napus HOM05D007247 ORTHO05D009208 2.6e-10 68.9 49 71.4
BraA08t34615Z Brassica rapa HOM05D007247 ORTHO05D009208 2.6e-10 68.9 49 71.4
Cfa009218 Carpinus fangiana HOM05D007247 ORTHO05D009208 2.6e-10 68.9 45 75.6
Eucgr.H02494 Eucalyptus grandis HOM05D007247 ORTHO05D009208 2.6e-10 68.9 54 70.4
Sp1g23190 Schrenkiella parvula HOM05D007247 ORTHO05D009208 2.6e-10 68.9 48 72.9
Medtr5g032790 Medicago truncatula HOM05D007247 ORTHO05D009208 3.4e-10 68.6 49 73.5
Potri.008G186200 Populus trichocarpa HOM05D007247 ORTHO05D009208 4.4e-10 68.2 51 70.6
Prupe.1G245600 Prunus persica HOM05D007247 ORTHO05D009208 4.4e-10 68.2 41 82.9
COL.COLO4_04829 Corchorus olitorius HOM05D007247 ORTHO05D009208 5.8e-10 67.8 52 67.3
Psat2g084240 Pisum sativum HOM05D007247 ORTHO05D009208 5.8e-10 67.8 54 70.4
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 5.8e-10 67.8 44 77.3
BcaB03g12051 Brassica carinata HOM05D007247 ORTHO05D009208 9.9e-10 67.0 48 70.8
Glyma.18G144900 Glycine max HOM05D007247 ORTHO05D009208 9.9e-10 67.0 55 67.3
Hma1.2p1_0079F.1_g041000 Hydrangea macrophylla HOM05D007247 ORTHO05D009208 9.9e-10 67.0 52 73.1
Lj6E813T0 Lonicera japonica HOM05D007247 ORTHO05D009208 9.9e-10 67.0 43 74.4
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 1.3e-09 66.6 50 68.0
Haze_12254 Corylus avellana HOM05D007247 ORTHO05D009208 1.3e-09 66.6 45 73.3
Glyma.08G281800 Glycine max HOM05D007247 ORTHO05D009208 1.3e-09 66.6 51 70.6
HanXRQChr12g0385811 Helianthus annuus HOM05D007247 ORTHO05D009208 1.3e-09 66.6 54 61.1
Peaxi162Scf00128g00216 Petunia axillaris HOM05D007247 ORTHO05D009208 1.3e-09 66.6 48 70.8
CiPaw.05G181400 Carya illinoinensis HOM05D007247 ORTHO05D009208 1.7e-09 66.2 51 66.7
Actinidia15099 Actinidia chinensis HOM05D000233 ORTHO05D000020 2.2e-09 65.9 53 71.7
BcaC01g01656 Brassica carinata HOM05D007247 ORTHO05D009208 2.2e-09 65.9 49 69.4
BolC3t19629H Brassica oleracea HOM05D007247 ORTHO05D009208 2.2e-09 65.9 49 69.4
Cfa009217 Carpinus fangiana HOM05D007247 ORTHO05D009208 2.2e-09 65.9 43 74.4
AUR62024275 Chenopodium quinoa HOM05D007247 ORTHO05D009208 2.2e-09 65.9 54 63.0
Lj4g0020020 Lotus japonicus HOM05D007247 ORTHO05D009208 2.2e-09 65.9 55 67.3
Psat4g115600 Pisum sativum HOM05D007247 ORTHO05D009208 2.2e-09 65.9 51 68.6
Thhalv10009220m.g Eutrema salsugineum HOM05D007247 ORTHO05D009208 2.9e-09 65.5 48 68.8
Potri.010G046700 Populus trichocarpa HOM05D007247 ORTHO05D009208 2.9e-09 65.5 40 77.5
Aqoxy5G03750 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 3.8e-09 65.1 43 74.4
Ca_22588_v3 Cicer arietinum L. HOM05D007247 ORTHO05D009208 3.8e-09 65.1 50 68.0
Gohir.A03G134800 Gossypium hirsutum HOM05D007247 ORTHO05D009208 3.8e-09 65.1 52 67.3
Gohir.D02G158400 Gossypium hirsutum HOM05D007247 ORTHO05D009208 3.8e-09 65.1 52 67.3
Gorai.005G177800 Gossypium raimondii HOM05D007247 ORTHO05D009208 3.8e-09 65.1 52 67.3
Actinidia01350 Actinidia chinensis HOM05D000233 ORTHO05D000020 4.9e-09 64.7 43 79.1
Manes.13G023600 Manihot esculenta HOM05D007247 ORTHO05D009208 4.9e-09 64.7 43 72.1
Oeu057538.1 Olea europaea HOM05D007247 ORTHO05D009208 4.9e-09 64.7 53 67.9
Solyc05g013560.3 Solanum lycopersicum HOM05D007247 ORTHO05D009208 4.9e-09 64.7 61 57.4
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 6.4e-09 64.3 51 68.6
Lsat_1_v5_gn_4_4161 Lactuca sativa HOM05D007247 ORTHO05D009208 6.4e-09 64.3 45 73.3
Sopen05g008460 Solanum pennellii HOM05D007247 ORTHO05D009208 6.4e-09 64.3 61 55.7
Migut.E00205 Erythranthe guttata HOM05D000233 ORTHO05D000020 8.4e-09 63.9 45 66.7
AL1G40330 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 1.1e-08 63.5 43 69.8
EL10Ac6g13820 Beta vulgaris HOM05D007247 ORTHO05D009208 1.1e-08 63.5 35 82.9
Actinidia08135 Actinidia chinensis HOM05D007247 ORTHO05D009208 1.4e-08 63.2 43 76.7
MD13G1100900 Malus domestica HOM05D007247 ORTHO05D009208 1.4e-08 63.2 41 75.6
AUR62005467 Chenopodium quinoa HOM05D007247 ORTHO05D009208 1.9e-08 62.8 54 59.3
Nn4g22599 Nelumbo nucifera HOM05D007247 ORTHO05D009208 1.9e-08 62.8 51 62.7
SalBow8G0600 Salvia bowleyana HOM05D007247 ORTHO05D009208 1.9e-08 62.8 54 57.4
CARHR026490 Cardamine hirsuta HOM05D007247 ORTHO05D009208 2.4e-08 62.4 43 69.8
AL2G26710 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 3.2e-08 62.0 49 69.4
Carub.0001s2551 Capsella rubella HOM05D007247 ORTHO05D009208 4.1e-08 61.6 43 67.4
MD16G1101300 Malus domestica HOM05D007247 ORTHO05D009208 4.1e-08 61.6 40 75.0
TAR636G3342 Trochodendron aralioides HOM05D007247 ORTHO05D009208 4.1e-08 61.6 42 69.0
Aa31sc790G10 Aethionema arabicum HOM05D007247 ORTHO05D009208 9.2e-08 60.5 43 72.1
ATR0824G192 Amborella trichopoda HOM05D007247 ORTHO05D009208 9.2e-08 60.5 49 71.4
AT1G24577 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 9.2e-08 60.5 56 57.1
AT1G67910 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 9.2e-08 60.5 49 67.3
Medtr8g069350 Medicago truncatula HOM05D007247 ORTHO05D009208 1.2e-07 60.1 41 70.7
THA.LOC104825564 Tarenaya hassleriana HOM05D007247 ORTHO05D009208 1.2e-07 60.1 50 64.0
unitig_8.g3935 Utricularia gibba HOM05D007247 ORTHO05D009208 1.6e-07 59.7 44 68.2
BcaB03g15384 Brassica carinata HOM05D007247 ORTHO05D009208 2.1e-07 59.3 44 65.9
BcaC08g46018 Brassica carinata HOM05D007247 ORTHO05D009208 2.1e-07 59.3 44 65.9
A07p32290 Brassica napus HOM05D007247 ORTHO05D009208 2.1e-07 59.3 44 65.9
C06p38130 Brassica napus HOM05D007247 ORTHO05D009208 2.1e-07 59.3 44 65.9
BolC6t38910H Brassica oleracea HOM05D007247 ORTHO05D009208 2.1e-07 59.3 44 65.9
BraA07t30854Z Brassica rapa HOM05D007247 ORTHO05D009208 2.1e-07 59.3 44 65.9
HanXRQChr17g0569581 Helianthus annuus HOM05D007247 ORTHO05D009208 2.7e-07 58.9 45 66.7
Carub.0002s1440 Capsella rubella HOM05D007247 ORTHO05D009208 3.5e-07 58.5 51 64.7
TAR636G3092 Trochodendron aralioides HOM05D007247 ORTHO05D009208 3.5e-07 58.5 42 64.3
DCAR_024425 Daucus carota HOM05D000669 ORTHO05D000679 7.8e-07 57.4 42 66.7
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 1.0e-06 57.0 29 82.8
Sc04g0009510 Simmondsia chinensis HOM05D007247 ORTHO05D009208 1.0e-06 57.0 45 66.7
RcHm_v2.0_Chr4g0433081 Rosa chinensis HOM05D007247 ORTHO05D009208 2.3e-06 55.8 53 50.9
TPR.G17749 Trifolium pratense HOM05D007247 ORTHO05D009208 3.0e-06 55.5 52 63.5
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 5.1e-06 54.7 49 53.1
TAR629G1528 Trochodendron aralioides HOM05D007247 ORTHO05D009208 8.6e-06 53.9 43 67.4


User provided reference genes

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