Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 9.3e-141 503.4 238 100.0
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 1.9e-122 442.6 233 88.4
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 6.9e-120 434.1 241 85.9
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 7.1e-117 424.1 239 82.8
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 5.1e-115 417.9 234 81.6
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 3.1e-112 408.7 229 81.2
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 5.3e-112 407.9 231 79.7
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 1.2e-111 406.8 238 80.7
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 2.0e-111 406.0 235 80.0
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 3.4e-111 405.2 224 82.6
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 3.4e-111 405.2 235 79.1
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 1.7e-110 402.9 239 78.7
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 3.8e-110 401.7 226 79.2
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 3.8e-110 401.7 235 78.3
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 3.8e-110 401.7 235 78.3
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 1.4e-109 399.8 236 79.2
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 1.9e-109 399.4 236 78.8
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 1.9e-109 399.4 236 77.1
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 2.5e-109 399.1 222 80.6
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 1.2e-108 396.7 239 77.0
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 1.6e-108 396.4 235 77.0
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.7e-108 395.6 235 77.0
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 6.1e-108 394.4 236 76.7
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 7.9e-108 394.0 234 76.9
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 7.9e-108 394.0 227 78.0
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 1.4e-107 393.3 227 79.7
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 3.0e-107 392.1 231 77.5
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 3.9e-107 391.7 233 80.3
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.1e-107 391.3 236 75.8
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 8.8e-107 390.6 211 83.9
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 8.8e-107 390.6 227 78.4
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 1.1e-106 390.2 231 77.1
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 1.1e-106 390.2 238 74.8
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 4.3e-106 388.3 229 76.9
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 7.4e-106 387.5 238 77.3
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 1.4e-104 383.3 226 75.2
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 1.8e-104 382.9 236 73.7
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 6.9e-104 380.9 239 73.2
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 2.6e-103 379.0 231 75.8
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 5.9e-103 377.9 224 77.7
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 5.9e-103 377.9 226 74.8
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 1.4e-101 373.2 238 71.0
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 5.5e-101 371.3 224 74.6
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.6e-100 369.8 237 73.8
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 2.1e-100 369.4 293 62.1
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 2.3e-99 365.9 236 74.2
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 5.1e-99 364.8 226 73.9
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 2.6e-98 362.5 257 65.8
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 9.7e-98 360.5 256 67.6
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 3.7e-97 358.6 240 68.8
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 7.7e-95 350.9 221 71.9
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 1.7e-94 349.7 225 70.2
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 4.4e-90 335.1 222 69.4
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 6.3e-89 331.3 222 67.6
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 2.4e-88 329.3 221 68.8
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 7.0e-88 327.8 235 66.8
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 2.6e-87 325.9 225 63.6
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 1.7e-86 323.2 176 84.1
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 6.5e-86 321.2 205 70.2
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 6.7e-83 311.2 232 66.4
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 2.6e-82 309.3 226 65.5
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 1.4e-80 303.5 236 59.7
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 1.2e-79 300.4 180 78.9
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 2.0e-79 299.7 180 76.7
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 3.5e-79 298.9 224 60.7
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 5.5e-77 291.6 221 59.3
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 9.4e-77 290.8 221 59.7
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 1.2e-76 290.4 233 61.4
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 5.2e-75 285.0 220 60.5
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 7.5e-74 281.2 228 57.5
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 1.7e-73 280.0 235 60.4
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 8.3e-73 277.7 239 54.4
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 4.1e-72 275.4 239 54.0
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 5.0e-70 268.5 221 56.6
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 8.6e-70 267.7 233 57.5
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.1e-68 263.1 156 78.2
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 4.1e-64 248.8 133 85.7
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 1.1e-56 224.2 125 81.6
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.6e-55 220.3 134 73.9
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 7.8e-55 218.0 200 57.0
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 5.6e-53 211.8 134 69.4
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 2.1e-52 209.9 111 85.6
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.5e-45 187.2 133 69.9
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 1.5e-45 187.2 102 83.3
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 1.2e-42 177.6 194 48.5
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 5.4e-40 168.7 132 56.1
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 3.1e-27 126.3 212 39.2
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 2.1e-23 113.6 85 56.5
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 5.1e-22 109.0 72 58.3
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 6.6e-22 108.6 88 64.8
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 9.6e-21 104.8 86 57.0
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 2.1e-20 103.6 79 51.9
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.3e-17 94.4 58 74.1
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 1.4e-08 64.3 51 66.7


User provided reference genes

Program Settings