Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 4.0e-56 221.1 103 100.0
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 3.9e-35 151.4 112 63.4
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.1e-32 143.3 113 63.7
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 3.1e-32 141.7 115 63.5
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 1.5e-31 139.4 111 61.3
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 2.6e-31 138.7 106 62.3
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 3.4e-31 138.3 107 61.7
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 3.4e-31 138.3 108 64.8
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 7.5e-31 137.1 106 65.1
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 7.5e-31 137.1 107 64.5
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 9.9e-31 136.7 110 63.6
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 1.3e-30 136.3 106 64.2
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 6.4e-30 134.0 114 57.9
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 1.1e-29 133.3 107 63.6
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 1.1e-29 133.3 106 61.3
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 1.4e-29 132.9 110 62.7
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 4.1e-29 131.3 108 62.0
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.4e-29 131.0 108 60.2
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.6e-28 129.4 108 60.2
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.6e-28 129.4 108 59.3
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 2.7e-28 128.6 99 64.6
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 2.7e-28 128.6 105 59.0
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 3.5e-28 128.3 98 64.3
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 3.5e-28 128.3 110 60.0
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 4.6e-28 127.9 109 60.6
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 4.6e-28 127.9 110 60.9
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 6.0e-28 127.5 105 64.8
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 6.0e-28 127.5 96 60.4
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.0e-27 126.7 110 60.0
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.0e-27 126.7 112 59.8
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.3e-27 126.3 103 56.3
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 1.7e-27 125.9 117 60.7
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 1.7e-27 125.9 112 60.7
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 1.7e-27 125.9 109 56.9
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.7e-27 125.9 107 60.7
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.7e-27 125.9 110 59.1
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.7e-27 125.9 112 58.0
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 2.3e-27 125.6 112 58.0
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 3.0e-27 125.2 112 59.8
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.0e-27 125.2 112 59.8
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.0e-27 125.2 112 59.8
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 3.9e-27 124.8 96 59.4
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 5.1e-27 124.4 107 59.8
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 5.1e-27 124.4 107 59.8
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 6.6e-27 124.0 59 86.4
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 6.6e-27 124.0 96 59.4
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.5e-26 122.9 112 56.2
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 1.5e-26 122.9 60 83.3
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 3.3e-26 121.7 108 59.3
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 3.3e-26 121.7 113 58.4
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 4.3e-26 121.3 112 58.9
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 4.3e-26 121.3 113 50.4
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 5.6e-26 120.9 73 71.2
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 2.1e-25 119.0 114 51.8
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.1e-25 119.0 52 96.2
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 2.8e-25 118.6 59 81.4
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 4.7e-25 117.9 96 62.5
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 6.2e-25 117.5 58 81.0
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 1.1e-24 116.7 102 59.8
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 1.1e-24 116.7 108 57.4
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 1.4e-24 116.3 74 70.3
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 1.4e-24 116.3 61 78.7
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 1.8e-24 115.9 107 54.2
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 2.4e-24 115.5 111 54.1
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 4.0e-24 114.8 99 58.6
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 5.2e-24 114.4 61 77.0
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 6.8e-24 114.0 104 55.8
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 8.9e-24 113.6 110 54.5
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 1.2e-23 113.2 59 81.4
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 2.0e-23 112.5 99 58.6
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 2.0e-23 112.5 104 55.8
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 4.4e-23 111.3 61 73.8
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 9.9e-23 110.2 49 91.8
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 9.9e-23 110.2 101 56.4
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.3e-22 109.8 103 57.3
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 1.7e-22 109.4 99 53.5
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 1.7e-22 109.4 107 51.4
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 1.7e-22 109.4 103 54.4
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 1.7e-22 109.4 62 71.0
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 2.2e-22 109.0 53 84.9
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 2.2e-22 109.0 53 84.9
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 2.2e-22 109.0 53 84.9
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 2.2e-22 109.0 55 85.5
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 2.9e-22 108.6 51 88.2
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 2.9e-22 108.6 51 88.2
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 2.9e-22 108.6 51 88.2
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 2.9e-22 108.6 51 88.2
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 2.9e-22 108.6 51 88.2
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 2.9e-22 108.6 99 53.5
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 2.9e-22 108.6 51 88.2
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.9e-22 108.6 59 72.9
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 4.9e-22 107.8 96 58.3
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 4.9e-22 107.8 99 56.6
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 4.9e-22 107.8 62 71.0
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 4.9e-22 107.8 101 55.4
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 6.4e-22 107.5 107 52.3
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 6.4e-22 107.5 97 58.8
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 1.9e-21 105.9 103 50.5
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 5.4e-21 104.4 118 47.5
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 7.1e-21 104.0 106 46.2
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 7.1e-21 104.0 51 84.3
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 2.7e-20 102.1 104 51.9
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 4.6e-20 101.3 47 85.1
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 6.0e-20 100.9 51 78.4
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 7.8e-20 100.5 56 73.2
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 1.0e-19 100.1 50 82.0
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.3e-19 99.8 64 64.1
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 1.7e-19 99.4 103 52.4
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 2.3e-19 99.0 92 52.2
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 3.0e-19 98.6 51 76.5
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 6.6e-19 97.4 104 51.0
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 2.5e-18 95.5 110 41.8
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 1.8e-16 89.4 46 76.1
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 1.8e-16 89.4 53 67.9
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 9.9e-15 83.6 56 58.9
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 2.2e-14 82.4 49 61.2


User provided reference genes

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