Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043483 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 3.1e-84 315.1 156 100.0
CSS0011922 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 4.3e-78 294.7 156 93.6
CSS0001774 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 5.6e-78 294.3 156 93.6
CSS0027304 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 4.9e-74 281.2 156 89.7
Dinv34208 Davidia involucrata HOM05D000138 ORTHO05D000078 7.7e-27 124.4 159 52.2
Actinidia31185 Actinidia chinensis HOM05D000138 ORTHO05D000078 2.2e-26 122.9 156 48.1
CSS0009996 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 2.2e-26 122.9 151 53.6
Dinv24960 Davidia involucrata HOM05D000138 ORTHO05D000078 2.3e-23 112.8 155 49.7
TAR622G0432 Trochodendron aralioides HOM05D000138 ORTHO05D000078 1.9e-17 93.2 158 41.8
Lj2A232G26 Lonicera japonica HOM05D000138 ORTHO05D000078 6.7e-15 84.7 164 37.8
QL03p065521 Quercus lobata HOM05D000138 ORTHO05D000078 1.5e-14 83.6 116 43.1
COL.COLO4_23044 Corchorus olitorius HOM05D000138 ORTHO05D000078 2.6e-14 82.8 115 47.8
TAR371G0748 Trochodendron aralioides HOM05D000138 ORTHO05D000078 5.7e-14 81.6 135 40.0
Aqoxy3G00749 Aquilegia oxysepala HOM05D000138 ORTHO05D000078 1.7e-13 80.1 152 36.8
Eucgr.I01921 Eucalyptus grandis HOM05D000138 ORTHO05D000078 2.2e-13 79.7 122 42.6
Duzib251G0203 Durio zibethinus HOM05D000138 ORTHO05D000078 3.7e-13 79.0 134 41.8
Manes.05G097400 Manihot esculenta HOM05D000138 ORTHO05D000078 3.7e-13 79.0 119 42.0
Thecc.02G354400 Theobroma cacao HOM05D000138 ORTHO05D000078 6.3e-13 78.2 132 40.9
CiPaw.03G029500 Carya illinoinensis HOM05D000138 ORTHO05D000078 4.1e-12 75.5 91 42.9
Dinv33722 Davidia involucrata HOM05D000138 ORTHO05D000078 7.0e-12 74.7 116 43.1
Potri.017G078600 Populus trichocarpa HOM05D000138 ORTHO05D000078 7.0e-12 74.7 97 46.4
Manes.01G189600 Manihot esculenta HOM05D000138 ORTHO05D000078 1.2e-11 73.9 122 41.0
Oeu060922.1 Olea europaea HOM05D000138 ORTHO05D000078 2.6e-11 72.8 84 50.0
Prupe.1G268800 Prunus persica HOM05D000138 ORTHO05D000078 2.6e-11 72.8 106 42.5
Thecc.04G075600 Theobroma cacao HOM05D000138 ORTHO05D000078 4.5e-11 72.0 99 46.5
Duzib147G1207 Durio zibethinus HOM05D000138 ORTHO05D000078 5.9e-11 71.6 106 42.5
QL02p080721 Quercus lobata HOM05D000138 ORTHO05D000078 7.7e-11 71.2 91 45.1
Lsat_1_v5_gn_6_3561 Lactuca sativa HOM05D000138 ORTHO05D000078 1.0e-10 70.9 116 37.9
COL.COLO4_25164 Corchorus olitorius HOM05D000138 ORTHO05D000078 1.3e-10 70.5 126 41.3
PSO832G1762 Papaver somniferum HOM05D000138 ORTHO05D000078 1.3e-10 70.5 120 39.2
Duzib248G1318 Durio zibethinus HOM05D000138 ORTHO05D000078 2.9e-10 69.3 128 39.8
Potri.010G092800 Populus trichocarpa HOM05D000138 ORTHO05D000078 2.9e-10 69.3 116 42.2
TWI18G0638 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 2.9e-10 69.3 110 42.7
Manes.15G176860 Manihot esculenta HOM05D000138 ORTHO05D000078 5.0e-10 68.6 95 41.1
PSO591G0071 Papaver somniferum HOM05D000138 ORTHO05D000078 6.5e-10 68.2 119 37.8
MD13G1078300 Malus domestica HOM05D000138 ORTHO05D000078 1.5e-09 67.0 105 41.0
Ca_22863_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 1.9e-09 66.6 131 35.9
Peaxi162Scf00185g00827 Petunia axillaris HOM05D000138 ORTHO05D000078 2.5e-09 66.2 131 38.9
Prupe.3G271200 Prunus persica HOM05D000138 ORTHO05D000078 2.5e-09 66.2 122 39.3
CANSAT64G2477 Cannabis sativa HOM05D000138 ORTHO05D000078 3.2e-09 65.9 100 40.0
MD09G1047800 Malus domestica HOM05D000138 ORTHO05D000078 3.2e-09 65.9 88 45.5
Prupe.3G271400 Prunus persica HOM05D000138 ORTHO05D000078 3.2e-09 65.9 109 41.3
Lj8A308T13 Lonicera japonica HOM05D000138 ORTHO05D000078 4.2e-09 65.5 140 36.4
MBI04_g10408_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000078 4.2e-09 65.5 121 38.0
PGR142G2176 Punica granatum HOM05D000138 ORTHO05D000078 4.2e-09 65.5 111 38.7
VMungo0251G0515 Vigna mungo HOM05D000138 ORTHO05D000078 4.2e-09 65.5 105 40.0
TPR.G4298 Trifolium pratense HOM05D000138 ORTHO05D000078 9.4e-09 64.3 84 44.0
Cfa007516 Carpinus fangiana HOM05D000138 ORTHO05D000078 1.2e-08 63.9 120 34.2
Glyma.08G297000 Glycine max HOM05D000138 ORTHO05D000078 1.2e-08 63.9 105 41.0
Glyma.18G125200 Glycine max HOM05D000138 ORTHO05D000078 1.2e-08 63.9 105 42.9
MD09G1047600 Malus domestica HOM05D000138 ORTHO05D000078 1.2e-08 63.9 116 39.7
Nitab4.5_0001632g0020 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.2e-08 63.9 154 35.1
Ciclev10013824m.g Citrus clementina HOM05D000138 ORTHO05D000078 1.6e-08 63.5 130 37.7
MD17G1047900 Malus domestica HOM05D000138 ORTHO05D000078 1.6e-08 63.5 92 43.5
Dinv06518 Davidia involucrata HOM05D000138 ORTHO05D000078 2.1e-08 63.2 87 46.0
FAN02G4358 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.1e-08 63.2 112 40.2
Lj1g0028067 Lotus japonicus HOM05D000138 ORTHO05D000078 2.1e-08 63.2 138 33.3
Nitab4.5_0000109g0070 Nicotiana tabacum HOM05D000138 ORTHO05D000078 2.7e-08 62.8 155 36.1
TWI36G1621 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 2.7e-08 62.8 134 37.3
arahy.Tifrunner.gnm1.ann1.RC4286 Arachis hypogaea HOM05D000138 ORTHO05D000078 3.6e-08 62.4 135 36.3
CSS0050214 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 3.6e-08 62.4 125 36.8
HanXRQChr13g0396481 Helianthus annuus HOM05D000138 ORTHO05D000078 3.6e-08 62.4 146 33.6
Lj2g0011678 Lotus japonicus HOM05D000138 ORTHO05D000078 3.6e-08 62.4 80 45.0
ECA238G2779 Erigeron canadensis HOM05D000138 ORTHO05D000078 4.7e-08 62.0 85 45.9
FAN09G4387 Fragaria x ananassa HOM05D000138 ORTHO05D000078 4.7e-08 62.0 112 40.2
Peaxi162Scf00456g00017 Petunia axillaris HOM05D000138 ORTHO05D000078 4.7e-08 62.0 151 35.1
Actinidia02699 Actinidia chinensis HOM05D000138 ORTHO05D000078 8.0e-08 61.2 76 48.7
ECA233G2246 Erigeron canadensis HOM05D000138 ORTHO05D000078 8.0e-08 61.2 130 35.4
Oeu017068.1 Olea europaea HOM05D000138 ORTHO05D000078 8.0e-08 61.2 84 45.2
TWI60G0337 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 8.0e-08 61.2 131 39.7
MBI12_g12389_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000078 1.0e-07 60.8 148 35.1
arahy.Tifrunner.gnm1.ann1.5MV2CV Arachis hypogaea HOM05D000138 ORTHO05D000078 1.4e-07 60.5 81 45.7
arahy.Tifrunner.gnm1.ann1.F0M2KT Arachis hypogaea HOM05D000138 ORTHO05D000078 1.4e-07 60.5 81 45.7
Haze_12056 Corylus avellana HOM05D000138 ORTHO05D000078 1.4e-07 60.5 154 34.4
Phvul.003G069000 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 1.4e-07 60.5 105 38.1
FAN05G4836 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.8e-07 60.1 112 39.3
Haze_14578 Corylus avellana HOM05D000138 ORTHO05D000078 2.3e-07 59.7 72 44.4
Hma1.2p1_0449F.1_g155080 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 2.3e-07 59.7 132 34.1
Cc08_g03310 Coffea canephora HOM05D000138 ORTHO05D000078 3.0e-07 59.3 83 47.0
Eucgr.J02131 Eucalyptus grandis HOM05D000138 ORTHO05D000078 3.0e-07 59.3 81 44.4
Aqoxy3G03282 Aquilegia oxysepala HOM05D000138 ORTHO05D000078 4.0e-07 58.9 114 39.5
CiPaw.05G139200 Carya illinoinensis HOM05D000138 ORTHO05D000078 4.0e-07 58.9 105 38.1
FvH4_6g49200 Fragaria vesca HOM05D000138 ORTHO05D000078 4.0e-07 58.9 112 38.4
FAN14G1221 Fragaria x ananassa HOM05D000138 ORTHO05D000078 4.0e-07 58.9 112 38.4
Solyc06g066390.3 Solanum lycopersicum HOM05D000138 ORTHO05D000078 5.2e-07 58.5 134 36.6
Sopen06g021600 Solanum pennellii HOM05D000138 ORTHO05D000078 5.2e-07 58.5 134 36.6
Ca_04103_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 6.7e-07 58.2 69 42.0
Ca_04269_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 6.7e-07 58.2 83 39.8
CANSAT64G1054 Cannabis sativa HOM05D000138 ORTHO05D000078 1.2e-06 57.4 123 34.1
Gohir.D12G169900 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.2e-06 57.4 102 42.2
Medtr6g011490 Medicago truncatula HOM05D000138 ORTHO05D000078 1.2e-06 57.4 82 39.0
RcHm_v2.0_Chr2g0169071 Rosa chinensis HOM05D000138 ORTHO05D000078 1.2e-06 57.4 131 37.4
CAN.G474.17 Capsicum annuum HOM05D000138 ORTHO05D000078 1.5e-06 57.0 155 32.9
Gohir.A07G215600 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.5e-06 57.0 93 41.9
Gorai.001G256900 Gossypium raimondii HOM05D000138 ORTHO05D000078 1.5e-06 57.0 93 41.9
Lsat_1_v5_gn_2_88660 Lactuca sativa HOM05D000138 ORTHO05D000078 1.5e-06 57.0 106 37.7
Psat4g129600 Pisum sativum HOM05D000138 ORTHO05D000078 2.0e-06 56.6 111 36.9
Gohir.A09G021900 Gossypium hirsutum HOM05D000138 ORTHO05D000078 2.6e-06 56.2 107 41.1
Gorai.006G025100 Gossypium raimondii HOM05D000138 ORTHO05D000078 2.6e-06 56.2 107 40.2
Lju41A25T62 Lonicera japonica HOM05D000138 ORTHO05D000078 2.6e-06 56.2 88 39.8
PGSC0003DMG402016771 Solanum tuberosum HOM05D000138 ORTHO05D000078 2.6e-06 56.2 109 38.5
VMungo1383G0316 Vigna mungo HOM05D000138 ORTHO05D000078 2.6e-06 56.2 71 45.1
Gorai.008G182500 Gossypium raimondii HOM05D000138 ORTHO05D000078 3.3e-06 55.8 100 42.0
Medtr8g468920 Medicago truncatula HOM05D000138 ORTHO05D000078 4.4e-06 55.5 113 38.1
Phvul.008G043500 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 4.4e-06 55.5 72 43.1
RcHm_v2.0_Chr4g0440541 Rosa chinensis HOM05D000138 ORTHO05D000078 4.4e-06 55.5 123 35.8
arahy.Tifrunner.gnm1.ann1.I3YYWX Arachis hypogaea HOM05D000138 ORTHO05D000078 9.7e-06 54.3 88 38.6
Gohir.D07G222600 Gossypium hirsutum HOM05D000138 ORTHO05D000078 9.7e-06 54.3 93 40.9


User provided reference genes

Program Settings