Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043461 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 7.7e-127 457.2 240 100.0
CSS0035896 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 4.9e-73 278.5 218 72.9
CSS0043842 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 1.6e-71 273.5 218 72.0
CSS0029569 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 3.5e-71 272.3 218 72.0
Hma1.2p1_0744F.1_g211701 Hydrangea macrophylla HOM05D003462 ORTHO05D003946 2.9e-65 252.7 218 66.1
CSS0043104 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 6.4e-65 251.5 218 67.9
Ciclev10019214m.g Citrus clementina HOM05D003462 ORTHO05D003946 4.1e-64 248.8 218 63.8
Nn4g23600 Nelumbo nucifera HOM05D003462 ORTHO05D003946 7.1e-64 248.1 218 63.8
GSVIVG01008179001 Vitis vinifera HOM05D003462 ORTHO05D003946 1.2e-63 247.3 218 64.7
PGR083G2784 Punica granatum HOM05D003462 ORTHO05D003946 2.7e-63 246.1 218 63.8
TAR371G0026 Trochodendron aralioides HOM05D003462 ORTHO05D003946 2.7e-63 246.1 217 63.6
Actinidia35059 Actinidia chinensis HOM05D003462 ORTHO05D003946 7.8e-63 244.6 218 65.6
Lj5A138T59 Lonicera japonica HOM05D003462 ORTHO05D003946 1.0e-62 244.2 218 62.8
Duzib084G0277 Durio zibethinus HOM05D003462 ORTHO05D003946 1.3e-62 243.8 218 64.2
Manes.01G024300 Manihot esculenta HOM05D003462 ORTHO05D003946 1.3e-62 243.8 218 63.3
Thecc.03G111900 Theobroma cacao HOM05D003462 ORTHO05D003946 1.3e-62 243.8 218 63.3
Gohir.A09G244100 Gossypium hirsutum HOM05D003462 ORTHO05D003946 2.3e-62 243.0 218 63.8
Cpa.g.sc3.203 Carica papaya HOM05D003462 ORTHO05D003946 3.0e-62 242.7 218 64.2
Sed0016449 Sechium edule HOM05D003462 ORTHO05D003946 3.0e-62 242.7 218 62.4
Cc04_g07970 Coffea canephora HOM05D003462 ORTHO05D003946 3.9e-62 242.3 218 61.9
Sabra15G0079500 Salix brachista HOM05D003462 ORTHO05D003946 5.1e-62 241.9 224 61.2
Gohir.D09G245000 Gossypium hirsutum HOM05D003462 ORTHO05D003946 6.6e-62 241.5 218 63.8
Haze_18545 Corylus avellana HOM05D003462 ORTHO05D003946 1.5e-61 240.4 218 61.9
MD14G1217600 Malus domestica HOM05D003462 ORTHO05D003946 1.9e-61 240.0 217 61.3
vmacro16468 Vaccinium macrocarpon HOM05D003462 ORTHO05D003946 2.5e-61 239.6 218 62.8
FvH4_5g13110 Fragaria vesca HOM05D003462 ORTHO05D003946 4.3e-61 238.8 218 61.5
FAN18G1062 Fragaria x ananassa HOM05D003462 ORTHO05D003946 4.3e-61 238.8 218 61.5
CiPaw.15G117200 Carya illinoinensis HOM05D003462 ORTHO05D003946 5.6e-61 238.4 218 61.0
Gorai.006G269300 Gossypium raimondii HOM05D003462 ORTHO05D003946 5.6e-61 238.4 218 62.4
Hund02540 Selenicereus undatus HOM05D003462 ORTHO05D003946 5.6e-61 238.4 218 62.4
ClCG06G015340 Citrullus lanatus HOM05D003462 ORTHO05D003946 7.3e-61 238.0 217 61.8
Potri.015G047500 Populus trichocarpa HOM05D003462 ORTHO05D003946 7.3e-61 238.0 218 63.3
QL10p021514 Quercus lobata HOM05D003462 ORTHO05D003946 9.6e-61 237.7 218 61.5
TWI81G0217 Tripterygium wilfordii HOM05D003462 ORTHO05D003946 9.6e-61 237.7 218 61.5
Lalb_Chr23g0274061 Lupinus albus HOM05D003462 ORTHO05D003946 1.2e-60 237.3 218 63.8
PSO017G3345 Papaver somniferum HOM05D003462 ORTHO05D003946 1.2e-60 237.3 218 60.1
Rhsim12G0146800 Rhododendron simsii HOM05D003462 ORTHO05D003946 1.2e-60 237.3 218 62.8
RcHm_v2.0_Chr7g0184041 Rosa chinensis HOM05D003462 ORTHO05D003946 1.2e-60 237.3 218 61.0
Aqoxy3G00588 Aquilegia oxysepala HOM05D003462 ORTHO05D003946 1.6e-60 236.9 218 61.0
CSS0013858 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 1.6e-60 236.9 219 64.4
Atru.chr9.644 Acer truncatum HOM05D003462 ORTHO05D003946 2.1e-60 236.5 218 61.9
CSS0048759 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 2.1e-60 236.5 219 64.4
Glyma.17G082700 Glycine max HOM05D003462 ORTHO05D003946 6.2e-60 235.0 218 61.9
PSO478G2116 Papaver somniferum HOM05D003462 ORTHO05D003946 1.1e-59 234.2 218 58.7
CSS0028580 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 1.4e-59 233.8 198 70.7
Medtr4g112860 Medicago truncatula HOM05D003462 ORTHO05D003946 1.4e-59 233.8 221 60.6
arahy.Tifrunner.gnm1.ann1.8883SE Arachis hypogaea HOM05D003462 ORTHO05D003946 2.4e-59 233.0 218 61.0
arahy.Tifrunner.gnm1.ann1.HJ4MYC Arachis hypogaea HOM05D003462 ORTHO05D003946 2.4e-59 233.0 218 61.0
Ca_21746_v3 Cicer arietinum L. HOM05D003462 ORTHO05D003946 2.4e-59 233.0 218 60.6
TPR.G2020 Trifolium pratense HOM05D003462 ORTHO05D003946 2.4e-59 233.0 218 61.0
Lj4g0004217 Lotus japonicus HOM05D003462 ORTHO05D003946 3.1e-59 232.6 218 59.6
Phvul.003G181400 Phaseolus vulgaris HOM05D003462 ORTHO05D003946 3.1e-59 232.6 218 61.0
CANSAT80G0024 Cannabis sativa HOM05D003462 ORTHO05D003946 4.0e-59 232.3 218 60.1
MD06G1207100 Malus domestica HOM05D003462 ORTHO05D003946 1.2e-58 230.7 217 59.9
COL.COLO4_28809 Corchorus olitorius HOM05D003462 ORTHO05D003946 1.5e-58 230.3 254 55.1
DCAR_010190 Daucus carota HOM05D003462 ORTHO05D003946 2.0e-58 229.9 218 61.0
Oeu031926.1 Olea europaea HOM05D003462 ORTHO05D003946 2.0e-58 229.9 218 61.5
Peaxi162Scf00017g03131 Petunia axillaris HOM05D003462 ORTHO05D003946 2.0e-58 229.9 218 59.6
Sopen03g033710 Solanum pennellii HOM05D003462 ORTHO05D003946 5.8e-58 228.4 218 61.5
Solyc03g114640.4 Solanum lycopersicum HOM05D003462 ORTHO05D003946 3.8e-57 225.7 218 60.6
Psat1g028640 Pisum sativum HOM05D003462 ORTHO05D003946 4.9e-57 225.3 218 58.7
Sc24g0002690 Simmondsia chinensis HOM05D003462 ORTHO05D003946 6.4e-57 224.9 218 58.7
VMungo1215G0716 Vigna mungo HOM05D003462 ORTHO05D003946 6.4e-57 224.9 218 59.2
Glyma.04G158100 Glycine max HOM05D003462 ORTHO05D003946 8.4e-57 224.6 218 60.6
Lalb_Chr12g0197421 Lupinus albus HOM05D003462 ORTHO05D003946 8.4e-57 224.6 218 57.3
Actinidia01422 Actinidia chinensis HOM05D003462 ORTHO05D003946 1.1e-56 224.2 203 64.0
HanXRQChr05g0157841 Helianthus annuus HOM05D003462 ORTHO05D003946 1.1e-56 224.2 218 58.7
Medtr2g058970 Medicago truncatula HOM05D003462 ORTHO05D003946 2.4e-56 223.0 218 58.7
Phvul.009G204100 Phaseolus vulgaris HOM05D003462 ORTHO05D003946 4.2e-56 222.2 218 58.7
Glyma.06G207100 Glycine max HOM05D003462 ORTHO05D003946 5.4e-56 221.9 218 59.6
MELO3C017261.2 Cucumis melo HOM05D003462 ORTHO05D003946 7.1e-56 221.5 217 58.5
CAN.G982.30 Capsicum annuum HOM05D003462 ORTHO05D003946 2.7e-55 219.5 218 58.7
Eucgr.K02831 Eucalyptus grandis HOM05D003462 ORTHO05D003946 3.5e-55 219.2 218 56.9
AUR62032156 Chenopodium quinoa HOM05D003462 ORTHO05D003946 6.0e-55 218.4 218 58.3
MSTRG.4505 Avicennia marina HOM05D003462 ORTHO05D003946 7.8e-55 218.0 219 58.9
Lsat_1_v5_gn_5_24441 Lactuca sativa HOM05D003462 ORTHO05D003946 1.3e-54 217.2 218 55.5
SalBow1G8183 Salvia bowleyana HOM05D003462 ORTHO05D003946 1.3e-54 217.2 218 56.9
MSTRG.9572 Avicennia marina HOM05D003462 ORTHO05D003946 2.3e-54 216.5 218 57.8
Ca_02712_v3 Cicer arietinum L. HOM05D003462 ORTHO05D003946 3.9e-54 215.7 218 58.7
Duzib205G0774 Durio zibethinus HOM05D003462 ORTHO05D003946 1.1e-53 214.2 206 59.7
EL10Ac5g11203 Beta vulgaris HOM05D003462 ORTHO05D003946 1.9e-53 213.4 218 57.3
Migut.D01481 Erythranthe guttata HOM05D003462 ORTHO05D003946 1.9e-53 213.4 218 56.9
CDE06G1115 Ceratophyllum demersum HOM05D003462 ORTHO05D003946 1.6e-52 210.3 219 56.6
Actinidia18966 Actinidia chinensis HOM05D003462 ORTHO05D003946 2.8e-52 209.5 162 71.6
Aa31LG4G4310 Aethionema arabicum HOM05D003462 ORTHO05D003946 2.4e-51 206.5 218 55.0
AL2G33830 Arabidopsis lyrata HOM05D003462 ORTHO05D003946 2.4e-51 206.5 218 55.5
AUR62044517 Chenopodium quinoa HOM05D003462 ORTHO05D003946 2.4e-51 206.5 220 57.3
A07p39860 Brassica napus HOM05D003462 ORTHO05D003946 3.1e-51 206.1 218 56.0
BraA07t31532Z Brassica rapa HOM05D003462 ORTHO05D003946 3.1e-51 206.1 218 56.0
THA.LOC104812124 Tarenaya hassleriana HOM05D003462 ORTHO05D003946 3.1e-51 206.1 218 54.6
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 5.3e-51 205.3 218 55.5
BolC6t39846H Brassica oleracea HOM05D003462 ORTHO05D003946 5.3e-51 205.3 218 55.5
AT1G73990 Arabidopsis thaliana HOM05D003462 ORTHO05D003946 9.0e-51 204.5 218 54.6
BcaC08g46829 Brassica carinata HOM05D003462 ORTHO05D003946 9.0e-51 204.5 218 56.0
Carub.0002s2077 Capsella rubella HOM05D003462 ORTHO05D003946 9.0e-51 204.5 218 55.0
HPP92_017961 Vanilla planifolia HOM05D003462 ORTHO05D003946 1.5e-50 203.8 218 54.1
TPR.G15309 Trifolium pratense HOM05D003462 ORTHO05D003946 2.0e-50 203.4 218 53.2
Thhalv10018225m.g Eutrema salsugineum HOM05D003462 ORTHO05D003946 3.4e-50 202.6 218 54.6
Sp5g29190 Schrenkiella parvula HOM05D003462 ORTHO05D003946 9.9e-50 201.1 218 55.0
CARHR067120 Cardamine hirsuta HOM05D003462 ORTHO05D003946 3.2e-48 196.1 218 53.2
SalBow1G4644 Salvia bowleyana HOM05D003462 ORTHO05D003946 4.2e-48 195.7 218 52.3
SEGI_03657 Sequoiadendron giganteum HOM05D003462 ORTHO05D003946 9.3e-48 194.5 224 56.2
Zm00001eb189850 Zea mays HOM05D003462 ORTHO05D003946 2.7e-47 193.0 218 51.8
Hund09973 Selenicereus undatus HOM05D003462 ORTHO05D003946 4.6e-47 192.2 207 50.7
unitig_22.g6154 Utricularia gibba HOM05D003462 ORTHO05D003946 4.6e-47 192.2 176 61.9
ECA246G0130 Erigeron canadensis HOM05D003462 ORTHO05D003946 6.0e-47 191.8 191 58.1
CSS0030762 Camellia sinensis var. sinensis HOM05D003462 ORTHO05D003946 3.0e-46 189.5 218 56.0
Migut.D01480 Erythranthe guttata HOM05D003462 ORTHO05D003946 3.0e-46 189.5 218 51.4
arahy.Tifrunner.gnm1.ann1.MSU6B8 Arachis hypogaea HOM05D003462 ORTHO05D003946 3.9e-46 189.1 197 57.4
ATR0691G062 Amborella trichopoda HOM05D003462 ORTHO05D003946 1.5e-45 187.2 218 50.9
arahy.Tifrunner.gnm1.ann1.V9YTQ9 Arachis hypogaea HOM05D003462 ORTHO05D003946 2.5e-45 186.4 197 56.3
Lsat_1_v5_gn_5_24760 Lactuca sativa HOM05D003462 ORTHO05D003946 2.8e-44 183.0 217 53.0
Lsat_1_v5_gn_5_24941 Lactuca sativa HOM05D003462 ORTHO05D003946 3.7e-44 182.6 217 53.0
ATR0691G201 Amborella trichopoda HOM05D003462 ORTHO05D003946 6.2e-44 181.8 217 51.6
ECA246G4431 Erigeron canadensis HOM05D003462 ORTHO05D003946 6.2e-44 181.8 214 51.9
Nitab4.5_0002805g0140 Nicotiana tabacum HOM05D003462 ORTHO05D003946 9.0e-43 177.9 134 70.1
Dinv38623 Davidia involucrata HOM05D003462 ORTHO05D003946 1.5e-42 177.2 209 53.6
Lj1g0015888 Lotus japonicus HOM05D003462 ORTHO05D003946 7.6e-42 174.9 129 70.5
SGA_v2.0_scaffold171G38939 Striga asiatica HOM05D003462 ORTHO05D003946 2.2e-41 173.3 219 49.8
FAN08G2364 Fragaria x ananassa HOM05D003462 ORTHO05D003946 2.9e-41 172.9 218 50.9
HanXRQChr05g0157891 Helianthus annuus HOM05D003462 ORTHO05D003946 1.4e-40 170.6 218 48.2
SMO147G0360 Selaginella moellendorffii HOM05D003462 ORTHO05D003946 2.4e-40 169.9 196 53.1
QL10p021433 Quercus lobata HOM05D003462 ORTHO05D003946 3.2e-40 169.5 129 70.5
Nitab4.5_0000646g0270 Nicotiana tabacum HOM05D003462 ORTHO05D003946 1.8e-38 163.7 218 50.5
AUR62036912 Chenopodium quinoa HOM05D003462 ORTHO05D003946 8.7e-38 161.4 131 68.7
AagrBONN_evm.TU.Sc2ySwM_117.3359 Anthoceros agrestis HOM05D003462 ORTHO05D003946 4.3e-37 159.1 162 57.4
GSVIVG01008177001 Vitis vinifera HOM05D003462 ORTHO05D003946 6.2e-36 155.2 114 71.1
Mapoly0008s0093 Marchantia polymorpha HOM05D003462 ORTHO05D003946 3.4e-34 149.4 191 48.7
Pp3c3_13550 Physcomitrium patens HOM05D003462 ORTHO05D003946 1.1e-32 144.4 153 53.6
Pp3c3_13555 Physcomitrium patens HOM05D003462 ORTHO05D003946 1.1e-32 144.4 153 53.6
HanXRQChr05g0157881 Helianthus annuus HOM05D003462 ORTHO05D003946 2.7e-31 139.8 161 54.7
Actinidia27195 Actinidia chinensis HOM05D003462 ORTHO05D003946 6.0e-31 138.7 203 47.8
Medtr4g112820 Medicago truncatula HOM05D003462 ORTHO05D003946 2.3e-30 136.7 108 63.0
Rhsim08G0140500 Rhododendron simsii HOM05D003462 ORTHO05D003946 8.7e-30 134.8 115 63.5
TPR.G35192 Trifolium pratense HOM05D003462 ORTHO05D003946 1.5e-29 134.0 103 67.0
AUR62039689 Chenopodium quinoa HOM05D003462 ORTHO05D003946 2.5e-29 133.3 149 56.4
AagrBONN_evm.TU.Sc2ySwM_368.89 Anthoceros agrestis HOM05D003462 ORTHO05D003946 3.7e-28 129.4 152 52.0
Cre10.g444550 Chlamydomonas reinhardtii HOM05D003462 ORTHO05D003946 6.9e-27 125.2 159 48.4
Prupe.5G211500 Prunus persica HOM05D003462 ORTHO05D003946 7.6e-26 121.7 87 72.4
Cc00_g05440 Coffea canephora HOM05D003462 ORTHO05D003946 1.9e-24 117.1 233 39.1
RcHm_v2.0_Chr2g0126491 Rosa chinensis HOM05D003462 ORTHO05D003946 4.2e-24 115.9 174 48.3
FAN13G0008 Fragaria x ananassa HOM05D003462 ORTHO05D003946 9.3e-24 114.8 87 69.0
unitig_749.g14105 Utricularia gibba HOM05D003462 ORTHO05D003946 7.9e-23 111.7 87 66.7
PGSC0003DMG401024517 Solanum tuberosum HOM05D003462 ORTHO05D003946 3.0e-22 109.8 129 52.7
Medtr4g114810 Medicago truncatula HOM05D003462 ORTHO05D003946 8.7e-22 108.2 162 46.9
Medtr8g022500 Medicago truncatula HOM05D003462 ORTHO05D003946 4.5e-18 95.9 142 48.6
Medtr8g022470 Medicago truncatula HOM05D003462 ORTHO05D003946 1.7e-17 94.0 102 53.9
RcHm_v2.0_Chr7g0184031 Rosa chinensis HOM05D003462 ORTHO05D003946 1.1e-16 91.3 116 49.1
Medtr4g134260 Medicago truncatula HOM05D003462 ORTHO05D003946 1.4e-16 90.9 97 51.5
Cfa017727 Carpinus fangiana HOM05D003462 ORTHO05D003946 1.6e-15 87.4 134 41.8
RcHm_v2.0_Chr3g0495421 Rosa chinensis HOM05D003462 ORTHO05D003946 1.4e-14 84.3 116 45.7
unitig_749.g14106 Utricularia gibba HOM05D003462 ORTHO05D003946 1.8e-14 84.0 126 46.8
FvH4_5g13112 Fragaria vesca HOM05D003462 ORTHO05D003946 2.2e-12 77.0 66 56.1
RcHm_v2.0_Chr2g0152701 Rosa chinensis HOM05D003462 ORTHO05D003946 2.8e-12 76.6 88 54.5
CsaV3_1G003220 Cucumis sativus L. HOM05D003462 ORTHO05D003946 3.7e-12 76.3 56 71.4
ATR0559G066 Amborella trichopoda HOM05D003462 ORTHO05D003946 4.8e-12 75.9 83 45.8
FAN18G1391 Fragaria x ananassa HOM05D003462 ORTHO05D003946 4.8e-12 75.9 118 44.1
Medtr4g133130 Medicago truncatula HOM05D000348 ORTHO05D003946 1.1e-11 74.7 140 38.6
Medtr4g123500 Medicago truncatula HOM05D003462 ORTHO05D003946 1.8e-11 73.9 130 39.2
HanXRQChr09g0240321 Helianthus annuus HOM05D003462 ORTHO05D003946 5.3e-11 72.4 72 54.2
HanXRQChr09g0240811 Helianthus annuus HOM05D003462 ORTHO05D003946 3.4e-10 69.7 72 52.8
ECA233G4504 Erigeron canadensis HOM05D003462 ORTHO05D003946 2.9e-09 66.6 48 66.7
Cre06.g267700 Chlamydomonas reinhardtii HOM05D003462 ORTHO05D003946 3.8e-09 66.2 128 32.8
Psat4g045480 Pisum sativum HOM05D003462 ORTHO05D003946 5.0e-09 65.9 57 57.9
Medtr4g130360 Medicago truncatula HOM05D003462 ORTHO05D003946 1.9e-08 63.9 74 54.1
Os02g0728100 Oryza sativa ssp. japonica HOM05D003462 ORTHO05D003946 1.9e-08 63.9 57 59.6
Medtr5g025810 Medicago truncatula HOM05D003462 ORTHO05D003946 6.1e-07 58.9 160 32.5
Medtr5g083100 Medicago truncatula HOM05D003462 ORTHO05D003946 6.1e-07 58.9 61 54.1
ECA233G4583 Erigeron canadensis HOM05D003462 ORTHO05D003946 3.0e-06 56.6 57 52.6
Ca_29357_v3 Cicer arietinum L. HOM05D003462 ORTHO05D003946 5.2e-06 55.8 125 30.4
Medtr4g130550 Medicago truncatula HOM05D003462 ORTHO05D003946 6.7e-06 55.5 108 36.1


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