Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043437 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 8.1e-129 463.8 238 100.0
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.1e-101 373.6 239 80.3
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 7.0e-96 354.4 237 79.3
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 3.4e-95 352.1 237 79.3
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 8.5e-94 347.4 239 73.6
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 6.1e-92 341.3 238 73.1
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 1.4e-91 340.1 232 75.0
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 6.7e-91 337.8 224 80.8
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 5.7e-90 334.7 238 69.7
CSS0016783 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.3e-89 333.6 201 86.6
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 1.3e-89 333.6 237 70.0
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 1.7e-89 333.2 238 69.7
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 1.7e-89 333.2 238 71.4
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 3.7e-89 332.0 239 69.0
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 3.7e-89 332.0 239 69.0
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 8.2e-89 330.9 238 71.8
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 8.2e-89 330.9 238 70.6
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 1.4e-88 330.1 238 69.7
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 1.4e-88 330.1 239 71.1
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 1.8e-88 329.7 238 71.4
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 7.0e-88 327.8 237 70.0
TAR623G1303 Trochodendron aralioides HOM05D003450 ORTHO05D004150 9.1e-88 327.4 242 67.8
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 7.7e-87 324.3 239 68.2
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 1.3e-86 323.6 238 67.6
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 2.2e-86 322.8 238 70.6
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 3.8e-86 322.0 237 69.6
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 3.8e-86 322.0 239 70.7
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 3.8e-86 322.0 241 70.1
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 1.9e-85 319.7 238 68.5
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 1.9e-85 319.7 238 68.1
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 2.5e-85 319.3 238 70.6
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 3.2e-85 318.9 238 67.2
Oeu059564.1 Olea europaea HOM05D003450 ORTHO05D004150 5.5e-85 318.2 237 66.7
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 6.1e-84 314.7 238 68.1
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 1.4e-83 313.5 237 69.6
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 2.3e-83 312.8 238 66.4
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 5.2e-83 311.6 237 66.7
Migut.E01197 Erythranthe guttata HOM05D003450 ORTHO05D004150 1.5e-82 310.1 235 65.5
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 1.5e-82 310.1 238 67.6
PGSC0003DMG400012328 Solanum tuberosum HOM05D003450 ORTHO05D004150 1.5e-82 310.1 237 69.6
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 2.0e-82 309.7 237 68.8
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 2.0e-82 309.7 238 66.0
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 2.6e-82 309.3 237 67.9
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 3.3e-82 308.9 238 62.6
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 3.3e-82 308.9 238 62.6
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 3.3e-82 308.9 238 64.3
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 4.4e-82 308.5 238 65.5
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 5.7e-82 308.1 238 66.0
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 5.7e-82 308.1 239 65.3
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 5.7e-82 308.1 237 69.2
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 5.7e-82 308.1 238 67.6
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 5.7e-82 308.1 238 65.5
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 7.5e-82 307.8 238 67.6
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 1.3e-81 307.0 237 68.4
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 2.2e-81 306.2 238 65.5
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 2.8e-81 305.8 237 67.5
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 6.3e-81 304.7 238 66.0
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 6.3e-81 304.7 239 65.3
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.1e-80 303.9 240 65.8
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 1.4e-80 303.5 239 65.3
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.8e-80 303.1 238 66.0
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 2.4e-80 302.8 238 62.2
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 2.4e-80 302.8 238 62.2
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 2.4e-80 302.8 237 67.1
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 3.1e-80 302.4 240 65.0
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 3.1e-80 302.4 241 63.5
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 5.3e-80 301.6 236 65.7
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 9.1e-80 300.8 238 65.5
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 2.0e-79 299.7 239 64.4
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 3.5e-79 298.9 238 65.1
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 4.5e-79 298.5 238 65.1
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 5.9e-79 298.1 239 64.4
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 1.0e-78 297.4 238 64.7
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 2.2e-78 296.2 238 62.2
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 2.2e-78 296.2 237 62.4
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 1.1e-77 293.9 239 61.9
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 5.5e-77 291.6 237 65.4
Sc07g0005180 Simmondsia chinensis HOM05D003450 ORTHO05D004150 2.7e-76 289.3 238 62.6
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 6.1e-76 288.1 238 60.5
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 1.2e-74 283.9 241 61.0
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 7.5e-74 281.2 258 63.6
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 9.8e-74 280.8 239 60.7
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 2.2e-73 279.6 236 60.6
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 6.3e-73 278.1 239 59.8
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 6.3e-73 278.1 239 59.8
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 1.8e-72 276.6 239 60.3
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 1.8e-72 276.6 238 59.7
Solyc02g075610.4 Solanum lycopersicum HOM05D003450 ORTHO05D004150 2.4e-72 276.2 237 62.9
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 2.4e-72 276.2 236 58.1
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 4.1e-72 275.4 239 59.0
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 4.1e-72 275.4 239 59.0
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 1.2e-71 273.9 240 59.2
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 3.5e-71 272.3 239 59.0
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 3.5e-71 272.3 239 59.0
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 5.9e-71 271.6 241 57.3
Lj8A217T73 Lonicera japonica HOM05D003450 ORTHO05D004150 5.9e-71 271.6 239 61.9
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 1.0e-70 270.8 239 59.0
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 1.3e-70 270.4 239 57.7
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 1.7e-70 270.0 240 57.5
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 1.7e-70 270.0 240 57.9
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 1.7e-70 270.0 240 57.9
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 2.3e-70 269.6 240 58.8
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 2.3e-70 269.6 241 56.8
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 2.9e-70 269.2 239 55.6
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 3.8e-70 268.9 239 58.6
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 5.0e-70 268.5 240 58.8
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 5.0e-70 268.5 241 58.1
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 5.0e-70 268.5 239 57.7
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 8.6e-70 267.7 236 58.5
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 1.1e-69 267.3 239 58.2
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 1.1e-69 267.3 231 59.7
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 1.5e-69 266.9 241 58.1
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.9e-69 266.5 238 56.7
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 2.5e-69 266.2 239 58.2
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 4.2e-69 265.4 238 58.0
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 6.1e-68 261.5 242 56.6
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 4.9e-65 251.9 236 54.2
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 9.5e-61 237.7 200 66.0
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 6.1e-60 235.0 239 51.5
Gohir.D07G231100 Gossypium hirsutum HOM05D003450 ORTHO05D004150 4.0e-59 232.3 180 67.8
Hma1.2p1_1172F.1_g263680 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 7.5e-58 228.0 170 67.1
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 6.4e-57 224.9 240 48.3
RcHm_v2.0_Chr2g0173251 Rosa chinensis HOM05D003450 ORTHO05D004150 2.4e-56 223.0 232 54.3
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 5.4e-56 221.9 239 50.2
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 7.0e-56 221.5 238 45.0
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 1.6e-55 220.3 238 43.7
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 4.6e-55 218.8 238 45.0
MBI14_g35409_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 2.5e-53 213.0 239 50.6
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 1.9e-48 196.8 240 43.8
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 2.4e-48 196.4 244 44.7
Atru.chr6.2426 Acer truncatum HOM05D003450 ORTHO05D004150 4.9e-41 172.2 124 70.2
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 4.6e-39 165.6 250 40.8
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 4.6e-39 165.6 253 39.5
CSS0015164 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 4.3e-37 159.1 94 87.2
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 2.0e-34 150.2 248 37.1
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 2.0e-34 150.2 251 38.6
Gohir.D04G058400 Gossypium hirsutum HOM05D003450 ORTHO05D004150 1.6e-31 140.6 100 71.0
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 3.0e-30 136.3 90 67.8
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 3.0e-30 136.3 99 67.7
MBI14_g31103_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 6.6e-30 135.2 190 43.7
Gohir.D04G058450 Gossypium hirsutum HOM05D003450 ORTHO05D004150 8.1e-28 128.3 94 68.1
Atru.chr6.2427 Acer truncatum HOM05D003450 ORTHO05D004150 5.3e-27 125.6 93 68.8
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 5.6e-21 105.5 127 43.3
TPR.G33285 Trifolium pratense HOM05D003450 ORTHO05D004150 2.6e-18 96.7 71 67.6
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 1.9e-16 90.5 60 73.3
CDE09G0700 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 2.1e-15 87.0 99 45.5
Aqoxy2G03587 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 3.5e-15 86.3 75 58.7
MCO05G130 Micromonas commoda HOM05D003450 ORTHO05D004150 1.8e-14 84.0 254 28.3
CiPaw.03G045400 Carya illinoinensis HOM05D003450 ORTHO05D004150 1.1e-13 81.3 67 61.2
CDE09G0158 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 1.6e-12 77.4 93 48.4
BcaC03g17544 Brassica carinata HOM05D003450 ORTHO05D004150 1.1e-11 74.7 92 50.0
Sopen02g029170 Solanum pennellii HOM05D003450 ORTHO05D004150 1.1e-11 74.7 94 47.9


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