Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 4.1e-162 574.7 295 100.0
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.2e-161 573.2 295 99.7
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 8.5e-152 540.4 295 93.2
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 5.7e-148 527.7 295 90.5
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 2.2e-144 515.8 295 89.2
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.1e-142 509.2 295 86.4
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 4.8e-139 498.0 341 77.1
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 2.2e-136 489.2 295 83.4
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 8.5e-136 487.3 295 82.0
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 1.5e-135 486.5 299 82.9
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 3.2e-135 485.3 295 82.0
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 2.1e-134 482.6 295 81.7
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 3.6e-134 481.9 297 82.8
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 2.3e-133 479.2 295 81.7
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 4.0e-133 478.4 300 81.3
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 8.8e-133 477.2 295 80.7
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 5.7e-132 474.6 295 80.7
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 1.1e-130 470.3 305 78.4
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 1.4e-130 469.9 303 79.2
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 3.1e-130 468.8 305 78.7
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 3.1e-130 468.8 300 81.0
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 1.2e-129 466.8 295 77.3
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 1.6e-129 466.5 306 77.8
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.5e-129 465.3 300 81.0
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.5e-129 465.3 300 80.7
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 5.9e-129 464.5 300 80.7
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.9e-129 464.5 300 80.7
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 7.7e-129 464.2 300 80.3
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 1.3e-128 463.4 295 79.7
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.3e-128 463.4 300 80.0
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 1.7e-128 463.0 302 77.8
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 1.7e-128 463.0 312 77.6
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 1.9e-127 459.5 303 77.9
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 7.2e-127 457.6 298 78.2
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 9.4e-127 457.2 300 76.7
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 1.6e-126 456.4 301 78.7
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 1.6e-126 456.4 314 77.4
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 1.0e-125 453.8 297 77.8
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 1.0e-125 453.8 312 76.3
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 2.3e-125 452.6 294 79.3
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 1.5e-124 449.9 331 71.9
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 1.5e-124 449.9 331 71.9
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 3.4e-124 448.7 309 75.7
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 4.4e-124 448.4 274 82.8
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 7.5e-124 447.6 301 77.4
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 7.5e-124 447.6 308 74.4
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 9.8e-124 447.2 274 82.1
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 9.8e-124 447.2 299 76.9
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 1.7e-123 446.4 304 74.0
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 8.3e-123 444.1 273 80.2
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 1.1e-122 443.7 302 77.2
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 1.8e-122 443.0 301 76.1
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 2.4e-122 442.6 286 77.3
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 5.4e-122 441.4 273 79.1
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.2e-121 440.3 269 80.3
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 1.2e-121 440.3 300 75.7
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 4.5e-121 438.3 312 73.7
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 5.9e-121 438.0 302 75.2
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 5.9e-121 438.0 302 75.2
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 7.7e-121 437.6 296 74.7
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.7e-120 436.4 301 77.1
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 2.3e-120 436.0 310 74.2
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 2.3e-120 436.0 271 78.6
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 3.8e-120 435.3 295 75.3
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 5.5e-119 431.4 284 77.5
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 2.8e-118 429.1 306 70.6
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 2.8e-118 429.1 302 74.8
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 1.8e-117 426.4 306 71.6
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 1.8e-117 426.4 305 72.8
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 3.0e-117 425.6 306 71.2
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 4.0e-117 425.2 306 70.6
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 4.0e-117 425.2 305 72.1
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 5.2e-117 424.9 307 72.0
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 8.9e-117 424.1 306 70.6
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 1.2e-116 423.7 306 70.3
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 2.0e-116 422.9 306 70.6
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 2.0e-116 422.9 306 70.6
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 3.4e-116 422.2 306 70.6
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 3.4e-116 422.2 306 69.9
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 5.7e-116 421.4 304 72.4
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 9.8e-116 420.6 306 69.3
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 2.2e-115 419.5 295 71.2
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 2.8e-115 419.1 307 69.4
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 3.7e-115 418.7 296 71.3
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 3.7e-115 418.7 305 71.8
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.0e-112 410.6 314 69.7
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 1.7e-112 409.8 335 64.8
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 2.9e-112 409.1 319 70.2
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 1.9e-111 406.4 273 77.7
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 5.6e-111 404.8 288 71.2
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 6.1e-110 401.4 336 65.2
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 6.6e-104 381.3 306 66.0
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 7.3e-103 377.9 297 68.4
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.4e-101 373.6 220 85.0
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 2.4e-98 362.8 320 62.2
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 3.3e-95 352.4 309 61.5
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.8e-93 346.7 272 65.4
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 4.6e-89 332.0 272 62.5
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 3.9e-88 328.9 233 75.5
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 2.0e-84 316.6 199 80.9
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 2.2e-83 313.2 278 59.4
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 5.4e-82 308.5 202 79.2
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 1.4e-77 293.9 254 64.2
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 2.7e-73 279.6 295 51.2
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 1.3e-72 277.3 209 71.8
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.5e-63 247.3 263 48.3
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 3.5e-57 226.1 281 42.7
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 1.8e-56 223.8 192 64.1
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.2e-52 211.1 155 73.5
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 1.1e-50 204.5 312 39.1
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 1.3e-48 197.6 299 37.8
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.8e-46 189.9 289 46.0
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 6.5e-43 178.7 219 44.3
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 4.2e-42 176.0 228 43.4
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 3.4e-36 156.4 116 69.8
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 2.0e-31 140.6 285 35.4
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.5e-28 131.0 88 77.3
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 7.4e-23 112.1 135 51.9
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 4.1e-21 106.3 74 68.9
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 2.0e-20 104.0 93 59.1
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.0e-16 91.7 78 60.3
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 1.9e-10 70.9 79 57.0
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 2.0e-07 60.8 57 45.6


User provided reference genes

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