Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 7.6e-236 820.1 406 100.0
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 8.7e-224 780.0 406 95.8
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 2.0e-183 646.0 408 79.2
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 8.3e-182 640.6 405 79.5
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 1.7e-174 616.3 448 71.4
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 1.5e-167 593.2 449 69.0
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.4e-165 586.6 406 69.2
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 7.0e-165 584.3 405 71.9
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 3.5e-164 582.0 407 70.5
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 3.9e-163 578.6 406 71.7
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 8.6e-163 577.4 406 68.2
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 1.5e-162 576.6 406 69.2
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 1.9e-162 576.2 406 70.9
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.5e-162 575.9 406 69.5
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 3.3e-162 575.5 406 71.4
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 3.3e-162 575.5 406 69.5
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 9.5e-162 573.9 406 69.5
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 4.7e-161 571.6 407 68.6
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 6.2e-161 571.2 406 69.2
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 8.1e-161 570.9 407 68.8
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.3e-160 569.3 406 69.0
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 4.0e-160 568.5 406 70.9
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 6.8e-160 567.8 406 70.0
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 1.7e-158 563.1 406 68.7
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 2.9e-158 562.4 406 69.2
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 4.9e-158 561.6 421 66.3
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 4.9e-158 561.6 407 67.3
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 8.3e-158 560.8 406 68.2
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 1.4e-157 560.1 411 67.4
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 1.9e-157 559.7 406 69.5
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 1.9e-157 559.7 408 67.2
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 2.4e-157 559.3 407 68.8
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 2.4e-157 559.3 408 68.9
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 3.2e-157 558.9 411 67.4
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 4.1e-157 558.5 407 67.1
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 5.4e-157 558.1 406 67.5
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 6.0e-156 554.7 406 68.0
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 1.0e-155 553.9 406 66.7
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 1.7e-155 553.1 406 69.7
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 3.0e-155 552.4 407 68.6
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 6.6e-155 551.2 407 68.6
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 2.5e-154 549.3 406 68.0
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 4.3e-154 548.5 408 67.9
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 5.6e-154 548.1 406 67.7
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 9.5e-154 547.4 400 68.2
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 1.2e-153 547.0 407 67.8
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 1.8e-152 543.1 408 66.4
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 2.6e-151 539.3 406 66.7
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 2.2e-150 536.2 418 64.6
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 1.1e-149 533.9 413 65.9
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 3.2e-149 532.3 408 65.7
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 3.2e-149 532.3 402 65.4
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 9.2e-149 530.8 412 65.3
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 9.2e-149 530.8 428 63.3
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 4.6e-148 528.5 409 65.3
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 1.7e-147 526.6 399 64.7
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 2.3e-147 526.2 414 65.0
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 3.0e-147 525.8 402 65.7
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 8.7e-147 524.2 407 64.9
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.5e-146 522.7 392 65.8
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 9.6e-146 520.8 413 64.4
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 9.6e-146 520.8 408 63.7
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 2.1e-145 519.6 408 64.2
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 3.6e-145 518.8 407 62.2
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 3.6e-145 518.8 407 63.6
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 4.7e-145 518.5 408 63.5
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 6.2e-145 518.1 408 65.7
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.1e-144 517.3 410 65.4
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 3.1e-144 515.8 408 65.0
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 4.0e-144 515.4 408 65.4
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 5.2e-144 515.0 409 64.1
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 6.9e-144 514.6 410 65.6
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 5.8e-143 511.5 436 61.9
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 5.8e-143 511.5 436 61.9
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 7.6e-143 511.1 400 64.0
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 4.9e-142 508.4 406 62.3
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 6.4e-142 508.1 406 61.6
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.4e-141 506.9 406 61.3
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 4.2e-141 505.4 410 65.1
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 7.1e-141 504.6 409 65.0
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 7.1e-141 504.6 409 65.0
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 4.6e-140 501.9 365 67.9
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 7.8e-140 501.1 411 63.0
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 3.0e-139 499.2 430 60.9
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 3.3e-138 495.7 397 61.0
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 5.6e-138 495.0 411 62.3
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 5.6e-138 495.0 399 63.7
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 2.8e-137 492.7 482 55.4
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 2.8e-137 492.7 346 69.1
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 2.8e-137 492.7 400 63.2
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 3.6e-137 492.3 406 60.1
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 6.2e-137 491.5 413 59.3
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 4.0e-136 488.8 407 61.4
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 6.9e-136 488.0 368 66.6
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 1.6e-132 476.9 409 61.6
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 2.5e-130 469.5 388 60.6
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 5.6e-130 468.4 400 59.2
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 9.6e-130 467.6 408 57.6
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 1.3e-129 467.2 402 60.0
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 4.8e-129 465.3 400 59.2
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.2e-127 460.7 408 58.8
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.8e-127 458.4 262 86.6
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 5.5e-125 451.8 334 66.5
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 9.3e-125 451.1 402 57.5
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 4.6e-124 448.7 400 58.5
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.0e-123 447.6 231 93.5
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.1e-123 445.3 272 82.0
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.7e-123 444.9 257 84.8
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 5.6e-122 441.8 407 58.2
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 2.1e-121 439.9 402 56.7
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 2.8e-121 439.5 404 56.7
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 6.2e-121 438.3 365 61.1
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 2.4e-120 436.4 398 55.5
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 3.1e-120 436.0 388 57.5
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 1.5e-119 433.7 398 55.3
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.0e-118 431.0 403 56.3
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 8.4e-118 427.9 391 56.5
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 3.2e-117 426.0 405 56.5
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 5.5e-117 425.2 402 56.0
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 3.5e-116 422.5 405 56.5
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 2.3e-115 419.9 386 56.5
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 3.9e-115 419.1 318 63.8
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 4.5e-111 405.6 406 54.7
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 8.5e-110 401.4 408 55.9
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 3.2e-109 399.4 403 54.1
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 9.4e-109 397.9 403 53.6
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 4.6e-108 395.6 403 53.3
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 3.0e-107 392.9 329 59.9
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 6.7e-107 391.7 398 53.3
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 9.7e-106 387.9 362 55.5
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 2.2e-105 386.7 253 72.7
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 4.8e-105 385.6 322 59.6
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 5.3e-104 382.1 359 54.9
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 5.3e-104 382.1 359 54.9
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 1.2e-103 380.9 262 74.8
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 1.2e-103 380.9 359 54.6
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 5.1e-99 365.5 355 54.9
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 3.1e-96 356.3 274 62.4
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 3.5e-95 352.8 391 48.1
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.4e-93 347.4 340 55.6
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 1.0e-91 341.3 341 54.3
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 1.3e-81 307.8 400 43.2
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.7e-81 307.4 253 58.9
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 4.1e-80 302.8 269 58.7
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 7.0e-80 302.0 398 43.0
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 1.1e-77 294.7 400 41.5
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 1.2e-76 291.2 371 46.1
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 7.7e-71 271.9 283 54.1
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 7.2e-69 265.4 409 39.1
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 4.9e-65 252.7 196 64.3
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.5e-61 240.4 158 70.3
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 2.2e-49 200.7 455 32.5
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 2.1e-44 184.1 134 72.4
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 1.1e-43 181.8 139 67.6
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 4.1e-40 169.9 134 67.2
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 9.2e-40 168.7 369 34.7
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 5.2e-35 152.9 307 33.2
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 7.6e-34 149.1 134 57.5
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.7e-33 147.9 111 60.4
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 6.6e-30 136.0 280 34.6
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 8.7e-30 135.6 390 31.0
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 2.5e-29 134.0 280 33.9
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 1.6e-23 114.8 331 26.6
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 6.0e-23 112.8 84 64.3
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 2.3e-22 110.9 67 80.6
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.9e-21 107.8 98 58.2
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 3.2e-16 90.5 74 60.8
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 3.0e-14 84.0 108 44.4
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.1e-11 73.9 68 55.9
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 6.5e-09 66.2 58 63.8
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 8.4e-09 65.9 56 60.7
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 1.4e-08 65.1 44 75.0
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 2.3e-06 57.8 135 33.3


User provided reference genes

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