Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 9.9e-40 166.4 88 100.0
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 9.9e-40 166.4 88 100.0
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 4.8e-34 147.5 88 87.5
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 6.2e-34 147.1 88 85.2
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 1.1e-33 146.4 89 87.6
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 5.8e-32 140.6 88 79.5
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 7.6e-32 140.2 88 79.5
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 1.3e-31 139.4 88 79.5
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 1.3e-31 139.4 88 79.5
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 2.9e-31 138.3 88 79.5
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 6.4e-31 137.1 88 78.4
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 8.4e-31 136.7 88 77.3
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 1.9e-30 135.6 88 76.1
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 3.2e-30 134.8 84 78.6
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 5.5e-30 134.0 88 76.1
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 9.3e-30 133.3 88 77.3
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 3.5e-29 131.3 88 77.3
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 4.6e-29 131.0 84 75.0
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 4.6e-29 131.0 90 76.7
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 1.0e-28 129.8 88 73.9
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 1.8e-28 129.0 87 73.6
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 3.9e-28 127.9 88 73.9
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 3.9e-28 127.9 88 73.9
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 5.1e-28 127.5 88 72.7
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 8.7e-28 126.7 88 71.6
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 1.1e-27 126.3 89 77.5
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 3.3e-27 124.8 87 73.6
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 4.3e-27 124.4 88 70.5
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 4.3e-27 124.4 88 71.6
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 9.6e-27 123.2 89 73.0
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 9.6e-27 123.2 88 70.5
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 9.6e-27 123.2 103 71.8
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 4.8e-26 120.9 81 72.8
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 1.8e-25 119.0 79 74.7
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 3.1e-25 118.2 88 65.9
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 5.3e-25 117.5 101 61.4
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 6.9e-25 117.1 81 71.6
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 9.0e-25 116.7 77 76.6
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 9.0e-25 116.7 81 74.1
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 1.2e-24 116.3 88 65.9
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 4.5e-24 114.4 81 72.8
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 1.0e-23 113.2 81 71.6
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 1.1e-22 109.8 81 65.4
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 2.5e-22 108.6 79 73.4
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 3.2e-22 108.2 84 63.1
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 5.5e-22 107.5 84 60.7
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 9.3e-22 106.7 84 61.9
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 9.3e-22 106.7 84 61.9
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 1.2e-21 106.3 84 61.9
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 1.2e-21 106.3 84 59.5
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 2.1e-21 105.5 84 59.5
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 2.1e-21 105.5 80 67.5
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 3.5e-21 104.8 84 59.5
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 3.5e-21 104.8 84 60.7
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 3.5e-21 104.8 85 58.8
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 6.1e-21 104.0 81 64.2
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 1.0e-20 103.2 84 59.5
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 1.0e-20 103.2 84 59.5
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 1.8e-20 102.4 82 63.4
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 2.3e-20 102.1 84 59.5
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 1.5e-19 99.4 87 59.8
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 4.3e-19 97.8 69 73.9
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 1.3e-18 96.3 79 58.2
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 3.7e-18 94.7 84 54.8
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 1.1e-17 93.2 84 53.6
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 1.2e-16 89.7 129 43.4
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 2.6e-16 88.6 117 46.2
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 4.5e-16 87.8 86 45.3
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 8.5e-15 83.6 85 58.8
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 3.6e-13 78.2 80 51.2
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 3.6e-13 78.2 85 50.6
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 2.0e-11 72.4 48 70.8
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 2.5e-11 72.0 42 81.0
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 1.4e-09 66.2 50 66.0
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 1.4e-09 66.2 48 72.9
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 1.8e-09 65.9 49 63.3
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 3.4e-08 61.6 50 62.0
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 3.8e-07 58.2 63 49.2


User provided reference genes

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