Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 5.6e-82 307.8 179 100.0
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 9.7e-50 200.7 179 66.5
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 3.4e-47 192.2 179 58.7
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 4.5e-47 191.8 179 60.3
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 5.9e-47 191.4 179 66.5
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 1.0e-46 190.7 180 60.6
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 1.7e-46 189.9 178 60.7
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 2.9e-46 189.1 179 58.7
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 2.9e-46 189.1 179 60.9
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 2.9e-46 189.1 142 71.1
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 8.5e-46 187.6 179 59.2
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 1.9e-45 186.4 179 60.9
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 1.9e-45 186.4 177 58.8
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 1.9e-45 186.4 184 58.2
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 2.5e-45 186.0 169 62.1
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 3.2e-45 185.7 143 77.6
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 3.2e-45 185.7 89 95.5
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 4.2e-45 185.3 179 60.9
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 5.5e-45 184.9 179 62.0
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 7.2e-45 184.5 142 66.9
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.2e-44 183.7 180 58.3
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.2e-44 183.7 180 58.3
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 1.2e-44 183.7 181 66.9
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 1.6e-44 183.3 180 58.3
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.6e-44 183.3 179 59.8
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 1.6e-44 183.3 89 93.3
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 2.1e-44 183.0 89 93.3
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 3.6e-44 182.2 89 93.3
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 3.6e-44 182.2 89 93.3
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 3.6e-44 182.2 179 57.5
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 4.6e-44 181.8 180 60.0
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 6.1e-44 181.4 180 57.8
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 7.9e-44 181.0 89 92.1
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 1.0e-43 180.6 89 89.9
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 1.0e-43 180.6 179 65.9
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 1.4e-43 180.3 89 89.9
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 1.4e-43 180.3 89 92.1
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.8e-43 179.9 181 56.9
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 2.3e-43 179.5 179 57.5
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 3.9e-43 178.7 89 91.0
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 3.9e-43 178.7 89 91.0
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 3.9e-43 178.7 89 91.0
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 3.9e-43 178.7 89 88.8
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 3.9e-43 178.7 142 64.1
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 5.1e-43 178.3 89 89.9
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 5.1e-43 178.3 166 58.4
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 5.1e-43 178.3 171 60.2
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 6.7e-43 177.9 181 54.7
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 6.7e-43 177.9 181 54.7
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 6.7e-43 177.9 89 89.9
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 6.7e-43 177.9 89 89.9
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 6.7e-43 177.9 179 57.5
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 1.5e-42 176.8 179 57.0
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 2.0e-42 176.4 179 61.5
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 2.0e-42 176.4 193 54.4
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 2.5e-42 176.0 180 57.8
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 2.5e-42 176.0 89 88.8
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 2.5e-42 176.0 89 88.8
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 2.5e-42 176.0 89 88.8
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 3.3e-42 175.6 133 62.4
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 4.3e-42 175.3 89 88.8
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 5.7e-42 174.9 89 87.6
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 5.7e-42 174.9 179 56.4
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 5.7e-42 174.9 89 88.8
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 7.4e-42 174.5 180 56.7
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 1.3e-41 173.7 179 56.4
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 1.3e-41 173.7 89 87.6
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 1.7e-41 173.3 89 88.8
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 1.7e-41 173.3 179 56.4
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 2.2e-41 172.9 89 88.8
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 2.8e-41 172.6 86 89.5
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 2.8e-41 172.6 173 57.2
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 4.8e-41 171.8 136 64.0
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 1.1e-40 170.6 170 57.6
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 1.1e-40 170.6 179 59.8
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 1.1e-40 170.6 89 86.5
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 1.1e-40 170.6 169 58.6
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.4e-40 170.2 136 63.2
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 1.2e-39 167.2 87 83.9
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 1.2e-39 167.2 170 60.6
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 1.5e-39 166.8 80 95.0
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 3.4e-39 165.6 86 87.2
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 5.9e-39 164.9 172 65.7
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 1.7e-38 163.3 83 89.2
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 2.2e-38 162.9 170 56.5
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 3.2e-37 159.1 80 92.5
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 3.2e-37 159.1 111 69.4
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 4.7e-36 155.2 77 90.9
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 4.7e-36 155.2 79 89.9
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 7.9e-36 154.5 80 87.5
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 1.8e-35 153.3 194 55.7
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 2.6e-34 149.4 75 89.3
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 5.7e-34 148.3 89 73.0
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 9.7e-34 147.5 82 81.7
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 1.3e-33 147.1 87 72.4
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 4.8e-33 145.2 178 52.8
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 2.0e-31 139.8 181 48.6
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 2.0e-31 139.8 68 91.2
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 2.0e-31 139.8 79 77.2
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 3.2e-29 132.5 83 69.9
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 2.0e-26 123.2 159 49.7
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 9.4e-21 104.4 52 90.4
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 3.4e-18 95.9 45 95.6


User provided reference genes

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